Protein–RNA interactions for Protein: D3YV89

Mmp27, Matrix metalloproteinase, mousemouse

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp27D3YV89 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
Mmp27D3YV89 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC15.23■□□□□ 0.03
Mmp27D3YV89 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC15.23■□□□□ 0.03
Mmp27D3YV89 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Mmp27D3YV89 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Mmp27D3YV89 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Mmp27D3YV89 Gm43294-201ENSMUST00000202850 2490 ntBASIC15.23■□□□□ 0.03
Mmp27D3YV89 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC15.23■□□□□ 0.03
Mmp27D3YV89 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Mmp27D3YV89 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
Mmp27D3YV89 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Mmp27D3YV89 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Mmp27D3YV89 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
Mmp27D3YV89 Gm15853-202ENSMUST00000195518 2041 ntBASIC15.22■□□□□ 0.03
Mmp27D3YV89 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Mmp27D3YV89 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC15.22■□□□□ 0.03
Mmp27D3YV89 Gm42911-201ENSMUST00000199360 1630 ntBASIC15.22■□□□□ 0.03
Mmp27D3YV89 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Mmp27D3YV89 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Mmp27D3YV89 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Mmp27D3YV89 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Mmp27D3YV89 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC15.22■□□□□ 0.03
Mmp27D3YV89 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC15.22■□□□□ 0.03
Mmp27D3YV89 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Mmp27D3YV89 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Mmp27D3YV89 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Mmp27D3YV89 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Mmp27D3YV89 Tfap2c-201ENSMUST00000030391 2838 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Mmp27D3YV89 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Mmp27D3YV89 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
Mmp27D3YV89 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
Mmp27D3YV89 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC15.22■□□□□ 0.03
Mmp27D3YV89 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
Mmp27D3YV89 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Mmp27D3YV89 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Mmp27D3YV89 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Mmp27D3YV89 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Mmp27D3YV89 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Mmp27D3YV89 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Mmp27D3YV89 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
Mmp27D3YV89 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Mmp27D3YV89 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Mmp27D3YV89 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Mmp27D3YV89 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Mmp27D3YV89 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Mmp27D3YV89 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC15.21■□□□□ 0.02
Mmp27D3YV89 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.02
Mmp27D3YV89 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Mmp27D3YV89 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Mmp27D3YV89 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Mmp27D3YV89 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Mmp27D3YV89 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Mmp27D3YV89 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Mmp27D3YV89 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Mmp27D3YV89 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Mmp27D3YV89 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC15.2■□□□□ 0.02
Mmp27D3YV89 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Mmp27D3YV89 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC15.2■□□□□ 0.02
Mmp27D3YV89 AC099934.2-201ENSMUST00000196389 70 ntBASIC15.2■□□□□ 0.02
Mmp27D3YV89 AC156953.1-201ENSMUST00000196953 70 ntBASIC15.2■□□□□ 0.02
Mmp27D3YV89 Gm42778-201ENSMUST00000199644 553 ntBASIC15.2■□□□□ 0.02
Mmp27D3YV89 AC157822.2-201ENSMUST00000200291 70 ntBASIC15.2■□□□□ 0.02
Mmp27D3YV89 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC15.2■□□□□ 0.02
Mmp27D3YV89 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Mmp27D3YV89 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Mmp27D3YV89 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Mmp27D3YV89 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Mmp27D3YV89 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Mmp27D3YV89 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Mmp27D3YV89 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Mmp27D3YV89 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Mmp27D3YV89 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Mmp27D3YV89 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Mmp27D3YV89 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
Mmp27D3YV89 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Mmp27D3YV89 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Mmp27D3YV89 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Mmp27D3YV89 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Mmp27D3YV89 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Mmp27D3YV89 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Mmp27D3YV89 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Mmp27D3YV89 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Mmp27D3YV89 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Mmp27D3YV89 Kcnj14-201ENSMUST00000071937 2681 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Mmp27D3YV89 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Mmp27D3YV89 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Mmp27D3YV89 Gm27801-201ENSMUST00000184174 223 ntBASIC15.19■□□□□ 0.02
Mmp27D3YV89 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Mmp27D3YV89 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC15.19■□□□□ 0.02
Mmp27D3YV89 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Mmp27D3YV89 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Mmp27D3YV89 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Mmp27D3YV89 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC15.19■□□□□ 0.02
Mmp27D3YV89 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Mmp27D3YV89 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Mmp27D3YV89 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Mmp27D3YV89 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Mmp27D3YV89 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Mmp27D3YV89 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Mmp27D3YV89 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 27.6 ms