Protein–RNA interactions for Protein: E9PUP3

Slc4a9, Anion exchange protein, mousemouse

Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc4a9E9PUP3 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC20.95■□□□□ 0.94
Slc4a9E9PUP3 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Slc4a9E9PUP3 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Slc4a9E9PUP3 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Slc4a9E9PUP3 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC20.95■□□□□ 0.94
Slc4a9E9PUP3 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Slc4a9E9PUP3 Gm27742-201ENSMUST00000184667 60 ntBASIC20.95■□□□□ 0.94
Slc4a9E9PUP3 Cenpp-201ENSMUST00000021818 1144 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Slc4a9E9PUP3 Dars-202ENSMUST00000064309 645 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Slc4a9E9PUP3 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
Slc4a9E9PUP3 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Slc4a9E9PUP3 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Slc4a9E9PUP3 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Slc4a9E9PUP3 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
Slc4a9E9PUP3 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Slc4a9E9PUP3 Gm7638-201ENSMUST00000121348 967 ntBASIC20.94■□□□□ 0.94
Slc4a9E9PUP3 Cgrrf1-204ENSMUST00000140114 419 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Slc4a9E9PUP3 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Slc4a9E9PUP3 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC20.94■□□□□ 0.94
Slc4a9E9PUP3 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC20.94■□□□□ 0.94
Slc4a9E9PUP3 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Slc4a9E9PUP3 Ogfod2-207ENSMUST00000196627 532 ntTSL 3 BASIC20.94■□□□□ 0.94
Slc4a9E9PUP3 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Slc4a9E9PUP3 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
Slc4a9E9PUP3 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
Slc4a9E9PUP3 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Slc4a9E9PUP3 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC20.93■□□□□ 0.94
Slc4a9E9PUP3 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC20.93■□□□□ 0.94
Slc4a9E9PUP3 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
Slc4a9E9PUP3 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC20.93■□□□□ 0.94
Slc4a9E9PUP3 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Slc4a9E9PUP3 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Slc4a9E9PUP3 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Slc4a9E9PUP3 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Slc4a9E9PUP3 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Slc4a9E9PUP3 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
Slc4a9E9PUP3 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Slc4a9E9PUP3 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC20.92■□□□□ 0.94
Slc4a9E9PUP3 Birc2-201ENSMUST00000054878 378 ntBASIC20.92■□□□□ 0.94
Slc4a9E9PUP3 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Slc4a9E9PUP3 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Slc4a9E9PUP3 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Slc4a9E9PUP3 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Slc4a9E9PUP3 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Slc4a9E9PUP3 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC20.91■□□□□ 0.94
Slc4a9E9PUP3 Gm7213-201ENSMUST00000215977 950 ntBASIC20.91■□□□□ 0.94
Slc4a9E9PUP3 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Slc4a9E9PUP3 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Slc4a9E9PUP3 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC20.91■□□□□ 0.94
Slc4a9E9PUP3 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
Slc4a9E9PUP3 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Slc4a9E9PUP3 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC20.91■□□□□ 0.94
Slc4a9E9PUP3 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC20.9■□□□□ 0.94
Slc4a9E9PUP3 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Slc4a9E9PUP3 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Slc4a9E9PUP3 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Slc4a9E9PUP3 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Slc4a9E9PUP3 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Slc4a9E9PUP3 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
Slc4a9E9PUP3 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Slc4a9E9PUP3 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Slc4a9E9PUP3 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Slc4a9E9PUP3 AC126028.2-201ENSMUST00000228100 1833 ntBASIC20.9■□□□□ 0.94
Slc4a9E9PUP3 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC20.89■□□□□ 0.93
Slc4a9E9PUP3 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.93
Slc4a9E9PUP3 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Slc4a9E9PUP3 Ndufaf8-202ENSMUST00000185558 427 ntTSL 5 BASIC20.89■□□□□ 0.93
Slc4a9E9PUP3 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC20.89■□□□□ 0.93
Slc4a9E9PUP3 Gm5864-201ENSMUST00000202263 970 ntBASIC20.89■□□□□ 0.93
Slc4a9E9PUP3 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC20.89■□□□□ 0.93
Slc4a9E9PUP3 Lce3c-201ENSMUST00000055375 567 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Slc4a9E9PUP3 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC20.88■□□□□ 0.93
Slc4a9E9PUP3 Cyhr1-204ENSMUST00000177359 1110 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Slc4a9E9PUP3 Dusp13-208ENSMUST00000183698 1019 ntTSL 5 BASIC20.88■□□□□ 0.93
Slc4a9E9PUP3 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC20.88■□□□□ 0.93
Slc4a9E9PUP3 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Slc4a9E9PUP3 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
Slc4a9E9PUP3 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
Slc4a9E9PUP3 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Slc4a9E9PUP3 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Slc4a9E9PUP3 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC20.87■□□□□ 0.93
Slc4a9E9PUP3 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Slc4a9E9PUP3 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC20.87■□□□□ 0.93
Slc4a9E9PUP3 Rnf141-201ENSMUST00000106682 1101 ntAPPRIS P1 TSL 3 BASIC20.87■□□□□ 0.93
Slc4a9E9PUP3 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC20.87■□□□□ 0.93
Slc4a9E9PUP3 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC20.87■□□□□ 0.93
Slc4a9E9PUP3 Gm37805-201ENSMUST00000192612 1094 ntBASIC20.87■□□□□ 0.93
Slc4a9E9PUP3 4930519L02Rik-201ENSMUST00000197683 619 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Slc4a9E9PUP3 Gm2270-201ENSMUST00000222858 797 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Slc4a9E9PUP3 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Slc4a9E9PUP3 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Slc4a9E9PUP3 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Slc4a9E9PUP3 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Slc4a9E9PUP3 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC20.86■□□□□ 0.93
Slc4a9E9PUP3 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Slc4a9E9PUP3 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC20.86■□□□□ 0.93
Slc4a9E9PUP3 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC20.86■□□□□ 0.93
Slc4a9E9PUP3 Ino80dos-204ENSMUST00000188602 678 ntTSL 2 BASIC20.86■□□□□ 0.93
Slc4a9E9PUP3 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Slc4a9E9PUP3 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Retrieved 100 of 76,532 protein–RNA pairs in 54.1 ms