Protein–RNA interactions for Protein: B5KM66

Syce3, Synaptonemal complex central element protein 3, mousemouse

Predictions only

Length 88 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syce3B5KM66 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
Syce3B5KM66 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC20.63■□□□□ 0.89
Syce3B5KM66 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
Syce3B5KM66 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Syce3B5KM66 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Syce3B5KM66 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
Syce3B5KM66 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Syce3B5KM66 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Syce3B5KM66 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
Syce3B5KM66 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Syce3B5KM66 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Syce3B5KM66 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Syce3B5KM66 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Syce3B5KM66 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Syce3B5KM66 Gm37519-201ENSMUST00000191687 2210 ntBASIC20.62■□□□□ 0.89
Syce3B5KM66 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Syce3B5KM66 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Syce3B5KM66 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Syce3B5KM66 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
Syce3B5KM66 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Syce3B5KM66 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Syce3B5KM66 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Syce3B5KM66 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC20.62■□□□□ 0.89
Syce3B5KM66 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Syce3B5KM66 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
Syce3B5KM66 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Syce3B5KM66 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Syce3B5KM66 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Syce3B5KM66 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
Syce3B5KM66 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Syce3B5KM66 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Syce3B5KM66 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Syce3B5KM66 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
Syce3B5KM66 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Syce3B5KM66 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
Syce3B5KM66 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Syce3B5KM66 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC20.61■□□□□ 0.89
Syce3B5KM66 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Syce3B5KM66 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Syce3B5KM66 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC20.61■□□□□ 0.89
Syce3B5KM66 Gm38205-201ENSMUST00000192243 258 ntBASIC20.61■□□□□ 0.89
Syce3B5KM66 Rps24-207ENSMUST00000224568 714 ntBASIC20.61■□□□□ 0.89
Syce3B5KM66 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Syce3B5KM66 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Syce3B5KM66 Gm45412-201ENSMUST00000210217 2275 ntBASIC20.61■□□□□ 0.89
Syce3B5KM66 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC20.61■□□□□ 0.89
Syce3B5KM66 Gm8309-201ENSMUST00000206627 1448 ntBASIC20.61■□□□□ 0.89
Syce3B5KM66 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Syce3B5KM66 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Syce3B5KM66 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Syce3B5KM66 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
Syce3B5KM66 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC20.6■□□□□ 0.89
Syce3B5KM66 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Syce3B5KM66 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Syce3B5KM66 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
Syce3B5KM66 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Syce3B5KM66 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Syce3B5KM66 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Syce3B5KM66 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC20.6■□□□□ 0.89
Syce3B5KM66 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC20.6■□□□□ 0.89
Syce3B5KM66 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Syce3B5KM66 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
Syce3B5KM66 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC20.6■□□□□ 0.89
Syce3B5KM66 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Syce3B5KM66 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC20.6■□□□□ 0.89
Syce3B5KM66 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Syce3B5KM66 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Syce3B5KM66 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
Syce3B5KM66 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC20.6■□□□□ 0.89
Syce3B5KM66 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Syce3B5KM66 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Syce3B5KM66 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Syce3B5KM66 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Syce3B5KM66 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Syce3B5KM66 Gm43808-201ENSMUST00000202534 2065 ntBASIC20.59■□□□□ 0.89
Syce3B5KM66 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Syce3B5KM66 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Syce3B5KM66 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC20.59■□□□□ 0.89
Syce3B5KM66 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC20.59■□□□□ 0.89
Syce3B5KM66 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Syce3B5KM66 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Syce3B5KM66 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Syce3B5KM66 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Syce3B5KM66 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Syce3B5KM66 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Syce3B5KM66 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Syce3B5KM66 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
Syce3B5KM66 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC20.59■□□□□ 0.89
Syce3B5KM66 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC20.58■□□□□ 0.89
Syce3B5KM66 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Syce3B5KM66 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
Syce3B5KM66 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC20.58■□□□□ 0.89
Syce3B5KM66 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Syce3B5KM66 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Syce3B5KM66 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC20.58■□□□□ 0.89
Syce3B5KM66 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC20.58■□□□□ 0.89
Syce3B5KM66 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Syce3B5KM66 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Syce3B5KM66 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Syce3B5KM66 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 61.8 ms