Protein–RNA interactions for Protein: A0A075B6B9

Trav6d-5, T cell receptor alpha variable 6D-5 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6d-5A0A075B6B9 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav6d-5A0A075B6B9 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav6d-5A0A075B6B9 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Trav6d-5A0A075B6B9 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav6d-5A0A075B6B9 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav6d-5A0A075B6B9 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav6d-5A0A075B6B9 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav6d-5A0A075B6B9 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav6d-5A0A075B6B9 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav6d-5A0A075B6B9 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Trav6d-5A0A075B6B9 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav6d-5A0A075B6B9 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav6d-5A0A075B6B9 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav6d-5A0A075B6B9 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav6d-5A0A075B6B9 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav6d-5A0A075B6B9 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav6d-5A0A075B6B9 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav6d-5A0A075B6B9 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav6d-5A0A075B6B9 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Trav6d-5A0A075B6B9 Gm38205-201ENSMUST00000192243 258 ntBASIC14.56□□□□□ -0.08
Trav6d-5A0A075B6B9 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav6d-5A0A075B6B9 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
Trav6d-5A0A075B6B9 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav6d-5A0A075B6B9 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav6d-5A0A075B6B9 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav6d-5A0A075B6B9 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav6d-5A0A075B6B9 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Trav6d-5A0A075B6B9 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav6d-5A0A075B6B9 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav6d-5A0A075B6B9 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC14.56□□□□□ -0.08
Trav6d-5A0A075B6B9 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Trav6d-5A0A075B6B9 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Trav6d-5A0A075B6B9 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav6d-5A0A075B6B9 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav6d-5A0A075B6B9 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav6d-5A0A075B6B9 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Trav6d-5A0A075B6B9 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav6d-5A0A075B6B9 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav6d-5A0A075B6B9 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Trav6d-5A0A075B6B9 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav6d-5A0A075B6B9 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC14.55□□□□□ -0.08
Trav6d-5A0A075B6B9 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav6d-5A0A075B6B9 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Trav6d-5A0A075B6B9 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
Trav6d-5A0A075B6B9 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav6d-5A0A075B6B9 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
Trav6d-5A0A075B6B9 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav6d-5A0A075B6B9 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav6d-5A0A075B6B9 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav6d-5A0A075B6B9 Gm14117-201ENSMUST00000122417 843 ntBASIC14.55□□□□□ -0.08
Trav6d-5A0A075B6B9 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
Trav6d-5A0A075B6B9 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav6d-5A0A075B6B9 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC14.55□□□□□ -0.08
Trav6d-5A0A075B6B9 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav6d-5A0A075B6B9 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav6d-5A0A075B6B9 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav6d-5A0A075B6B9 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav6d-5A0A075B6B9 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav6d-5A0A075B6B9 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav6d-5A0A075B6B9 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav6d-5A0A075B6B9 Gm38345-201ENSMUST00000192635 1748 ntBASIC14.55□□□□□ -0.08
Trav6d-5A0A075B6B9 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav6d-5A0A075B6B9 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav6d-5A0A075B6B9 Gm37519-201ENSMUST00000191687 2210 ntBASIC14.54□□□□□ -0.08
Trav6d-5A0A075B6B9 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav6d-5A0A075B6B9 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav6d-5A0A075B6B9 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav6d-5A0A075B6B9 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
Trav6d-5A0A075B6B9 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav6d-5A0A075B6B9 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav6d-5A0A075B6B9 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav6d-5A0A075B6B9 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Trav6d-5A0A075B6B9 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC14.54□□□□□ -0.08
Trav6d-5A0A075B6B9 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav6d-5A0A075B6B9 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav6d-5A0A075B6B9 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav6d-5A0A075B6B9 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav6d-5A0A075B6B9 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav6d-5A0A075B6B9 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC14.54□□□□□ -0.08
Trav6d-5A0A075B6B9 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
Trav6d-5A0A075B6B9 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav6d-5A0A075B6B9 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav6d-5A0A075B6B9 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav6d-5A0A075B6B9 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav6d-5A0A075B6B9 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Trav6d-5A0A075B6B9 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav6d-5A0A075B6B9 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav6d-5A0A075B6B9 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
Trav6d-5A0A075B6B9 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav6d-5A0A075B6B9 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav6d-5A0A075B6B9 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Trav6d-5A0A075B6B9 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav6d-5A0A075B6B9 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
Trav6d-5A0A075B6B9 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
Trav6d-5A0A075B6B9 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav6d-5A0A075B6B9 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav6d-5A0A075B6B9 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Trav6d-5A0A075B6B9 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav6d-5A0A075B6B9 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Trav6d-5A0A075B6B9 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 42.3 ms