Protein–RNA interactions for Protein: B2RS91

Rrn3, RNA polymerase I-specific transcription initiation factor RRN3, mousemouse

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rrn3B2RS91 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Rrn3B2RS91 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Rrn3B2RS91 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Rrn3B2RS91 Gm42900-201ENSMUST00000197184 2167 ntBASIC18.11■□□□□ 0.49
Rrn3B2RS91 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Rrn3B2RS91 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Rrn3B2RS91 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Rrn3B2RS91 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC18.1■□□□□ 0.49
Rrn3B2RS91 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Rrn3B2RS91 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
Rrn3B2RS91 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Rrn3B2RS91 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Rrn3B2RS91 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
Rrn3B2RS91 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC18.1■□□□□ 0.49
Rrn3B2RS91 Flg-201ENSMUST00000050758 1488 ntBASIC18.1■□□□□ 0.49
Rrn3B2RS91 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC18.1■□□□□ 0.49
Rrn3B2RS91 Gm12527-201ENSMUST00000117967 564 ntBASIC18.1■□□□□ 0.49
Rrn3B2RS91 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC18.1■□□□□ 0.49
Rrn3B2RS91 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Rrn3B2RS91 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
Rrn3B2RS91 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Rrn3B2RS91 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Rrn3B2RS91 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Rrn3B2RS91 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Rrn3B2RS91 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Rrn3B2RS91 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
Rrn3B2RS91 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Rrn3B2RS91 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Rrn3B2RS91 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC18.09■□□□□ 0.49
Rrn3B2RS91 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Rrn3B2RS91 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Rrn3B2RS91 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Rrn3B2RS91 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
Rrn3B2RS91 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Rrn3B2RS91 Gm12896-201ENSMUST00000118430 226 ntBASIC18.09■□□□□ 0.49
Rrn3B2RS91 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Rrn3B2RS91 AC107452.1-201ENSMUST00000227963 481 ntBASIC18.09■□□□□ 0.49
Rrn3B2RS91 AC112142.1-201ENSMUST00000228796 918 ntBASIC18.09■□□□□ 0.49
Rrn3B2RS91 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC18.09■□□□□ 0.49
Rrn3B2RS91 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Rrn3B2RS91 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Rrn3B2RS91 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
Rrn3B2RS91 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Rrn3B2RS91 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Rrn3B2RS91 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Rrn3B2RS91 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
Rrn3B2RS91 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Rrn3B2RS91 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Rrn3B2RS91 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.49
Rrn3B2RS91 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Rrn3B2RS91 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Rrn3B2RS91 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC18.08■□□□□ 0.48
Rrn3B2RS91 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Rrn3B2RS91 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Rrn3B2RS91 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Rrn3B2RS91 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
Rrn3B2RS91 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC18.08■□□□□ 0.48
Rrn3B2RS91 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Rrn3B2RS91 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Rrn3B2RS91 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Rrn3B2RS91 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Rrn3B2RS91 Gm45606-201ENSMUST00000209836 2795 ntBASIC18.08■□□□□ 0.48
Rrn3B2RS91 Gm45906-201ENSMUST00000208911 1430 ntBASIC18.07■□□□□ 0.48
Rrn3B2RS91 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Rrn3B2RS91 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Rrn3B2RS91 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Rrn3B2RS91 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Rrn3B2RS91 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
Rrn3B2RS91 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Rrn3B2RS91 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC18.07■□□□□ 0.48
Rrn3B2RS91 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Rrn3B2RS91 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC18.07■□□□□ 0.48
Rrn3B2RS91 AC135637.1-201ENSMUST00000227750 365 ntBASIC18.07■□□□□ 0.48
Rrn3B2RS91 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Rrn3B2RS91 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC18.07■□□□□ 0.48
Rrn3B2RS91 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Rrn3B2RS91 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Rrn3B2RS91 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Rrn3B2RS91 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Rrn3B2RS91 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Rrn3B2RS91 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Rrn3B2RS91 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
Rrn3B2RS91 Dio3-201ENSMUST00000097228 1449 ntBASIC18.06■□□□□ 0.48
Rrn3B2RS91 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
Rrn3B2RS91 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Rrn3B2RS91 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC18.06■□□□□ 0.48
Rrn3B2RS91 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Rrn3B2RS91 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC18.06■□□□□ 0.48
Rrn3B2RS91 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Rrn3B2RS91 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Rrn3B2RS91 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Rrn3B2RS91 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Rrn3B2RS91 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
Rrn3B2RS91 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Rrn3B2RS91 Gm15847-201ENSMUST00000121417 1065 ntBASIC18.06■□□□□ 0.48
Rrn3B2RS91 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Rrn3B2RS91 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Rrn3B2RS91 Trmt13-210ENSMUST00000198454 880 ntBASIC18.06■□□□□ 0.48
Rrn3B2RS91 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC18.06■□□□□ 0.48
Rrn3B2RS91 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 24.9 ms