Protein–RNA interactions for Protein: A0A075B6B5

Trav6-5, T cell receptor alpha variable 6-5 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-5A0A075B6B5 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trav6-5A0A075B6B5 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
Trav6-5A0A075B6B5 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC13.97□□□□□ -0.17
Trav6-5A0A075B6B5 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC13.97□□□□□ -0.17
Trav6-5A0A075B6B5 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trav6-5A0A075B6B5 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trav6-5A0A075B6B5 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
Trav6-5A0A075B6B5 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trav6-5A0A075B6B5 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Trav6-5A0A075B6B5 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trav6-5A0A075B6B5 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trav6-5A0A075B6B5 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trav6-5A0A075B6B5 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trav6-5A0A075B6B5 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trav6-5A0A075B6B5 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trav6-5A0A075B6B5 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trav6-5A0A075B6B5 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trav6-5A0A075B6B5 Gm42501-201ENSMUST00000200220 1026 ntBASIC13.96□□□□□ -0.17
Trav6-5A0A075B6B5 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trav6-5A0A075B6B5 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trav6-5A0A075B6B5 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trav6-5A0A075B6B5 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC13.96□□□□□ -0.17
Trav6-5A0A075B6B5 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trav6-5A0A075B6B5 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
Trav6-5A0A075B6B5 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.18
Trav6-5A0A075B6B5 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Trav6-5A0A075B6B5 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
Trav6-5A0A075B6B5 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
Trav6-5A0A075B6B5 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trav6-5A0A075B6B5 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trav6-5A0A075B6B5 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC13.95□□□□□ -0.18
Trav6-5A0A075B6B5 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trav6-5A0A075B6B5 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trav6-5A0A075B6B5 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trav6-5A0A075B6B5 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
Trav6-5A0A075B6B5 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
Trav6-5A0A075B6B5 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trav6-5A0A075B6B5 Gm37374-201ENSMUST00000194954 1829 ntBASIC13.95□□□□□ -0.18
Trav6-5A0A075B6B5 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trav6-5A0A075B6B5 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC13.95□□□□□ -0.18
Trav6-5A0A075B6B5 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC13.95□□□□□ -0.18
Trav6-5A0A075B6B5 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC13.95□□□□□ -0.18
Trav6-5A0A075B6B5 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trav6-5A0A075B6B5 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trav6-5A0A075B6B5 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trav6-5A0A075B6B5 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trav6-5A0A075B6B5 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
Trav6-5A0A075B6B5 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC13.95□□□□□ -0.18
Trav6-5A0A075B6B5 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
Trav6-5A0A075B6B5 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trav6-5A0A075B6B5 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trav6-5A0A075B6B5 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trav6-5A0A075B6B5 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trav6-5A0A075B6B5 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trav6-5A0A075B6B5 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Trav6-5A0A075B6B5 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trav6-5A0A075B6B5 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trav6-5A0A075B6B5 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trav6-5A0A075B6B5 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trav6-5A0A075B6B5 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trav6-5A0A075B6B5 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
Trav6-5A0A075B6B5 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trav6-5A0A075B6B5 Gm22238-201ENSMUST00000175222 88 ntBASIC13.94□□□□□ -0.18
Trav6-5A0A075B6B5 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC13.94□□□□□ -0.18
Trav6-5A0A075B6B5 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trav6-5A0A075B6B5 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trav6-5A0A075B6B5 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
Trav6-5A0A075B6B5 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Trav6-5A0A075B6B5 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trav6-5A0A075B6B5 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trav6-5A0A075B6B5 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trav6-5A0A075B6B5 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trav6-5A0A075B6B5 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC13.94□□□□□ -0.18
Trav6-5A0A075B6B5 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
Trav6-5A0A075B6B5 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
Trav6-5A0A075B6B5 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC13.94□□□□□ -0.18
Trav6-5A0A075B6B5 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trav6-5A0A075B6B5 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trav6-5A0A075B6B5 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trav6-5A0A075B6B5 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC13.93□□□□□ -0.18
Trav6-5A0A075B6B5 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trav6-5A0A075B6B5 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trav6-5A0A075B6B5 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trav6-5A0A075B6B5 Gm28265-201ENSMUST00000188201 2319 ntBASIC13.93□□□□□ -0.18
Trav6-5A0A075B6B5 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Trav6-5A0A075B6B5 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trav6-5A0A075B6B5 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
Trav6-5A0A075B6B5 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
Trav6-5A0A075B6B5 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trav6-5A0A075B6B5 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trav6-5A0A075B6B5 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trav6-5A0A075B6B5 Gm42918-201ENSMUST00000199249 1580 ntBASIC13.92□□□□□ -0.18
Trav6-5A0A075B6B5 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trav6-5A0A075B6B5 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trav6-5A0A075B6B5 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trav6-5A0A075B6B5 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
Trav6-5A0A075B6B5 Gm19094-201ENSMUST00000209791 1246 ntBASIC13.92□□□□□ -0.18
Trav6-5A0A075B6B5 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trav6-5A0A075B6B5 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trav6-5A0A075B6B5 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 119 ms