Protein–RNA interactions for Protein: F6WEU2

Ccdc188, Coiled-coil domain-containing 188, mousemouse

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc188F6WEU2 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC18.29■□□□□ 0.52
Ccdc188F6WEU2 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Ccdc188F6WEU2 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Ccdc188F6WEU2 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
Ccdc188F6WEU2 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
Ccdc188F6WEU2 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Ccdc188F6WEU2 Gm10052-201ENSMUST00000168019 960 ntBASIC18.28■□□□□ 0.52
Ccdc188F6WEU2 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC18.28■□□□□ 0.52
Ccdc188F6WEU2 Gm26517-201ENSMUST00000181279 1172 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Ccdc188F6WEU2 Ccnd3-208ENSMUST00000182539 931 ntTSL 2 BASIC18.28■□□□□ 0.52
Ccdc188F6WEU2 Gm27702-201ENSMUST00000184512 56 ntBASIC18.28■□□□□ 0.52
Ccdc188F6WEU2 Gm8000-201ENSMUST00000188378 592 ntBASIC18.28■□□□□ 0.52
Ccdc188F6WEU2 AC124569.2-201ENSMUST00000225998 818 ntBASIC18.28■□□□□ 0.52
Ccdc188F6WEU2 Arl3-201ENSMUST00000026009 822 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Ccdc188F6WEU2 Gm7729-201ENSMUST00000050143 801 ntBASIC18.28■□□□□ 0.52
Ccdc188F6WEU2 1600017P15Rik-201ENSMUST00000083427 412 ntBASIC18.28■□□□□ 0.52
Ccdc188F6WEU2 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Ccdc188F6WEU2 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Ccdc188F6WEU2 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Ccdc188F6WEU2 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Ccdc188F6WEU2 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Ccdc188F6WEU2 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Ccdc188F6WEU2 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
Ccdc188F6WEU2 Gm37352-201ENSMUST00000193908 2181 ntBASIC18.27■□□□□ 0.52
Ccdc188F6WEU2 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Ccdc188F6WEU2 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Ccdc188F6WEU2 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC18.27■□□□□ 0.52
Ccdc188F6WEU2 Gm10576-201ENSMUST00000191927 825 ntBASIC18.27■□□□□ 0.52
Ccdc188F6WEU2 Gm43575-201ENSMUST00000196420 516 ntBASIC18.27■□□□□ 0.52
Ccdc188F6WEU2 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Ccdc188F6WEU2 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Ccdc188F6WEU2 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC18.27■□□□□ 0.52
Ccdc188F6WEU2 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Ccdc188F6WEU2 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Ccdc188F6WEU2 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Ccdc188F6WEU2 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Ccdc188F6WEU2 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC18.26■□□□□ 0.51
Ccdc188F6WEU2 Gm12895-201ENSMUST00000122214 226 ntBASIC18.26■□□□□ 0.51
Ccdc188F6WEU2 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC18.26■□□□□ 0.51
Ccdc188F6WEU2 Gm26039-201ENSMUST00000158152 144 ntBASIC18.26■□□□□ 0.51
Ccdc188F6WEU2 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Ccdc188F6WEU2 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC18.26■□□□□ 0.51
Ccdc188F6WEU2 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Ccdc188F6WEU2 Cda-201ENSMUST00000030535 846 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Ccdc188F6WEU2 Gm9925-201ENSMUST00000066583 483 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
Ccdc188F6WEU2 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
Ccdc188F6WEU2 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Ccdc188F6WEU2 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Ccdc188F6WEU2 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Ccdc188F6WEU2 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC18.25■□□□□ 0.51
Ccdc188F6WEU2 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Ccdc188F6WEU2 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Ccdc188F6WEU2 Gm1401-201ENSMUST00000122048 772 ntBASIC18.25■□□□□ 0.51
Ccdc188F6WEU2 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC18.25■□□□□ 0.51
Ccdc188F6WEU2 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Ccdc188F6WEU2 Gm9449-201ENSMUST00000207265 1011 ntBASIC18.25■□□□□ 0.51
Ccdc188F6WEU2 Gm45328-201ENSMUST00000210942 917 ntBASIC18.25■□□□□ 0.51
Ccdc188F6WEU2 Lsmem1-201ENSMUST00000095760 1213 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Ccdc188F6WEU2 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Ccdc188F6WEU2 Gm32051-202ENSMUST00000197905 2385 ntBASIC18.25■□□□□ 0.51
Ccdc188F6WEU2 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Ccdc188F6WEU2 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Ccdc188F6WEU2 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
Ccdc188F6WEU2 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
Ccdc188F6WEU2 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
Ccdc188F6WEU2 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC18.24■□□□□ 0.51
Ccdc188F6WEU2 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC18.24■□□□□ 0.51
Ccdc188F6WEU2 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
Ccdc188F6WEU2 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC18.24■□□□□ 0.51
Ccdc188F6WEU2 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC18.24■□□□□ 0.51
Ccdc188F6WEU2 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Ccdc188F6WEU2 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC18.24■□□□□ 0.51
Ccdc188F6WEU2 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
Ccdc188F6WEU2 Gm5186-201ENSMUST00000218781 920 ntBASIC18.24■□□□□ 0.51
Ccdc188F6WEU2 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Ccdc188F6WEU2 Atp6v0b-201ENSMUST00000036380 1000 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Ccdc188F6WEU2 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Ccdc188F6WEU2 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Ccdc188F6WEU2 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Ccdc188F6WEU2 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Ccdc188F6WEU2 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Ccdc188F6WEU2 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC18.23■□□□□ 0.51
Ccdc188F6WEU2 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC18.23■□□□□ 0.51
Ccdc188F6WEU2 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC18.23■□□□□ 0.51
Ccdc188F6WEU2 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
Ccdc188F6WEU2 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Ccdc188F6WEU2 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC18.23■□□□□ 0.51
Ccdc188F6WEU2 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC18.23■□□□□ 0.51
Ccdc188F6WEU2 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Ccdc188F6WEU2 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
Ccdc188F6WEU2 1110004F10Rik-203ENSMUST00000106608 927 ntTSL 3 BASIC18.23■□□□□ 0.51
Ccdc188F6WEU2 Gm28050-201ENSMUST00000124394 449 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Ccdc188F6WEU2 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
Ccdc188F6WEU2 Tamm41-201ENSMUST00000032461 1168 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Ccdc188F6WEU2 Dnph1-201ENSMUST00000046497 1106 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Ccdc188F6WEU2 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
Ccdc188F6WEU2 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Ccdc188F6WEU2 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC18.22■□□□□ 0.51
Ccdc188F6WEU2 AC131586.3-201ENSMUST00000228355 1367 ntBASIC18.22■□□□□ 0.51
Ccdc188F6WEU2 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 36.4 ms