Protein–RNA interactions for Protein: B2RVW2

Clrn2, Clarin 2, mousemouse

Predictions only

Length 232 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn2B2RVW2 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Clrn2B2RVW2 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Clrn2B2RVW2 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Clrn2B2RVW2 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Clrn2B2RVW2 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
Clrn2B2RVW2 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Clrn2B2RVW2 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Clrn2B2RVW2 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Clrn2B2RVW2 Gm23634-201ENSMUST00000175071 91 ntBASIC20.9■□□□□ 0.94
Clrn2B2RVW2 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
Clrn2B2RVW2 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Clrn2B2RVW2 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Clrn2B2RVW2 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
Clrn2B2RVW2 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC20.89■□□□□ 0.94
Clrn2B2RVW2 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Clrn2B2RVW2 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Clrn2B2RVW2 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Clrn2B2RVW2 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Clrn2B2RVW2 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC20.89■□□□□ 0.93
Clrn2B2RVW2 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC20.89■□□□□ 0.93
Clrn2B2RVW2 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Clrn2B2RVW2 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Clrn2B2RVW2 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC20.88■□□□□ 0.93
Clrn2B2RVW2 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Clrn2B2RVW2 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Clrn2B2RVW2 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Clrn2B2RVW2 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Clrn2B2RVW2 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Clrn2B2RVW2 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Clrn2B2RVW2 Gm27463-201ENSMUST00000183569 57 ntBASIC20.88■□□□□ 0.93
Clrn2B2RVW2 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC20.88■□□□□ 0.93
Clrn2B2RVW2 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Clrn2B2RVW2 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Clrn2B2RVW2 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
Clrn2B2RVW2 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Clrn2B2RVW2 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Clrn2B2RVW2 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Clrn2B2RVW2 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC20.87■□□□□ 0.93
Clrn2B2RVW2 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
Clrn2B2RVW2 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Clrn2B2RVW2 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Clrn2B2RVW2 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
Clrn2B2RVW2 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC20.87■□□□□ 0.93
Clrn2B2RVW2 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Clrn2B2RVW2 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Clrn2B2RVW2 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Clrn2B2RVW2 Gm43353-201ENSMUST00000199224 1295 ntBASIC20.87■□□□□ 0.93
Clrn2B2RVW2 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Clrn2B2RVW2 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Clrn2B2RVW2 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Clrn2B2RVW2 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
Clrn2B2RVW2 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
Clrn2B2RVW2 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Clrn2B2RVW2 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Clrn2B2RVW2 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Clrn2B2RVW2 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Clrn2B2RVW2 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Clrn2B2RVW2 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Clrn2B2RVW2 Gm6728-201ENSMUST00000178117 1065 ntBASIC20.86■□□□□ 0.93
Clrn2B2RVW2 Gm45058-201ENSMUST00000205810 766 ntBASIC20.86■□□□□ 0.93
Clrn2B2RVW2 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Clrn2B2RVW2 Gm18032-201ENSMUST00000222541 538 ntBASIC20.86■□□□□ 0.93
Clrn2B2RVW2 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Clrn2B2RVW2 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Clrn2B2RVW2 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Clrn2B2RVW2 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Clrn2B2RVW2 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC20.85■□□□□ 0.93
Clrn2B2RVW2 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
Clrn2B2RVW2 Gm43545-201ENSMUST00000196765 2779 ntBASIC20.85■□□□□ 0.93
Clrn2B2RVW2 Gm10013-201ENSMUST00000106074 672 ntBASIC20.85■□□□□ 0.93
Clrn2B2RVW2 Gm38027-201ENSMUST00000192315 235 ntBASIC20.85■□□□□ 0.93
Clrn2B2RVW2 Gm9694-201ENSMUST00000193347 1189 ntBASIC20.85■□□□□ 0.93
Clrn2B2RVW2 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Clrn2B2RVW2 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Clrn2B2RVW2 AC108858.1-201ENSMUST00000228461 1498 ntBASIC20.85■□□□□ 0.93
Clrn2B2RVW2 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
Clrn2B2RVW2 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Clrn2B2RVW2 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Clrn2B2RVW2 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
Clrn2B2RVW2 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Clrn2B2RVW2 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC20.84■□□□□ 0.93
Clrn2B2RVW2 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC20.84■□□□□ 0.93
Clrn2B2RVW2 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC20.84■□□□□ 0.93
Clrn2B2RVW2 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Clrn2B2RVW2 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Clrn2B2RVW2 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Clrn2B2RVW2 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Clrn2B2RVW2 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Clrn2B2RVW2 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Clrn2B2RVW2 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Clrn2B2RVW2 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
Clrn2B2RVW2 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC20.83■□□□□ 0.93
Clrn2B2RVW2 Mir5130-201ENSMUST00000175160 84 ntBASIC20.83■□□□□ 0.93
Clrn2B2RVW2 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Clrn2B2RVW2 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Clrn2B2RVW2 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
Clrn2B2RVW2 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Clrn2B2RVW2 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Clrn2B2RVW2 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Clrn2B2RVW2 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Retrieved 100 of 76,532 protein–RNA pairs in 19.2 ms