Protein–RNA interactions for Protein: J3QNE4

Ccdc180, Coiled-coil domain-containing 180, mousemouse

Predictions only

Length 1,664 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc180J3QNE4 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC32.94■■■□□ 2.86
Ccdc180J3QNE4 Gm5784-201ENSMUST00000179344 2478 ntBASIC32.94■■■□□ 2.86
Ccdc180J3QNE4 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC32.94■■■□□ 2.86
Ccdc180J3QNE4 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC32.94■■■□□ 2.86
Ccdc180J3QNE4 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC32.94■■■□□ 2.86
Ccdc180J3QNE4 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC32.94■■■□□ 2.86
Ccdc180J3QNE4 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC32.93■■■□□ 2.86
Ccdc180J3QNE4 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC32.93■■■□□ 2.86
Ccdc180J3QNE4 Iqck-206ENSMUST00000208658 2891 ntBASIC32.93■■■□□ 2.86
Ccdc180J3QNE4 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC32.93■■■□□ 2.86
Ccdc180J3QNE4 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC32.93■■■□□ 2.86
Ccdc180J3QNE4 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC32.93■■■□□ 2.86
Ccdc180J3QNE4 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC32.93■■■□□ 2.86
Ccdc180J3QNE4 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC32.93■■■□□ 2.86
Ccdc180J3QNE4 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC32.93■■■□□ 2.86
Ccdc180J3QNE4 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC32.93■■■□□ 2.86
Ccdc180J3QNE4 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC32.92■■■□□ 2.86
Ccdc180J3QNE4 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC32.92■■■□□ 2.86
Ccdc180J3QNE4 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC32.92■■■□□ 2.86
Ccdc180J3QNE4 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC32.92■■■□□ 2.86
Ccdc180J3QNE4 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC32.92■■■□□ 2.86
Ccdc180J3QNE4 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC32.92■■■□□ 2.86
Ccdc180J3QNE4 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC32.91■■■□□ 2.86
Ccdc180J3QNE4 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC32.91■■■□□ 2.86
Ccdc180J3QNE4 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC32.91■■■□□ 2.86
Ccdc180J3QNE4 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC32.91■■■□□ 2.86
Ccdc180J3QNE4 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC32.91■■■□□ 2.86
Ccdc180J3QNE4 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC32.91■■■□□ 2.86
Ccdc180J3QNE4 AC121961.1-201ENSMUST00000218594 1779 ntBASIC32.91■■■□□ 2.86
Ccdc180J3QNE4 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC32.91■■■□□ 2.86
Ccdc180J3QNE4 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC32.91■■■□□ 2.86
Ccdc180J3QNE4 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC32.91■■■□□ 2.86
Ccdc180J3QNE4 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC32.91■■■□□ 2.86
Ccdc180J3QNE4 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC32.91■■■□□ 2.86
Ccdc180J3QNE4 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC32.91■■■□□ 2.86
Ccdc180J3QNE4 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC32.9■■■□□ 2.86
Ccdc180J3QNE4 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC32.9■■■□□ 2.86
Ccdc180J3QNE4 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC32.9■■■□□ 2.86
Ccdc180J3QNE4 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC32.9■■■□□ 2.86
Ccdc180J3QNE4 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC32.9■■■□□ 2.86
Ccdc180J3QNE4 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC32.9■■■□□ 2.86
Ccdc180J3QNE4 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC32.9■■■□□ 2.86
Ccdc180J3QNE4 Gm27741-201ENSMUST00000185060 237 ntBASIC32.9■■■□□ 2.86
Ccdc180J3QNE4 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC32.9■■■□□ 2.86
Ccdc180J3QNE4 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC32.89■■■□□ 2.86
Ccdc180J3QNE4 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC32.89■■■□□ 2.86
Ccdc180J3QNE4 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC32.89■■■□□ 2.86
Ccdc180J3QNE4 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC32.89■■■□□ 2.86
Ccdc180J3QNE4 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC32.89■■■□□ 2.86
