Protein–RNA interactions for Protein: J3QNH3

Gm21788, Predicted gene, 21788, mousemouse

Predictions only

Length 180 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm21788J3QNH3 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC15.23■□□□□ 0.03
Gm21788J3QNH3 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Gm21788J3QNH3 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Gm21788J3QNH3 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
Gm21788J3QNH3 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Gm21788J3QNH3 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
Gm21788J3QNH3 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Gm21788J3QNH3 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Gm21788J3QNH3 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Gm21788J3QNH3 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Gm21788J3QNH3 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Gm21788J3QNH3 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Gm21788J3QNH3 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC15.22■□□□□ 0.03
Gm21788J3QNH3 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC15.22■□□□□ 0.03
Gm21788J3QNH3 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Gm21788J3QNH3 Gm42642-201ENSMUST00000200683 355 ntBASIC15.22■□□□□ 0.03
Gm21788J3QNH3 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Gm21788J3QNH3 Gm5874-201ENSMUST00000096101 508 ntBASIC15.22■□□□□ 0.03
Gm21788J3QNH3 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC15.22■□□□□ 0.03
Gm21788J3QNH3 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Gm21788J3QNH3 Gm38345-201ENSMUST00000192635 1748 ntBASIC15.22■□□□□ 0.03
Gm21788J3QNH3 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Gm21788J3QNH3 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Gm21788J3QNH3 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Gm21788J3QNH3 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Gm21788J3QNH3 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Gm21788J3QNH3 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
Gm21788J3QNH3 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Gm21788J3QNH3 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Gm21788J3QNH3 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Gm21788J3QNH3 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Gm21788J3QNH3 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Gm21788J3QNH3 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Gm21788J3QNH3 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Gm21788J3QNH3 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Gm21788J3QNH3 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Gm21788J3QNH3 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
Gm21788J3QNH3 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Gm21788J3QNH3 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
Gm21788J3QNH3 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
Gm21788J3QNH3 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Gm21788J3QNH3 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Gm21788J3QNH3 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC15.21■□□□□ 0.03
Gm21788J3QNH3 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC15.21■□□□□ 0.03
Gm21788J3QNH3 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
Gm21788J3QNH3 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC15.21■□□□□ 0.03
Gm21788J3QNH3 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Gm21788J3QNH3 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC15.21■□□□□ 0.03
Gm21788J3QNH3 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Gm21788J3QNH3 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Gm21788J3QNH3 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Gm21788J3QNH3 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
Gm21788J3QNH3 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Gm21788J3QNH3 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
Gm21788J3QNH3 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Gm21788J3QNH3 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
Gm21788J3QNH3 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.02
Gm21788J3QNH3 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC15.21■□□□□ 0.02
Gm21788J3QNH3 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Gm21788J3QNH3 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.02
Gm21788J3QNH3 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
Gm21788J3QNH3 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Gm21788J3QNH3 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Gm21788J3QNH3 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Gm21788J3QNH3 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Gm21788J3QNH3 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC15.2■□□□□ 0.02
Gm21788J3QNH3 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC15.2■□□□□ 0.02
Gm21788J3QNH3 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Gm21788J3QNH3 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
Gm21788J3QNH3 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Gm21788J3QNH3 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Gm21788J3QNH3 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Gm21788J3QNH3 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Gm21788J3QNH3 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Gm21788J3QNH3 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Gm21788J3QNH3 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC15.19■□□□□ 0.02
Gm21788J3QNH3 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Gm21788J3QNH3 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Gm21788J3QNH3 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Gm21788J3QNH3 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Gm21788J3QNH3 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Gm21788J3QNH3 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
Gm21788J3QNH3 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
Gm21788J3QNH3 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
Gm21788J3QNH3 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Gm21788J3QNH3 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Gm21788J3QNH3 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Gm21788J3QNH3 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
Gm21788J3QNH3 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
Gm21788J3QNH3 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Gm21788J3QNH3 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Gm21788J3QNH3 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Gm21788J3QNH3 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Gm21788J3QNH3 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Gm21788J3QNH3 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Gm21788J3QNH3 Gm45606-201ENSMUST00000209836 2795 ntBASIC15.19■□□□□ 0.02
Gm21788J3QNH3 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Gm21788J3QNH3 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
Gm21788J3QNH3 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC15.18■□□□□ 0.02
Gm21788J3QNH3 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 50.9 ms