Protein–RNA interactions for Protein: A0A140LIT1

Ccdc194, Coiled-coil domain-containing protein 194, mousemouse

Predictions only

Length 234 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc194A0A140LIT1 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Ccdc194A0A140LIT1 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC17.94■□□□□ 0.46
Ccdc194A0A140LIT1 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC17.94■□□□□ 0.46
Ccdc194A0A140LIT1 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
Ccdc194A0A140LIT1 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
Ccdc194A0A140LIT1 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ccdc194A0A140LIT1 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ccdc194A0A140LIT1 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ccdc194A0A140LIT1 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
Ccdc194A0A140LIT1 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ccdc194A0A140LIT1 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC17.93■□□□□ 0.46
Ccdc194A0A140LIT1 Gm6420-201ENSMUST00000193885 723 ntBASIC17.93■□□□□ 0.46
Ccdc194A0A140LIT1 Ap3s1-204ENSMUST00000225520 957 ntBASIC17.93■□□□□ 0.46
Ccdc194A0A140LIT1 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC17.93■□□□□ 0.46
Ccdc194A0A140LIT1 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC17.93■□□□□ 0.46
Ccdc194A0A140LIT1 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ccdc194A0A140LIT1 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ccdc194A0A140LIT1 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ccdc194A0A140LIT1 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
Ccdc194A0A140LIT1 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ccdc194A0A140LIT1 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ccdc194A0A140LIT1 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
Ccdc194A0A140LIT1 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC17.92■□□□□ 0.46
Ccdc194A0A140LIT1 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ccdc194A0A140LIT1 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ccdc194A0A140LIT1 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
Ccdc194A0A140LIT1 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ccdc194A0A140LIT1 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC17.92■□□□□ 0.46
Ccdc194A0A140LIT1 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC17.92■□□□□ 0.46
Ccdc194A0A140LIT1 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ccdc194A0A140LIT1 Nespas-201ENSMUST00000143738 1083 ntBASIC17.92■□□□□ 0.46
Ccdc194A0A140LIT1 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ccdc194A0A140LIT1 Gm18671-201ENSMUST00000214826 683 ntBASIC17.92■□□□□ 0.46
Ccdc194A0A140LIT1 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Ccdc194A0A140LIT1 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
Ccdc194A0A140LIT1 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC17.92■□□□□ 0.46
Ccdc194A0A140LIT1 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ccdc194A0A140LIT1 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ccdc194A0A140LIT1 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Ccdc194A0A140LIT1 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ccdc194A0A140LIT1 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
Ccdc194A0A140LIT1 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ccdc194A0A140LIT1 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ccdc194A0A140LIT1 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ccdc194A0A140LIT1 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC17.91■□□□□ 0.46
Ccdc194A0A140LIT1 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Ccdc194A0A140LIT1 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ccdc194A0A140LIT1 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ccdc194A0A140LIT1 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC17.91■□□□□ 0.46
Ccdc194A0A140LIT1 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC17.91■□□□□ 0.46
Ccdc194A0A140LIT1 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Ccdc194A0A140LIT1 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ccdc194A0A140LIT1 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ccdc194A0A140LIT1 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ccdc194A0A140LIT1 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ccdc194A0A140LIT1 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ccdc194A0A140LIT1 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ccdc194A0A140LIT1 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ccdc194A0A140LIT1 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ccdc194A0A140LIT1 Tgds-204ENSMUST00000228543 1594 ntBASIC17.91■□□□□ 0.46
Ccdc194A0A140LIT1 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ccdc194A0A140LIT1 Gm44832-201ENSMUST00000208849 2303 ntBASIC17.9■□□□□ 0.46
Ccdc194A0A140LIT1 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ccdc194A0A140LIT1 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Ccdc194A0A140LIT1 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ccdc194A0A140LIT1 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
Ccdc194A0A140LIT1 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC17.9■□□□□ 0.46
Ccdc194A0A140LIT1 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC17.9■□□□□ 0.46
Ccdc194A0A140LIT1 Gm7514-201ENSMUST00000209475 934 ntBASIC17.9■□□□□ 0.46
Ccdc194A0A140LIT1 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ccdc194A0A140LIT1 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
Ccdc194A0A140LIT1 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ccdc194A0A140LIT1 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
Ccdc194A0A140LIT1 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ccdc194A0A140LIT1 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ccdc194A0A140LIT1 Gm5828-201ENSMUST00000071842 1860 ntBASIC17.9■□□□□ 0.46
Ccdc194A0A140LIT1 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
Ccdc194A0A140LIT1 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
Ccdc194A0A140LIT1 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ccdc194A0A140LIT1 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC17.89■□□□□ 0.46
Ccdc194A0A140LIT1 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
Ccdc194A0A140LIT1 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
Ccdc194A0A140LIT1 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
Ccdc194A0A140LIT1 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC17.89■□□□□ 0.46
Ccdc194A0A140LIT1 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.46
Ccdc194A0A140LIT1 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
Ccdc194A0A140LIT1 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
Ccdc194A0A140LIT1 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Ccdc194A0A140LIT1 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Ccdc194A0A140LIT1 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
Ccdc194A0A140LIT1 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Ccdc194A0A140LIT1 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC17.89■□□□□ 0.45
Ccdc194A0A140LIT1 Gm22325-201ENSMUST00000158904 308 ntBASIC17.89■□□□□ 0.45
Ccdc194A0A140LIT1 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC17.89■□□□□ 0.45
Ccdc194A0A140LIT1 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Ccdc194A0A140LIT1 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Ccdc194A0A140LIT1 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Ccdc194A0A140LIT1 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Ccdc194A0A140LIT1 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
Ccdc194A0A140LIT1 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC17.88■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 17.4 ms