Protein–RNA interactions for Protein: E9PVL6

Trim30b, Tripartite motif-containing 30B, mousemouse

Predictions only

Length 203 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim30bE9PVL6 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Trim30bE9PVL6 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Trim30bE9PVL6 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Trim30bE9PVL6 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Trim30bE9PVL6 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Trim30bE9PVL6 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Trim30bE9PVL6 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Trim30bE9PVL6 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Trim30bE9PVL6 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Trim30bE9PVL6 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Trim30bE9PVL6 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Trim30bE9PVL6 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC19.19■□□□□ 0.66
Trim30bE9PVL6 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
Trim30bE9PVL6 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC19.19■□□□□ 0.66
Trim30bE9PVL6 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Trim30bE9PVL6 Gm7856-201ENSMUST00000117514 1493 ntBASIC19.19■□□□□ 0.66
Trim30bE9PVL6 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Trim30bE9PVL6 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Trim30bE9PVL6 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Trim30bE9PVL6 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Trim30bE9PVL6 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Trim30bE9PVL6 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Trim30bE9PVL6 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Trim30bE9PVL6 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Trim30bE9PVL6 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
Trim30bE9PVL6 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Trim30bE9PVL6 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC19.18■□□□□ 0.66
Trim30bE9PVL6 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
Trim30bE9PVL6 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Trim30bE9PVL6 AC121961.1-201ENSMUST00000218594 1779 ntBASIC19.18■□□□□ 0.66
Trim30bE9PVL6 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Trim30bE9PVL6 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Trim30bE9PVL6 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Trim30bE9PVL6 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Trim30bE9PVL6 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Trim30bE9PVL6 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Trim30bE9PVL6 Gm9885-202ENSMUST00000186234 2209 ntBASIC19.17■□□□□ 0.66
Trim30bE9PVL6 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Trim30bE9PVL6 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Trim30bE9PVL6 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Trim30bE9PVL6 Gm12085-201ENSMUST00000119263 940 ntBASIC19.17■□□□□ 0.66
Trim30bE9PVL6 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC19.17■□□□□ 0.66
Trim30bE9PVL6 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Trim30bE9PVL6 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Trim30bE9PVL6 Gm10517-202ENSMUST00000192970 758 ntBASIC19.17■□□□□ 0.66
Trim30bE9PVL6 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Trim30bE9PVL6 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Trim30bE9PVL6 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Trim30bE9PVL6 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Trim30bE9PVL6 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Trim30bE9PVL6 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Trim30bE9PVL6 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Trim30bE9PVL6 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Trim30bE9PVL6 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Trim30bE9PVL6 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Trim30bE9PVL6 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC19.16■□□□□ 0.66
Trim30bE9PVL6 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Trim30bE9PVL6 AC108858.1-201ENSMUST00000228461 1498 ntBASIC19.16■□□□□ 0.66
Trim30bE9PVL6 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Trim30bE9PVL6 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Trim30bE9PVL6 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Trim30bE9PVL6 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC19.15■□□□□ 0.66
Trim30bE9PVL6 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
Trim30bE9PVL6 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
Trim30bE9PVL6 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Trim30bE9PVL6 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Trim30bE9PVL6 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
Trim30bE9PVL6 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC19.15■□□□□ 0.66
Trim30bE9PVL6 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Trim30bE9PVL6 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC19.15■□□□□ 0.66
Trim30bE9PVL6 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC19.15■□□□□ 0.66
Trim30bE9PVL6 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC19.15■□□□□ 0.66
Trim30bE9PVL6 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC19.15■□□□□ 0.66
Trim30bE9PVL6 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
Trim30bE9PVL6 Gm38308-201ENSMUST00000194934 1809 ntBASIC19.15■□□□□ 0.66
Trim30bE9PVL6 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC19.15■□□□□ 0.66
Trim30bE9PVL6 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Trim30bE9PVL6 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC19.14■□□□□ 0.66
Trim30bE9PVL6 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Trim30bE9PVL6 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC19.14■□□□□ 0.66
Trim30bE9PVL6 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Trim30bE9PVL6 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
Trim30bE9PVL6 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC19.14■□□□□ 0.65
Trim30bE9PVL6 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Trim30bE9PVL6 AC159205.6-201ENSMUST00000224935 887 ntBASIC19.14■□□□□ 0.65
Trim30bE9PVL6 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
Trim30bE9PVL6 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
Trim30bE9PVL6 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Trim30bE9PVL6 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Trim30bE9PVL6 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Trim30bE9PVL6 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Trim30bE9PVL6 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Trim30bE9PVL6 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Trim30bE9PVL6 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Trim30bE9PVL6 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Trim30bE9PVL6 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Trim30bE9PVL6 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Trim30bE9PVL6 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC19.13■□□□□ 0.65
Trim30bE9PVL6 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Trim30bE9PVL6 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC19.13■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 55.1 ms