Protein–RNA interactions for Protein: A0A075B6B4

Trav6-4, T cell receptor alpha variable 6-4 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-4A0A075B6B4 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav6-4A0A075B6B4 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC13.88□□□□□ -0.19
Trav6-4A0A075B6B4 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Trav6-4A0A075B6B4 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav6-4A0A075B6B4 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC13.88□□□□□ -0.19
Trav6-4A0A075B6B4 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
Trav6-4A0A075B6B4 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC13.88□□□□□ -0.19
Trav6-4A0A075B6B4 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
Trav6-4A0A075B6B4 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav6-4A0A075B6B4 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav6-4A0A075B6B4 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav6-4A0A075B6B4 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav6-4A0A075B6B4 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav6-4A0A075B6B4 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav6-4A0A075B6B4 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav6-4A0A075B6B4 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav6-4A0A075B6B4 Gm2399-201ENSMUST00000104944 225 ntBASIC13.87□□□□□ -0.19
Trav6-4A0A075B6B4 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
Trav6-4A0A075B6B4 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC13.87□□□□□ -0.19
Trav6-4A0A075B6B4 AC122769.4-201ENSMUST00000228166 901 ntBASIC13.87□□□□□ -0.19
Trav6-4A0A075B6B4 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav6-4A0A075B6B4 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav6-4A0A075B6B4 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav6-4A0A075B6B4 Gm38308-201ENSMUST00000194934 1809 ntBASIC13.87□□□□□ -0.19
Trav6-4A0A075B6B4 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav6-4A0A075B6B4 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC13.87□□□□□ -0.19
Trav6-4A0A075B6B4 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
Trav6-4A0A075B6B4 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
Trav6-4A0A075B6B4 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC13.87□□□□□ -0.19
Trav6-4A0A075B6B4 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav6-4A0A075B6B4 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Trav6-4A0A075B6B4 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Trav6-4A0A075B6B4 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav6-4A0A075B6B4 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav6-4A0A075B6B4 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC13.86□□□□□ -0.19
Trav6-4A0A075B6B4 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav6-4A0A075B6B4 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav6-4A0A075B6B4 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav6-4A0A075B6B4 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav6-4A0A075B6B4 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav6-4A0A075B6B4 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Trav6-4A0A075B6B4 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav6-4A0A075B6B4 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav6-4A0A075B6B4 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC13.86□□□□□ -0.19
Trav6-4A0A075B6B4 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
Trav6-4A0A075B6B4 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC13.86□□□□□ -0.19
Trav6-4A0A075B6B4 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC13.86□□□□□ -0.19
Trav6-4A0A075B6B4 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Trav6-4A0A075B6B4 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
Trav6-4A0A075B6B4 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC13.86□□□□□ -0.19
Trav6-4A0A075B6B4 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC13.86□□□□□ -0.19
Trav6-4A0A075B6B4 Gm43859-201ENSMUST00000200075 1412 ntBASIC13.86□□□□□ -0.19
Trav6-4A0A075B6B4 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav6-4A0A075B6B4 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav6-4A0A075B6B4 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Trav6-4A0A075B6B4 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav6-4A0A075B6B4 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC13.85□□□□□ -0.19
Trav6-4A0A075B6B4 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trav6-4A0A075B6B4 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trav6-4A0A075B6B4 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
Trav6-4A0A075B6B4 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trav6-4A0A075B6B4 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trav6-4A0A075B6B4 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC13.85□□□□□ -0.19
Trav6-4A0A075B6B4 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC13.85□□□□□ -0.19
Trav6-4A0A075B6B4 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trav6-4A0A075B6B4 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC13.85□□□□□ -0.19
Trav6-4A0A075B6B4 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
Trav6-4A0A075B6B4 Gm4968-201ENSMUST00000071458 858 ntBASIC13.85□□□□□ -0.19
Trav6-4A0A075B6B4 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
Trav6-4A0A075B6B4 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trav6-4A0A075B6B4 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trav6-4A0A075B6B4 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trav6-4A0A075B6B4 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trav6-4A0A075B6B4 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trav6-4A0A075B6B4 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trav6-4A0A075B6B4 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trav6-4A0A075B6B4 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trav6-4A0A075B6B4 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trav6-4A0A075B6B4 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trav6-4A0A075B6B4 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
Trav6-4A0A075B6B4 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Trav6-4A0A075B6B4 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
Trav6-4A0A075B6B4 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
Trav6-4A0A075B6B4 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Trav6-4A0A075B6B4 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Trav6-4A0A075B6B4 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Trav6-4A0A075B6B4 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC13.84□□□□□ -0.19
Trav6-4A0A075B6B4 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trav6-4A0A075B6B4 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Trav6-4A0A075B6B4 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Trav6-4A0A075B6B4 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trav6-4A0A075B6B4 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trav6-4A0A075B6B4 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trav6-4A0A075B6B4 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Trav6-4A0A075B6B4 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
Trav6-4A0A075B6B4 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trav6-4A0A075B6B4 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Trav6-4A0A075B6B4 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Trav6-4A0A075B6B4 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.19
Trav6-4A0A075B6B4 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 22.9 ms