Protein–RNA interactions for Protein: A1A546

Isx, Intestine-specific homeobox, mousemouse

Predictions only

Length 240 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IsxA1A546 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
IsxA1A546 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC16.73■□□□□ 0.27
IsxA1A546 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
IsxA1A546 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
IsxA1A546 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
IsxA1A546 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
IsxA1A546 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
IsxA1A546 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
IsxA1A546 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
IsxA1A546 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
IsxA1A546 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
IsxA1A546 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
IsxA1A546 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC16.73■□□□□ 0.27
IsxA1A546 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
IsxA1A546 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC16.73■□□□□ 0.27
IsxA1A546 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
IsxA1A546 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
IsxA1A546 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
IsxA1A546 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
IsxA1A546 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
IsxA1A546 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
IsxA1A546 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
IsxA1A546 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC16.72■□□□□ 0.27
IsxA1A546 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
IsxA1A546 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
IsxA1A546 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
IsxA1A546 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
IsxA1A546 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
IsxA1A546 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
IsxA1A546 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
IsxA1A546 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
IsxA1A546 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
IsxA1A546 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
IsxA1A546 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
IsxA1A546 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
IsxA1A546 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
IsxA1A546 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
IsxA1A546 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
IsxA1A546 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
IsxA1A546 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
IsxA1A546 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
IsxA1A546 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
IsxA1A546 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
IsxA1A546 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
IsxA1A546 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC16.71■□□□□ 0.27
IsxA1A546 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
IsxA1A546 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
IsxA1A546 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC16.71■□□□□ 0.27
IsxA1A546 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
IsxA1A546 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
IsxA1A546 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
IsxA1A546 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
IsxA1A546 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
IsxA1A546 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
IsxA1A546 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
IsxA1A546 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
IsxA1A546 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
IsxA1A546 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
IsxA1A546 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC16.7■□□□□ 0.26
IsxA1A546 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
IsxA1A546 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
IsxA1A546 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
IsxA1A546 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
IsxA1A546 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
IsxA1A546 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
IsxA1A546 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
IsxA1A546 Gm37166-201ENSMUST00000195473 2474 ntBASIC16.7■□□□□ 0.26
IsxA1A546 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
IsxA1A546 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
IsxA1A546 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
IsxA1A546 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
IsxA1A546 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
IsxA1A546 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC16.69■□□□□ 0.26
IsxA1A546 Dancr-204ENSMUST00000132389 2347 ntBASIC16.69■□□□□ 0.26
IsxA1A546 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
IsxA1A546 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC16.69■□□□□ 0.26
IsxA1A546 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
IsxA1A546 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC16.69■□□□□ 0.26
IsxA1A546 Gm5421-201ENSMUST00000181698 2354 ntBASIC16.69■□□□□ 0.26
IsxA1A546 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
IsxA1A546 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
IsxA1A546 Gm27454-201ENSMUST00000185090 204 ntBASIC16.69■□□□□ 0.26
IsxA1A546 Gm9207-201ENSMUST00000198773 1115 ntBASIC16.69■□□□□ 0.26
IsxA1A546 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
IsxA1A546 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
IsxA1A546 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
IsxA1A546 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
IsxA1A546 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
IsxA1A546 Tgds-204ENSMUST00000228543 1594 ntBASIC16.68■□□□□ 0.26
IsxA1A546 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
IsxA1A546 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
IsxA1A546 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
IsxA1A546 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC16.68■□□□□ 0.26
IsxA1A546 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
IsxA1A546 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
IsxA1A546 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
IsxA1A546 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
IsxA1A546 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
IsxA1A546 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
IsxA1A546 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 36.5 ms