Protein–RNA interactions for Protein: E9Q4T4

Ccdc71l, Coiled-coil domain-containing 71-like, mousemouse

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc71lE9Q4T4 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ccdc71lE9Q4T4 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Ccdc71lE9Q4T4 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Ccdc71lE9Q4T4 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ccdc71lE9Q4T4 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ccdc71lE9Q4T4 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Ccdc71lE9Q4T4 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC14.2□□□□□ -0.14
Ccdc71lE9Q4T4 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ccdc71lE9Q4T4 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ccdc71lE9Q4T4 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ccdc71lE9Q4T4 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC14.2□□□□□ -0.14
Ccdc71lE9Q4T4 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC14.19□□□□□ -0.14
Ccdc71lE9Q4T4 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ccdc71lE9Q4T4 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ccdc71lE9Q4T4 Ubn1-201ENSMUST00000052449 6455 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ccdc71lE9Q4T4 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ccdc71lE9Q4T4 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ccdc71lE9Q4T4 Dnajc1-209ENSMUST00000166495 5497 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ccdc71lE9Q4T4 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC14.19□□□□□ -0.14
Ccdc71lE9Q4T4 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Ccdc71lE9Q4T4 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC14.19□□□□□ -0.14
Ccdc71lE9Q4T4 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ccdc71lE9Q4T4 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Ccdc71lE9Q4T4 Mcm9-201ENSMUST00000075540 4882 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
Ccdc71lE9Q4T4 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ccdc71lE9Q4T4 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC14.18□□□□□ -0.14
Ccdc71lE9Q4T4 Gm45906-201ENSMUST00000208911 1430 ntBASIC14.18□□□□□ -0.14
Ccdc71lE9Q4T4 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ccdc71lE9Q4T4 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ccdc71lE9Q4T4 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ccdc71lE9Q4T4 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC14.18□□□□□ -0.14
Ccdc71lE9Q4T4 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Ccdc71lE9Q4T4 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC14.18□□□□□ -0.14
Ccdc71lE9Q4T4 AC140930.3-201ENSMUST00000222935 274 ntBASIC14.18□□□□□ -0.14
Ccdc71lE9Q4T4 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Ccdc71lE9Q4T4 Dlg5-203ENSMUST00000090398 7851 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ccdc71lE9Q4T4 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ccdc71lE9Q4T4 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ccdc71lE9Q4T4 Nyx-201ENSMUST00000050434 5183 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ccdc71lE9Q4T4 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ccdc71lE9Q4T4 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ccdc71lE9Q4T4 Pcdha3-201ENSMUST00000192503 5332 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ccdc71lE9Q4T4 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Ccdc71lE9Q4T4 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ccdc71lE9Q4T4 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ccdc71lE9Q4T4 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ccdc71lE9Q4T4 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ccdc71lE9Q4T4 Nfat5-211ENSMUST00000151114 4982 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ccdc71lE9Q4T4 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ccdc71lE9Q4T4 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ccdc71lE9Q4T4 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ccdc71lE9Q4T4 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ccdc71lE9Q4T4 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ccdc71lE9Q4T4 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC14.17□□□□□ -0.14
Ccdc71lE9Q4T4 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC14.17□□□□□ -0.14
Ccdc71lE9Q4T4 Smad6-203ENSMUST00000179458 273 ntBASIC14.17□□□□□ -0.14
Ccdc71lE9Q4T4 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Ccdc71lE9Q4T4 Gm13241-201ENSMUST00000094493 780 ntBASIC14.17□□□□□ -0.14
Ccdc71lE9Q4T4 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ccdc71lE9Q4T4 Alx4-201ENSMUST00000042078 5253 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ccdc71lE9Q4T4 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Ccdc71lE9Q4T4 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Ccdc71lE9Q4T4 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ccdc71lE9Q4T4 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ccdc71lE9Q4T4 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ccdc71lE9Q4T4 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ccdc71lE9Q4T4 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ccdc71lE9Q4T4 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ccdc71lE9Q4T4 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Ccdc71lE9Q4T4 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ccdc71lE9Q4T4 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ccdc71lE9Q4T4 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ccdc71lE9Q4T4 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ccdc71lE9Q4T4 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ccdc71lE9Q4T4 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ccdc71lE9Q4T4 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ccdc71lE9Q4T4 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC14.16□□□□□ -0.14
Ccdc71lE9Q4T4 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Ccdc71lE9Q4T4 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ccdc71lE9Q4T4 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ccdc71lE9Q4T4 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ccdc71lE9Q4T4 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ccdc71lE9Q4T4 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ccdc71lE9Q4T4 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC14.15□□□□□ -0.14
Ccdc71lE9Q4T4 Kmt5b-208ENSMUST00000113977 6002 ntAPPRIS P3 TSL 5 BASIC14.15□□□□□ -0.14
Ccdc71lE9Q4T4 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC14.15□□□□□ -0.14
Ccdc71lE9Q4T4 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Ccdc71lE9Q4T4 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ccdc71lE9Q4T4 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Ccdc71lE9Q4T4 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ccdc71lE9Q4T4 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ccdc71lE9Q4T4 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Ccdc71lE9Q4T4 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ccdc71lE9Q4T4 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ccdc71lE9Q4T4 Bri3bp-201ENSMUST00000049040 6473 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ccdc71lE9Q4T4 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Ccdc71lE9Q4T4 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC14.15□□□□□ -0.14
Ccdc71lE9Q4T4 Mir7075-201ENSMUST00000184187 82 ntBASIC14.15□□□□□ -0.14
Ccdc71lE9Q4T4 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Ccdc71lE9Q4T4 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 41.1 ms