Protein–RNA interactions for Protein: B1AVK5

Col4a6, Collagen, type IV, alpha 6, mousemouse

Predictions only

Length 1,691 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a6B1AVK5 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Col4a6B1AVK5 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Col4a6B1AVK5 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Col4a6B1AVK5 Gm7856-201ENSMUST00000117514 1493 ntBASIC18.67■□□□□ 0.58
Col4a6B1AVK5 Gm9885-202ENSMUST00000186234 2209 ntBASIC18.67■□□□□ 0.58
Col4a6B1AVK5 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Col4a6B1AVK5 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Col4a6B1AVK5 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Col4a6B1AVK5 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Col4a6B1AVK5 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Col4a6B1AVK5 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Col4a6B1AVK5 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Col4a6B1AVK5 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Col4a6B1AVK5 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Col4a6B1AVK5 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Col4a6B1AVK5 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Col4a6B1AVK5 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Col4a6B1AVK5 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Col4a6B1AVK5 Gm24841-201ENSMUST00000158676 357 ntBASIC18.66■□□□□ 0.58
Col4a6B1AVK5 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Col4a6B1AVK5 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Col4a6B1AVK5 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Col4a6B1AVK5 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Col4a6B1AVK5 Gm7638-201ENSMUST00000121348 967 ntBASIC18.66■□□□□ 0.58
Col4a6B1AVK5 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC18.66■□□□□ 0.58
Col4a6B1AVK5 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC18.66■□□□□ 0.58
Col4a6B1AVK5 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Col4a6B1AVK5 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Col4a6B1AVK5 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC18.65■□□□□ 0.58
Col4a6B1AVK5 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Col4a6B1AVK5 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Col4a6B1AVK5 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
Col4a6B1AVK5 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Col4a6B1AVK5 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Col4a6B1AVK5 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Col4a6B1AVK5 Gm17661-201ENSMUST00000170317 270 ntBASIC18.65■□□□□ 0.58
Col4a6B1AVK5 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC18.65■□□□□ 0.58
Col4a6B1AVK5 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Col4a6B1AVK5 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
Col4a6B1AVK5 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
Col4a6B1AVK5 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Col4a6B1AVK5 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
Col4a6B1AVK5 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Col4a6B1AVK5 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.58
Col4a6B1AVK5 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC18.64■□□□□ 0.57
Col4a6B1AVK5 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC18.64■□□□□ 0.57
Col4a6B1AVK5 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Col4a6B1AVK5 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Col4a6B1AVK5 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC18.64■□□□□ 0.57
Col4a6B1AVK5 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Col4a6B1AVK5 Gsg1-201ENSMUST00000087729 1307 ntAPPRIS P4 TSL 1 (best) BASIC18.64■□□□□ 0.57
Col4a6B1AVK5 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Col4a6B1AVK5 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Col4a6B1AVK5 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Col4a6B1AVK5 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Col4a6B1AVK5 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
Col4a6B1AVK5 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Col4a6B1AVK5 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
Col4a6B1AVK5 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Col4a6B1AVK5 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
Col4a6B1AVK5 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Col4a6B1AVK5 Gm9694-201ENSMUST00000193347 1189 ntBASIC18.63■□□□□ 0.57
Col4a6B1AVK5 Tgds-204ENSMUST00000228543 1594 ntBASIC18.63■□□□□ 0.57
Col4a6B1AVK5 Bex3-201ENSMUST00000053540 930 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
Col4a6B1AVK5 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Col4a6B1AVK5 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Col4a6B1AVK5 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC18.63■□□□□ 0.57
Col4a6B1AVK5 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
Col4a6B1AVK5 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC18.63■□□□□ 0.57
Col4a6B1AVK5 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Col4a6B1AVK5 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Col4a6B1AVK5 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
Col4a6B1AVK5 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC18.62■□□□□ 0.57
Col4a6B1AVK5 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Col4a6B1AVK5 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Col4a6B1AVK5 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Col4a6B1AVK5 Mir1668-201ENSMUST00000184114 107 ntBASIC18.62■□□□□ 0.57
Col4a6B1AVK5 Gm5587-201ENSMUST00000206270 674 ntBASIC18.62■□□□□ 0.57
Col4a6B1AVK5 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Col4a6B1AVK5 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Col4a6B1AVK5 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Col4a6B1AVK5 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Col4a6B1AVK5 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Col4a6B1AVK5 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
Col4a6B1AVK5 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Col4a6B1AVK5 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Col4a6B1AVK5 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Col4a6B1AVK5 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC18.61■□□□□ 0.57
Col4a6B1AVK5 BC021767-201ENSMUST00000126387 1716 ntBASIC18.61■□□□□ 0.57
Col4a6B1AVK5 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Col4a6B1AVK5 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC18.61■□□□□ 0.57
Col4a6B1AVK5 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
Col4a6B1AVK5 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Col4a6B1AVK5 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Col4a6B1AVK5 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Col4a6B1AVK5 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Col4a6B1AVK5 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Col4a6B1AVK5 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
Col4a6B1AVK5 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Col4a6B1AVK5 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 36 ms