Protein–RNA interactions for Protein: A2A8L1

Chd5, Chromodomain-helicase-DNA-binding protein 5, mousemouse

Predictions only

Length 1,946 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd5A2A8L1 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
Chd5A2A8L1 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Chd5A2A8L1 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC21.04■□□□□ 0.96
Chd5A2A8L1 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Chd5A2A8L1 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Chd5A2A8L1 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
Chd5A2A8L1 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Chd5A2A8L1 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Chd5A2A8L1 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Chd5A2A8L1 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Chd5A2A8L1 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Chd5A2A8L1 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Chd5A2A8L1 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC21.03■□□□□ 0.96
Chd5A2A8L1 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Chd5A2A8L1 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Chd5A2A8L1 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Chd5A2A8L1 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Chd5A2A8L1 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Chd5A2A8L1 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Chd5A2A8L1 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC21.02■□□□□ 0.96
Chd5A2A8L1 Gm27463-201ENSMUST00000183569 57 ntBASIC21.02■□□□□ 0.96
Chd5A2A8L1 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
Chd5A2A8L1 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.96
Chd5A2A8L1 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Chd5A2A8L1 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Chd5A2A8L1 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC21.02■□□□□ 0.96
Chd5A2A8L1 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
Chd5A2A8L1 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.96
Chd5A2A8L1 Gm45058-201ENSMUST00000205810 766 ntBASIC21.02■□□□□ 0.95
Chd5A2A8L1 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC21.02■□□□□ 0.95
Chd5A2A8L1 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC21.02■□□□□ 0.95
Chd5A2A8L1 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
Chd5A2A8L1 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
Chd5A2A8L1 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC21.01■□□□□ 0.95
Chd5A2A8L1 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Chd5A2A8L1 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Chd5A2A8L1 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Chd5A2A8L1 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Chd5A2A8L1 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Chd5A2A8L1 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Chd5A2A8L1 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC21.01■□□□□ 0.95
Chd5A2A8L1 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
Chd5A2A8L1 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
Chd5A2A8L1 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Chd5A2A8L1 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC21■□□□□ 0.95
Chd5A2A8L1 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
Chd5A2A8L1 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC21■□□□□ 0.95
Chd5A2A8L1 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC21■□□□□ 0.95
Chd5A2A8L1 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC21■□□□□ 0.95
Chd5A2A8L1 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC21■□□□□ 0.95
Chd5A2A8L1 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC21■□□□□ 0.95
Chd5A2A8L1 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Chd5A2A8L1 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Chd5A2A8L1 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Chd5A2A8L1 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
Chd5A2A8L1 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
Chd5A2A8L1 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC20.99■□□□□ 0.95
Chd5A2A8L1 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
Chd5A2A8L1 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Chd5A2A8L1 Gm10013-201ENSMUST00000106074 672 ntBASIC20.99■□□□□ 0.95
Chd5A2A8L1 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Chd5A2A8L1 Gm23634-201ENSMUST00000175071 91 ntBASIC20.99■□□□□ 0.95
Chd5A2A8L1 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Chd5A2A8L1 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Chd5A2A8L1 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Chd5A2A8L1 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
Chd5A2A8L1 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Chd5A2A8L1 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Chd5A2A8L1 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC20.98■□□□□ 0.95
Chd5A2A8L1 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC20.98■□□□□ 0.95
Chd5A2A8L1 Gm10819-201ENSMUST00000099988 561 ntBASIC20.98■□□□□ 0.95
Chd5A2A8L1 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Chd5A2A8L1 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Chd5A2A8L1 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Chd5A2A8L1 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Chd5A2A8L1 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Chd5A2A8L1 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Chd5A2A8L1 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Chd5A2A8L1 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Chd5A2A8L1 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC20.98■□□□□ 0.95
Chd5A2A8L1 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
Chd5A2A8L1 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Chd5A2A8L1 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Chd5A2A8L1 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Chd5A2A8L1 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Chd5A2A8L1 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
Chd5A2A8L1 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Chd5A2A8L1 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Chd5A2A8L1 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Chd5A2A8L1 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
Chd5A2A8L1 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
Chd5A2A8L1 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Chd5A2A8L1 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
Chd5A2A8L1 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
Chd5A2A8L1 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC20.97■□□□□ 0.95
Chd5A2A8L1 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Chd5A2A8L1 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Chd5A2A8L1 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Chd5A2A8L1 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
Chd5A2A8L1 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Retrieved 100 of 76,532 protein–RNA pairs in 74.5 ms