Protein–RNA interactions for Protein: J3QMS8

Gm3415, Predicted gene 3415, mousemouse

Predictions only

Length 315 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3415J3QMS8 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
Gm3415J3QMS8 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Gm3415J3QMS8 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
Gm3415J3QMS8 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Gm3415J3QMS8 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
Gm3415J3QMS8 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Gm3415J3QMS8 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Gm3415J3QMS8 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC19.19■□□□□ 0.66
Gm3415J3QMS8 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Gm3415J3QMS8 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Gm3415J3QMS8 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC19.19■□□□□ 0.66
Gm3415J3QMS8 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC19.19■□□□□ 0.66
Gm3415J3QMS8 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Gm3415J3QMS8 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Gm3415J3QMS8 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Gm3415J3QMS8 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Gm3415J3QMS8 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC19.18■□□□□ 0.66
Gm3415J3QMS8 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC19.18■□□□□ 0.66
Gm3415J3QMS8 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
Gm3415J3QMS8 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Gm3415J3QMS8 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Gm3415J3QMS8 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
Gm3415J3QMS8 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
Gm3415J3QMS8 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Gm3415J3QMS8 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Gm3415J3QMS8 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC19.18■□□□□ 0.66
Gm3415J3QMS8 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Gm3415J3QMS8 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Gm3415J3QMS8 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Gm3415J3QMS8 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Gm3415J3QMS8 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC19.17■□□□□ 0.66
Gm3415J3QMS8 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Gm3415J3QMS8 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Gm3415J3QMS8 Gm38308-201ENSMUST00000194934 1809 ntBASIC19.17■□□□□ 0.66
Gm3415J3QMS8 Gm2399-201ENSMUST00000104944 225 ntBASIC19.17■□□□□ 0.66
Gm3415J3QMS8 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
Gm3415J3QMS8 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC19.17■□□□□ 0.66
Gm3415J3QMS8 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Gm3415J3QMS8 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
Gm3415J3QMS8 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
Gm3415J3QMS8 Dmtn-210ENSMUST00000228824 2377 ntBASIC19.17■□□□□ 0.66
Gm3415J3QMS8 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Gm3415J3QMS8 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Gm3415J3QMS8 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC19.16■□□□□ 0.66
Gm3415J3QMS8 Gm2559-201ENSMUST00000201323 363 ntBASIC19.16■□□□□ 0.66
Gm3415J3QMS8 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Gm3415J3QMS8 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
Gm3415J3QMS8 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Gm3415J3QMS8 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Gm3415J3QMS8 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC19.16■□□□□ 0.66
Gm3415J3QMS8 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Gm3415J3QMS8 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Gm3415J3QMS8 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Gm3415J3QMS8 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Gm3415J3QMS8 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
Gm3415J3QMS8 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Gm3415J3QMS8 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Gm3415J3QMS8 Gm12896-201ENSMUST00000118430 226 ntBASIC19.15■□□□□ 0.66
Gm3415J3QMS8 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC19.15■□□□□ 0.66
Gm3415J3QMS8 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Gm3415J3QMS8 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC19.15■□□□□ 0.66
Gm3415J3QMS8 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
Gm3415J3QMS8 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Gm3415J3QMS8 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Gm3415J3QMS8 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Gm3415J3QMS8 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC19.15■□□□□ 0.66
Gm3415J3QMS8 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Gm3415J3QMS8 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Gm3415J3QMS8 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Gm3415J3QMS8 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Gm3415J3QMS8 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Gm3415J3QMS8 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC19.14■□□□□ 0.65
Gm3415J3QMS8 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
Gm3415J3QMS8 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Gm3415J3QMS8 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Gm3415J3QMS8 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Gm3415J3QMS8 Gm12669-201ENSMUST00000122162 1009 ntBASIC19.13■□□□□ 0.65
Gm3415J3QMS8 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
Gm3415J3QMS8 Gm20049-201ENSMUST00000219950 730 ntBASIC19.13■□□□□ 0.65
Gm3415J3QMS8 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC19.13■□□□□ 0.65
Gm3415J3QMS8 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Gm3415J3QMS8 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Gm3415J3QMS8 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Gm3415J3QMS8 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Gm3415J3QMS8 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Gm3415J3QMS8 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Gm3415J3QMS8 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
Gm3415J3QMS8 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Gm3415J3QMS8 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Gm3415J3QMS8 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
Gm3415J3QMS8 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Gm3415J3QMS8 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC19.12■□□□□ 0.65
Gm3415J3QMS8 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Gm3415J3QMS8 Gm43213-201ENSMUST00000151866 1790 ntBASIC19.12■□□□□ 0.65
Gm3415J3QMS8 AC121961.1-201ENSMUST00000218594 1779 ntBASIC19.12■□□□□ 0.65
Gm3415J3QMS8 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Gm3415J3QMS8 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Gm3415J3QMS8 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Gm3415J3QMS8 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
Gm3415J3QMS8 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC19.12■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 24.9 ms