Protein–RNA interactions for Protein: A0A1B0GSS6

Gm3854, Predicted gene 3854, mousemouse

Predictions only

Length 495 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3854A0A1B0GSS6 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC18.04■□□□□ 0.48
Gm3854A0A1B0GSS6 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
Gm3854A0A1B0GSS6 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC18.04■□□□□ 0.48
Gm3854A0A1B0GSS6 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Gm3854A0A1B0GSS6 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC18.04■□□□□ 0.48
Gm3854A0A1B0GSS6 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC18.04■□□□□ 0.48
Gm3854A0A1B0GSS6 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Gm3854A0A1B0GSS6 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Gm3854A0A1B0GSS6 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
Gm3854A0A1B0GSS6 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Gm3854A0A1B0GSS6 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC18.04■□□□□ 0.48
Gm3854A0A1B0GSS6 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Gm3854A0A1B0GSS6 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Gm3854A0A1B0GSS6 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Gm3854A0A1B0GSS6 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Gm3854A0A1B0GSS6 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
Gm3854A0A1B0GSS6 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC18.03■□□□□ 0.48
Gm3854A0A1B0GSS6 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC18.03■□□□□ 0.48
Gm3854A0A1B0GSS6 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC18.03■□□□□ 0.48
Gm3854A0A1B0GSS6 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
Gm3854A0A1B0GSS6 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Gm3854A0A1B0GSS6 Gm12085-201ENSMUST00000119263 940 ntBASIC18.03■□□□□ 0.48
Gm3854A0A1B0GSS6 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Gm3854A0A1B0GSS6 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC18.03■□□□□ 0.48
Gm3854A0A1B0GSS6 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC18.03■□□□□ 0.48
Gm3854A0A1B0GSS6 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC18.03■□□□□ 0.48
Gm3854A0A1B0GSS6 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC18.03■□□□□ 0.48
Gm3854A0A1B0GSS6 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Gm3854A0A1B0GSS6 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Gm3854A0A1B0GSS6 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
Gm3854A0A1B0GSS6 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Gm3854A0A1B0GSS6 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
Gm3854A0A1B0GSS6 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Gm3854A0A1B0GSS6 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Gm3854A0A1B0GSS6 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC18.02■□□□□ 0.48
Gm3854A0A1B0GSS6 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC18.02■□□□□ 0.48
Gm3854A0A1B0GSS6 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Gm3854A0A1B0GSS6 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Gm3854A0A1B0GSS6 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Gm3854A0A1B0GSS6 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC18.02■□□□□ 0.48
Gm3854A0A1B0GSS6 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Gm3854A0A1B0GSS6 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Gm3854A0A1B0GSS6 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Gm3854A0A1B0GSS6 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC18.02■□□□□ 0.48
Gm3854A0A1B0GSS6 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Gm3854A0A1B0GSS6 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Gm3854A0A1B0GSS6 Hsf1-204ENSMUST00000226872 2104 ntBASIC18.02■□□□□ 0.47
Gm3854A0A1B0GSS6 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Gm3854A0A1B0GSS6 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Gm3854A0A1B0GSS6 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Gm3854A0A1B0GSS6 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
Gm3854A0A1B0GSS6 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC18.02■□□□□ 0.47
Gm3854A0A1B0GSS6 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Gm3854A0A1B0GSS6 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC18.02■□□□□ 0.47
Gm3854A0A1B0GSS6 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Gm3854A0A1B0GSS6 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
Gm3854A0A1B0GSS6 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Gm3854A0A1B0GSS6 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Gm3854A0A1B0GSS6 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Gm3854A0A1B0GSS6 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Gm3854A0A1B0GSS6 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Gm3854A0A1B0GSS6 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Gm3854A0A1B0GSS6 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
Gm3854A0A1B0GSS6 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Gm3854A0A1B0GSS6 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Gm3854A0A1B0GSS6 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Gm3854A0A1B0GSS6 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Gm3854A0A1B0GSS6 Mir2861-201ENSMUST00000175539 82 ntBASIC18.01■□□□□ 0.47
Gm3854A0A1B0GSS6 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Gm3854A0A1B0GSS6 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Gm3854A0A1B0GSS6 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Gm3854A0A1B0GSS6 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Gm3854A0A1B0GSS6 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Gm3854A0A1B0GSS6 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Gm3854A0A1B0GSS6 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Gm3854A0A1B0GSS6 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC18■□□□□ 0.47
Gm3854A0A1B0GSS6 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Gm3854A0A1B0GSS6 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
Gm3854A0A1B0GSS6 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Gm3854A0A1B0GSS6 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
Gm3854A0A1B0GSS6 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
Gm3854A0A1B0GSS6 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Gm3854A0A1B0GSS6 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC18■□□□□ 0.47
Gm3854A0A1B0GSS6 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Gm3854A0A1B0GSS6 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Gm3854A0A1B0GSS6 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Gm3854A0A1B0GSS6 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Gm3854A0A1B0GSS6 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
Gm3854A0A1B0GSS6 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
Gm3854A0A1B0GSS6 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC17.99■□□□□ 0.47
Gm3854A0A1B0GSS6 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
Gm3854A0A1B0GSS6 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC17.99■□□□□ 0.47
Gm3854A0A1B0GSS6 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
Gm3854A0A1B0GSS6 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Gm3854A0A1B0GSS6 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
Gm3854A0A1B0GSS6 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC17.99■□□□□ 0.47
Gm3854A0A1B0GSS6 Gm6659-201ENSMUST00000174752 547 ntBASIC17.99■□□□□ 0.47
Gm3854A0A1B0GSS6 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Gm3854A0A1B0GSS6 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Gm3854A0A1B0GSS6 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 18.8 ms