Protein–RNA interactions for Protein: F8VQB8

Npcd, Neuronal pentraxin chromo domain, mousemouse

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NpcdF8VQB8 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
NpcdF8VQB8 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
NpcdF8VQB8 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC21.64■■□□□ 1.05
NpcdF8VQB8 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC21.64■■□□□ 1.05
NpcdF8VQB8 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC21.64■■□□□ 1.05
NpcdF8VQB8 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
NpcdF8VQB8 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
NpcdF8VQB8 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC21.63■■□□□ 1.05
NpcdF8VQB8 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC21.63■■□□□ 1.05
NpcdF8VQB8 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
NpcdF8VQB8 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
NpcdF8VQB8 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC21.63■■□□□ 1.05
NpcdF8VQB8 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
NpcdF8VQB8 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC21.63■■□□□ 1.05
NpcdF8VQB8 Gm5540-201ENSMUST00000131852 1848 ntBASIC21.63■■□□□ 1.05
NpcdF8VQB8 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
NpcdF8VQB8 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC21.63■■□□□ 1.05
NpcdF8VQB8 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
NpcdF8VQB8 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC21.63■■□□□ 1.05
NpcdF8VQB8 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC21.62■■□□□ 1.05
NpcdF8VQB8 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC21.62■■□□□ 1.05
NpcdF8VQB8 9130024F11Rik-201ENSMUST00000135238 1300 ntTSL 2 BASIC21.62■■□□□ 1.05
NpcdF8VQB8 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
NpcdF8VQB8 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
NpcdF8VQB8 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC21.62■■□□□ 1.05
NpcdF8VQB8 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
NpcdF8VQB8 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC21.62■■□□□ 1.05
NpcdF8VQB8 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC21.62■■□□□ 1.05
NpcdF8VQB8 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
NpcdF8VQB8 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC21.62■■□□□ 1.05
NpcdF8VQB8 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC21.62■■□□□ 1.05
NpcdF8VQB8 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC21.62■■□□□ 1.05
NpcdF8VQB8 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
NpcdF8VQB8 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC21.61■■□□□ 1.05
NpcdF8VQB8 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC21.61■■□□□ 1.05
NpcdF8VQB8 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
NpcdF8VQB8 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
NpcdF8VQB8 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
NpcdF8VQB8 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC21.61■■□□□ 1.05
NpcdF8VQB8 Gm17807-201ENSMUST00000186869 298 ntBASIC21.61■■□□□ 1.05
NpcdF8VQB8 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
NpcdF8VQB8 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC21.61■■□□□ 1.05
NpcdF8VQB8 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC21.6■■□□□ 1.05
NpcdF8VQB8 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC21.6■■□□□ 1.05
NpcdF8VQB8 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC21.6■■□□□ 1.05
NpcdF8VQB8 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
NpcdF8VQB8 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC21.6■■□□□ 1.05
NpcdF8VQB8 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC21.6■■□□□ 1.05
NpcdF8VQB8 Umpk-ps-201ENSMUST00000211897 827 ntBASIC21.6■■□□□ 1.05
NpcdF8VQB8 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
NpcdF8VQB8 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
NpcdF8VQB8 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
NpcdF8VQB8 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC21.6■■□□□ 1.05
NpcdF8VQB8 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC21.59■■□□□ 1.05
NpcdF8VQB8 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC21.59■■□□□ 1.05
NpcdF8VQB8 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC21.59■■□□□ 1.05
NpcdF8VQB8 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
NpcdF8VQB8 Gm38027-201ENSMUST00000192315 235 ntBASIC21.59■■□□□ 1.05
NpcdF8VQB8 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC21.59■■□□□ 1.05
NpcdF8VQB8 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
NpcdF8VQB8 Idnk-201ENSMUST00000051490 764 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
NpcdF8VQB8 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
NpcdF8VQB8 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
NpcdF8VQB8 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
NpcdF8VQB8 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
NpcdF8VQB8 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
NpcdF8VQB8 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
NpcdF8VQB8 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
NpcdF8VQB8 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
NpcdF8VQB8 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC21.59■■□□□ 1.05
NpcdF8VQB8 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC21.58■■□□□ 1.05
NpcdF8VQB8 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
NpcdF8VQB8 Gm18669-201ENSMUST00000216049 778 ntBASIC21.58■■□□□ 1.05
NpcdF8VQB8 Gm5867-201ENSMUST00000063197 592 ntBASIC21.58■■□□□ 1.05
NpcdF8VQB8 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
NpcdF8VQB8 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
NpcdF8VQB8 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC21.58■■□□□ 1.04
NpcdF8VQB8 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
NpcdF8VQB8 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
NpcdF8VQB8 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
NpcdF8VQB8 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
NpcdF8VQB8 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
NpcdF8VQB8 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
NpcdF8VQB8 Gm12085-201ENSMUST00000119263 940 ntBASIC21.57■■□□□ 1.04
NpcdF8VQB8 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
NpcdF8VQB8 Gm5587-201ENSMUST00000206270 674 ntBASIC21.57■■□□□ 1.04
NpcdF8VQB8 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC21.57■■□□□ 1.04
NpcdF8VQB8 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC21.57■■□□□ 1.04
NpcdF8VQB8 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
NpcdF8VQB8 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
NpcdF8VQB8 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
NpcdF8VQB8 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC21.57■■□□□ 1.04
NpcdF8VQB8 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
NpcdF8VQB8 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC21.56■■□□□ 1.04
NpcdF8VQB8 Gm16061-201ENSMUST00000122167 857 ntBASIC21.56■■□□□ 1.04
NpcdF8VQB8 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
NpcdF8VQB8 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
NpcdF8VQB8 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
NpcdF8VQB8 Hsf1-204ENSMUST00000226872 2104 ntBASIC21.56■■□□□ 1.04
NpcdF8VQB8 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Retrieved 100 of 76,532 protein–RNA pairs in 23.9 ms