Protein–RNA interactions for Protein: O08602

Raet1a, Retinoic acid early-inducible protein 1-alpha, mousemouse

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Raet1aO08602 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Raet1aO08602 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Raet1aO08602 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Raet1aO08602 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
Raet1aO08602 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Raet1aO08602 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Raet1aO08602 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.14
Raet1aO08602 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.14
Raet1aO08602 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Raet1aO08602 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Raet1aO08602 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Raet1aO08602 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Raet1aO08602 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Raet1aO08602 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Raet1aO08602 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Raet1aO08602 Dmtn-207ENSMUST00000228001 2437 ntBASIC15.95■□□□□ 0.14
Raet1aO08602 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC15.95■□□□□ 0.14
Raet1aO08602 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC15.95■□□□□ 0.14
Raet1aO08602 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Raet1aO08602 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Raet1aO08602 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Raet1aO08602 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC15.95■□□□□ 0.14
Raet1aO08602 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Raet1aO08602 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC15.95■□□□□ 0.14
Raet1aO08602 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Raet1aO08602 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Raet1aO08602 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Raet1aO08602 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
Raet1aO08602 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Raet1aO08602 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
Raet1aO08602 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Raet1aO08602 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
Raet1aO08602 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC15.94■□□□□ 0.14
Raet1aO08602 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC15.94■□□□□ 0.14
Raet1aO08602 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
Raet1aO08602 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Raet1aO08602 Gm26524-201ENSMUST00000192339 390 ntBASIC15.94■□□□□ 0.14
Raet1aO08602 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Raet1aO08602 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC15.94■□□□□ 0.14
Raet1aO08602 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Raet1aO08602 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Raet1aO08602 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Raet1aO08602 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
Raet1aO08602 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Raet1aO08602 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
Raet1aO08602 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
Raet1aO08602 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC15.94■□□□□ 0.14
Raet1aO08602 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Raet1aO08602 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Raet1aO08602 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Raet1aO08602 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Raet1aO08602 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
Raet1aO08602 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Raet1aO08602 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC15.93■□□□□ 0.14
Raet1aO08602 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC15.93■□□□□ 0.14
Raet1aO08602 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC15.93■□□□□ 0.14
Raet1aO08602 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Raet1aO08602 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC15.93■□□□□ 0.14
Raet1aO08602 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC15.93■□□□□ 0.14
Raet1aO08602 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Raet1aO08602 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
Raet1aO08602 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Raet1aO08602 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Raet1aO08602 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Raet1aO08602 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Raet1aO08602 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC15.93■□□□□ 0.14
Raet1aO08602 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC15.93■□□□□ 0.14
Raet1aO08602 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Raet1aO08602 Gm5828-201ENSMUST00000071842 1860 ntBASIC15.93■□□□□ 0.14
Raet1aO08602 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
Raet1aO08602 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Raet1aO08602 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
Raet1aO08602 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC15.92■□□□□ 0.14
Raet1aO08602 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Raet1aO08602 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Raet1aO08602 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Raet1aO08602 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC15.92■□□□□ 0.14
Raet1aO08602 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Raet1aO08602 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Raet1aO08602 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Raet1aO08602 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Raet1aO08602 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Raet1aO08602 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Raet1aO08602 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC15.92■□□□□ 0.14
Raet1aO08602 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Raet1aO08602 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC15.92■□□□□ 0.14
Raet1aO08602 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Raet1aO08602 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC15.92■□□□□ 0.14
Raet1aO08602 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC15.92■□□□□ 0.14
Raet1aO08602 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Raet1aO08602 Gm44544-201ENSMUST00000207052 1844 ntBASIC15.91■□□□□ 0.14
Raet1aO08602 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Raet1aO08602 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Raet1aO08602 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Raet1aO08602 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Raet1aO08602 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Raet1aO08602 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Raet1aO08602 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Raet1aO08602 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Raet1aO08602 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Retrieved 100 of 76,532 protein–RNA pairs in 21.1 ms