Protein–RNA interactions for Protein: A0A0G2JG37

Trav9d-4, T cell receptor alpha variable 9D-4 (Fragment), mousemouse

Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9d-4A0A0G2JG37 Baz1b-201ENSMUST00000002825 6492 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav9d-4A0A0G2JG37 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav9d-4A0A0G2JG37 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav9d-4A0A0G2JG37 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC12.36□□□□□ -0.43
Trav9d-4A0A0G2JG37 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC12.36□□□□□ -0.43
Trav9d-4A0A0G2JG37 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC12.36□□□□□ -0.43
Trav9d-4A0A0G2JG37 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Trav9d-4A0A0G2JG37 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav9d-4A0A0G2JG37 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav9d-4A0A0G2JG37 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav9d-4A0A0G2JG37 Gxylt2-201ENSMUST00000032157 7658 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav9d-4A0A0G2JG37 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav9d-4A0A0G2JG37 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Trav9d-4A0A0G2JG37 Fcho2-208ENSMUST00000224992 2964 ntBASIC12.36□□□□□ -0.43
Trav9d-4A0A0G2JG37 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav9d-4A0A0G2JG37 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav9d-4A0A0G2JG37 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav9d-4A0A0G2JG37 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC12.35□□□□□ -0.43
Trav9d-4A0A0G2JG37 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC12.35□□□□□ -0.43
Trav9d-4A0A0G2JG37 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav9d-4A0A0G2JG37 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav9d-4A0A0G2JG37 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav9d-4A0A0G2JG37 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav9d-4A0A0G2JG37 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Trav9d-4A0A0G2JG37 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC12.35□□□□□ -0.43
Trav9d-4A0A0G2JG37 Appbp2-201ENSMUST00000018625 6463 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav9d-4A0A0G2JG37 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC12.35□□□□□ -0.43
Trav9d-4A0A0G2JG37 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Trav9d-4A0A0G2JG37 Gm12922-201ENSMUST00000120626 809 ntBASIC12.35□□□□□ -0.43
Trav9d-4A0A0G2JG37 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC12.35□□□□□ -0.43
Trav9d-4A0A0G2JG37 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav9d-4A0A0G2JG37 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav9d-4A0A0G2JG37 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Trav9d-4A0A0G2JG37 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC12.35□□□□□ -0.43
Trav9d-4A0A0G2JG37 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav9d-4A0A0G2JG37 Zcchc6-207ENSMUST00000225576 2499 ntBASIC12.35□□□□□ -0.43
Trav9d-4A0A0G2JG37 Gm45906-201ENSMUST00000208911 1430 ntBASIC12.35□□□□□ -0.43
Trav9d-4A0A0G2JG37 Camta1-202ENSMUST00000097774 8533 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Trav9d-4A0A0G2JG37 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC12.35□□□□□ -0.43
Trav9d-4A0A0G2JG37 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav9d-4A0A0G2JG37 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav9d-4A0A0G2JG37 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav9d-4A0A0G2JG37 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
Trav9d-4A0A0G2JG37 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav9d-4A0A0G2JG37 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav9d-4A0A0G2JG37 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC12.34□□□□□ -0.43
Trav9d-4A0A0G2JG37 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav9d-4A0A0G2JG37 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC12.34□□□□□ -0.43
Trav9d-4A0A0G2JG37 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav9d-4A0A0G2JG37 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav9d-4A0A0G2JG37 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav9d-4A0A0G2JG37 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav9d-4A0A0G2JG37 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav9d-4A0A0G2JG37 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav9d-4A0A0G2JG37 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Trav9d-4A0A0G2JG37 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav9d-4A0A0G2JG37 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Trav9d-4A0A0G2JG37 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Trav9d-4A0A0G2JG37 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav9d-4A0A0G2JG37 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav9d-4A0A0G2JG37 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav9d-4A0A0G2JG37 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav9d-4A0A0G2JG37 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav9d-4A0A0G2JG37 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav9d-4A0A0G2JG37 AC121598.2-201ENSMUST00000228376 2325 ntBASIC12.33□□□□□ -0.44
Trav9d-4A0A0G2JG37 Cep85l-205ENSMUST00000220443 7425 ntAPPRIS P2 TSL 5 BASIC12.33□□□□□ -0.44
Trav9d-4A0A0G2JG37 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav9d-4A0A0G2JG37 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav9d-4A0A0G2JG37 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Trav9d-4A0A0G2JG37 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav9d-4A0A0G2JG37 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Trav9d-4A0A0G2JG37 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC12.33□□□□□ -0.44
Trav9d-4A0A0G2JG37 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav9d-4A0A0G2JG37 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav9d-4A0A0G2JG37 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav9d-4A0A0G2JG37 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav9d-4A0A0G2JG37 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC12.33□□□□□ -0.44
Trav9d-4A0A0G2JG37 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC12.33□□□□□ -0.44
Trav9d-4A0A0G2JG37 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav9d-4A0A0G2JG37 Dlg5-202ENSMUST00000073687 7784 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Trav9d-4A0A0G2JG37 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC12.33□□□□□ -0.44
Trav9d-4A0A0G2JG37 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav9d-4A0A0G2JG37 Agap1-202ENSMUST00000074945 10069 ntTSL 5 BASIC12.32□□□□□ -0.44
Trav9d-4A0A0G2JG37 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav9d-4A0A0G2JG37 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav9d-4A0A0G2JG37 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav9d-4A0A0G2JG37 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Trav9d-4A0A0G2JG37 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav9d-4A0A0G2JG37 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC12.32□□□□□ -0.44
Trav9d-4A0A0G2JG37 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav9d-4A0A0G2JG37 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC12.32□□□□□ -0.44
Trav9d-4A0A0G2JG37 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav9d-4A0A0G2JG37 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC12.32□□□□□ -0.44
Trav9d-4A0A0G2JG37 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC12.32□□□□□ -0.44
Trav9d-4A0A0G2JG37 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
Trav9d-4A0A0G2JG37 Golgb1-201ENSMUST00000023534 498 ntBASIC12.32□□□□□ -0.44
Trav9d-4A0A0G2JG37 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav9d-4A0A0G2JG37 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC12.32□□□□□ -0.44
Trav9d-4A0A0G2JG37 Fam160b1-201ENSMUST00000036407 5630 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav9d-4A0A0G2JG37 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC12.32□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 66.8 ms