Protein–RNA interactions for Protein: D3YZU1

Shank1, SH3 and multiple ankyrin repeat domains protein 1, mousemouse

Predictions only

Length 2,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shank1D3YZU1 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Shank1D3YZU1 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Shank1D3YZU1 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Shank1D3YZU1 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Shank1D3YZU1 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Shank1D3YZU1 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
Shank1D3YZU1 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC16.09■□□□□ 0.17
Shank1D3YZU1 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Shank1D3YZU1 Gm43353-201ENSMUST00000199224 1295 ntBASIC16.09■□□□□ 0.17
Shank1D3YZU1 Gm18101-201ENSMUST00000215769 548 ntBASIC16.09■□□□□ 0.17
Shank1D3YZU1 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Shank1D3YZU1 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.17
Shank1D3YZU1 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Shank1D3YZU1 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Shank1D3YZU1 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Shank1D3YZU1 Gm44544-201ENSMUST00000207052 1844 ntBASIC16.08■□□□□ 0.16
Shank1D3YZU1 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Shank1D3YZU1 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC16.08■□□□□ 0.16
Shank1D3YZU1 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
Shank1D3YZU1 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Shank1D3YZU1 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Shank1D3YZU1 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Shank1D3YZU1 AC126028.2-201ENSMUST00000228100 1833 ntBASIC16.07■□□□□ 0.16
Shank1D3YZU1 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
Shank1D3YZU1 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Shank1D3YZU1 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
Shank1D3YZU1 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Shank1D3YZU1 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Shank1D3YZU1 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Shank1D3YZU1 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Shank1D3YZU1 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Shank1D3YZU1 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Shank1D3YZU1 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Shank1D3YZU1 AC166341.7-201ENSMUST00000221698 126 ntBASIC16.07■□□□□ 0.16
Shank1D3YZU1 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Shank1D3YZU1 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Shank1D3YZU1 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
Shank1D3YZU1 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC16.07■□□□□ 0.16
Shank1D3YZU1 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
Shank1D3YZU1 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Shank1D3YZU1 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Shank1D3YZU1 Mras-203ENSMUST00000122384 1122 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Shank1D3YZU1 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Shank1D3YZU1 Gm38027-201ENSMUST00000192315 235 ntBASIC16.06■□□□□ 0.16
Shank1D3YZU1 Gzmm-201ENSMUST00000020549 1287 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Shank1D3YZU1 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC16.06■□□□□ 0.16
Shank1D3YZU1 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Shank1D3YZU1 Tfpt-202ENSMUST00000108641 1166 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Shank1D3YZU1 Gm14859-201ENSMUST00000117752 357 ntBASIC16.06■□□□□ 0.16
Shank1D3YZU1 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Shank1D3YZU1 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Shank1D3YZU1 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC16.06■□□□□ 0.16
Shank1D3YZU1 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC16.06■□□□□ 0.16
Shank1D3YZU1 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Shank1D3YZU1 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Shank1D3YZU1 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Shank1D3YZU1 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Shank1D3YZU1 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
Shank1D3YZU1 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Shank1D3YZU1 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC16.05■□□□□ 0.16
Shank1D3YZU1 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Shank1D3YZU1 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
Shank1D3YZU1 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Shank1D3YZU1 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
Shank1D3YZU1 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC16.04■□□□□ 0.16
Shank1D3YZU1 Gm27463-201ENSMUST00000183569 57 ntBASIC16.04■□□□□ 0.16
Shank1D3YZU1 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Shank1D3YZU1 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Shank1D3YZU1 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Shank1D3YZU1 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
Shank1D3YZU1 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Shank1D3YZU1 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC16.04■□□□□ 0.16
Shank1D3YZU1 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Shank1D3YZU1 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Shank1D3YZU1 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Shank1D3YZU1 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Shank1D3YZU1 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Shank1D3YZU1 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC16.04■□□□□ 0.16
Shank1D3YZU1 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Shank1D3YZU1 Gm34220-201ENSMUST00000223001 2709 ntBASIC16.04■□□□□ 0.16
Shank1D3YZU1 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
Shank1D3YZU1 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Shank1D3YZU1 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Shank1D3YZU1 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
Shank1D3YZU1 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Shank1D3YZU1 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Shank1D3YZU1 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Shank1D3YZU1 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Shank1D3YZU1 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC16.03■□□□□ 0.16
Shank1D3YZU1 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
Shank1D3YZU1 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Shank1D3YZU1 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Shank1D3YZU1 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC16.03■□□□□ 0.16
Shank1D3YZU1 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC16.03■□□□□ 0.16
Shank1D3YZU1 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Shank1D3YZU1 Gm43006-201ENSMUST00000197702 1602 ntBASIC16.03■□□□□ 0.16
Shank1D3YZU1 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Shank1D3YZU1 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Shank1D3YZU1 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Shank1D3YZU1 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 24.1 ms