Protein–RNA interactions for Protein: A0AUP1

Ccdc112, Coiled-coil domain-containing protein 112, mousemouse

Predictions only

Length 442 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc112A0AUP1 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Ccdc112A0AUP1 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Ccdc112A0AUP1 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Ccdc112A0AUP1 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Ccdc112A0AUP1 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Ccdc112A0AUP1 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Ccdc112A0AUP1 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Ccdc112A0AUP1 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Ccdc112A0AUP1 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Ccdc112A0AUP1 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Ccdc112A0AUP1 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC20.55■□□□□ 0.88
Ccdc112A0AUP1 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Ccdc112A0AUP1 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Ccdc112A0AUP1 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC20.55■□□□□ 0.88
Ccdc112A0AUP1 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Ccdc112A0AUP1 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Ccdc112A0AUP1 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Ccdc112A0AUP1 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Ccdc112A0AUP1 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Ccdc112A0AUP1 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
Ccdc112A0AUP1 Gm19439-201ENSMUST00000198195 2273 ntBASIC20.54■□□□□ 0.88
Ccdc112A0AUP1 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Ccdc112A0AUP1 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC20.54■□□□□ 0.88
Ccdc112A0AUP1 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Ccdc112A0AUP1 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Ccdc112A0AUP1 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
Ccdc112A0AUP1 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Ccdc112A0AUP1 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Ccdc112A0AUP1 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC20.54■□□□□ 0.88
Ccdc112A0AUP1 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Ccdc112A0AUP1 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Ccdc112A0AUP1 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Ccdc112A0AUP1 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
Ccdc112A0AUP1 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Ccdc112A0AUP1 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Ccdc112A0AUP1 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC20.53■□□□□ 0.88
Ccdc112A0AUP1 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC20.53■□□□□ 0.88
Ccdc112A0AUP1 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC20.53■□□□□ 0.88
Ccdc112A0AUP1 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Ccdc112A0AUP1 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Ccdc112A0AUP1 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Ccdc112A0AUP1 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
Ccdc112A0AUP1 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC20.53■□□□□ 0.88
Ccdc112A0AUP1 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Ccdc112A0AUP1 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Ccdc112A0AUP1 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Ccdc112A0AUP1 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Ccdc112A0AUP1 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Ccdc112A0AUP1 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Ccdc112A0AUP1 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Ccdc112A0AUP1 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
Ccdc112A0AUP1 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Ccdc112A0AUP1 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Ccdc112A0AUP1 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Ccdc112A0AUP1 Gm7514-201ENSMUST00000209475 934 ntBASIC20.52■□□□□ 0.88
Ccdc112A0AUP1 Gm10033-202ENSMUST00000211874 928 ntBASIC20.52■□□□□ 0.88
Ccdc112A0AUP1 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Ccdc112A0AUP1 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Ccdc112A0AUP1 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC20.52■□□□□ 0.88
Ccdc112A0AUP1 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Ccdc112A0AUP1 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Ccdc112A0AUP1 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Ccdc112A0AUP1 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Ccdc112A0AUP1 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.87
Ccdc112A0AUP1 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Ccdc112A0AUP1 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Ccdc112A0AUP1 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Ccdc112A0AUP1 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Ccdc112A0AUP1 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC20.51■□□□□ 0.87
Ccdc112A0AUP1 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Ccdc112A0AUP1 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Ccdc112A0AUP1 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
Ccdc112A0AUP1 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
Ccdc112A0AUP1 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
Ccdc112A0AUP1 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC20.51■□□□□ 0.87
Ccdc112A0AUP1 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC20.51■□□□□ 0.87
Ccdc112A0AUP1 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Ccdc112A0AUP1 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC20.51■□□□□ 0.87
Ccdc112A0AUP1 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
Ccdc112A0AUP1 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Ccdc112A0AUP1 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Ccdc112A0AUP1 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Ccdc112A0AUP1 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
Ccdc112A0AUP1 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
Ccdc112A0AUP1 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Ccdc112A0AUP1 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
Ccdc112A0AUP1 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Ccdc112A0AUP1 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Ccdc112A0AUP1 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Ccdc112A0AUP1 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
Ccdc112A0AUP1 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Ccdc112A0AUP1 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Ccdc112A0AUP1 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Ccdc112A0AUP1 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC20.5■□□□□ 0.87
Ccdc112A0AUP1 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Ccdc112A0AUP1 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Ccdc112A0AUP1 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
Ccdc112A0AUP1 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Ccdc112A0AUP1 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC20.5■□□□□ 0.87
Ccdc112A0AUP1 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 21.4 ms