Ccdc180J3QNE4 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC32.89■■■□□ 2.86
Ccdc180J3QNE4 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC32.89■■■□□ 2.86
Ccdc180J3QNE4 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC32.89■■■□□ 2.86
Ccdc180J3QNE4 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC32.89■■■□□ 2.86
Ccdc180J3QNE4 Gm38308-201ENSMUST00000194934 1809 ntBASIC32.89■■■□□ 2.86
Ccdc180J3QNE4 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC32.88■■■□□ 2.85
Ccdc180J3QNE4 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC32.88■■■□□ 2.85
Ccdc180J3QNE4 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC32.88■■■□□ 2.85
Ccdc180J3QNE4 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC32.88■■■□□ 2.85
Ccdc180J3QNE4 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC32.88■■■□□ 2.85
Ccdc180J3QNE4 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC32.88■■■□□ 2.85
Ccdc180J3QNE4 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC32.88■■■□□ 2.85
Ccdc180J3QNE4 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC32.88■■■□□ 2.85
Ccdc180J3QNE4 BC021767-201ENSMUST00000126387 1716 ntBASIC32.87■■■□□ 2.85
Ccdc180J3QNE4 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC32.87■■■□□ 2.85
Ccdc180J3QNE4 Gm43213-201ENSMUST00000151866 1790 ntBASIC32.87■■■□□ 2.85
Ccdc180J3QNE4 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC32.87■■■□□ 2.85
Ccdc180J3QNE4 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC32.87■■■□□ 2.85
Ccdc180J3QNE4 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC32.87■■■□□ 2.85
Ccdc180J3QNE4 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC32.87■■■□□ 2.85
Ccdc180J3QNE4 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC32.87■■■□□ 2.85
Ccdc180J3QNE4 Gm43231-201ENSMUST00000202960 2258 ntBASIC32.87■■■□□ 2.85
Ccdc180J3QNE4 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC32.86■■■□□ 2.85
Ccdc180J3QNE4 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC32.86■■■□□ 2.85
Ccdc180J3QNE4 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC32.86■■■□□ 2.85
Ccdc180J3QNE4 Gm2274-201ENSMUST00000184539 609 ntBASIC32.85■■■□□ 2.85
Ccdc180J3QNE4 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC32.85■■■□□ 2.85
Ccdc180J3QNE4 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC32.85■■■□□ 2.85
Ccdc180J3QNE4 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC32.85■■■□□ 2.85
Ccdc180J3QNE4 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC32.85■■■□□ 2.85
Ccdc180J3QNE4 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC32.85■■■□□ 2.85
Ccdc180J3QNE4 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC32.84■■■□□ 2.85
Ccdc180J3QNE4 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC32.84■■■□□ 2.85
Ccdc180J3QNE4 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC32.84■■■□□ 2.85
Ccdc180J3QNE4 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC32.84■■■□□ 2.85
Ccdc180J3QNE4 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC32.84■■■□□ 2.85
Ccdc180J3QNE4 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC32.84■■■□□ 2.85
Ccdc180J3QNE4 Tgds-204ENSMUST00000228543 1594 ntBASIC32.84■■■□□ 2.85
Ccdc180J3QNE4 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC32.84■■■□□ 2.85
Ccdc180J3QNE4 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC32.83■■■□□ 2.85
Ccdc180J3QNE4 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC32.83■■■□□ 2.85
Ccdc180J3QNE4 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC32.83■■■□□ 2.85
Ccdc180J3QNE4 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC32.83■■■□□ 2.85
Ccdc180J3QNE4 Mir5130-201ENSMUST00000175160 84 ntBASIC32.83■■■□□ 2.85
Ccdc180J3QNE4 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC32.83■■■□□ 2.85
Ccdc180J3QNE4 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC32.83■■■□□ 2.85
Ccdc180J3QNE4 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC32.83■■■□□ 2.85
Ccdc180J3QNE4 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC32.83■■■□□ 2.85
Ccdc180J3QNE4 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC32.83■■■□□ 2.85
Ccdc180J3QNE4 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC32.83■■■□□ 2.85
Ccdc180J3QNE4 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC32.83■■■□□ 2.85
Retrieved 100 of 76,532 protein–RNA pairs in 208 ms