Protein–RNA interactions for Protein: A0A075B6A6

Trav6n-7, T cell receptor alpha variable 6N-7 (Fragment), mousemouse

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6n-7A0A075B6A6 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trav6n-7A0A075B6A6 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trav6n-7A0A075B6A6 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trav6n-7A0A075B6A6 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC15.3■□□□□ 0.04
Trav6n-7A0A075B6A6 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Trav6n-7A0A075B6A6 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Trav6n-7A0A075B6A6 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Trav6n-7A0A075B6A6 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trav6n-7A0A075B6A6 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC15.29■□□□□ 0.04
Trav6n-7A0A075B6A6 Gm12896-201ENSMUST00000118430 226 ntBASIC15.29■□□□□ 0.04
Trav6n-7A0A075B6A6 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trav6n-7A0A075B6A6 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC15.29■□□□□ 0.04
Trav6n-7A0A075B6A6 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC15.29■□□□□ 0.04
Trav6n-7A0A075B6A6 Wnt10b-205ENSMUST00000226846 1204 ntBASIC15.29■□□□□ 0.04
Trav6n-7A0A075B6A6 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trav6n-7A0A075B6A6 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trav6n-7A0A075B6A6 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC15.29■□□□□ 0.04
Trav6n-7A0A075B6A6 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
Trav6n-7A0A075B6A6 Gm35558-201ENSMUST00000222675 2219 ntBASIC15.29■□□□□ 0.04
Trav6n-7A0A075B6A6 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
Trav6n-7A0A075B6A6 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trav6n-7A0A075B6A6 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trav6n-7A0A075B6A6 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trav6n-7A0A075B6A6 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC15.29■□□□□ 0.04
Trav6n-7A0A075B6A6 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trav6n-7A0A075B6A6 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trav6n-7A0A075B6A6 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trav6n-7A0A075B6A6 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trav6n-7A0A075B6A6 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trav6n-7A0A075B6A6 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trav6n-7A0A075B6A6 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trav6n-7A0A075B6A6 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trav6n-7A0A075B6A6 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
Trav6n-7A0A075B6A6 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trav6n-7A0A075B6A6 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC15.28■□□□□ 0.04
Trav6n-7A0A075B6A6 Gm20049-201ENSMUST00000219950 730 ntBASIC15.28■□□□□ 0.04
Trav6n-7A0A075B6A6 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Trav6n-7A0A075B6A6 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trav6n-7A0A075B6A6 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trav6n-7A0A075B6A6 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Trav6n-7A0A075B6A6 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trav6n-7A0A075B6A6 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trav6n-7A0A075B6A6 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trav6n-7A0A075B6A6 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Trav6n-7A0A075B6A6 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trav6n-7A0A075B6A6 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trav6n-7A0A075B6A6 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Trav6n-7A0A075B6A6 AC123834.2-201ENSMUST00000224038 2340 ntBASIC15.27■□□□□ 0.04
Trav6n-7A0A075B6A6 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC15.27■□□□□ 0.04
Trav6n-7A0A075B6A6 Gm44544-201ENSMUST00000207052 1844 ntBASIC15.27■□□□□ 0.04
Trav6n-7A0A075B6A6 Gm10461-201ENSMUST00000202073 4786 ntBASIC15.27■□□□□ 0.04
Trav6n-7A0A075B6A6 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trav6n-7A0A075B6A6 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trav6n-7A0A075B6A6 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC15.27■□□□□ 0.04
Trav6n-7A0A075B6A6 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trav6n-7A0A075B6A6 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trav6n-7A0A075B6A6 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Trav6n-7A0A075B6A6 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Trav6n-7A0A075B6A6 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Trav6n-7A0A075B6A6 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Trav6n-7A0A075B6A6 Tgds-204ENSMUST00000228543 1594 ntBASIC15.27■□□□□ 0.03
Trav6n-7A0A075B6A6 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trav6n-7A0A075B6A6 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trav6n-7A0A075B6A6 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trav6n-7A0A075B6A6 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trav6n-7A0A075B6A6 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trav6n-7A0A075B6A6 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trav6n-7A0A075B6A6 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC15.26■□□□□ 0.03
Trav6n-7A0A075B6A6 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trav6n-7A0A075B6A6 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trav6n-7A0A075B6A6 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trav6n-7A0A075B6A6 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trav6n-7A0A075B6A6 Fst-202ENSMUST00000223640 2612 ntBASIC15.26■□□□□ 0.03
Trav6n-7A0A075B6A6 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC15.26■□□□□ 0.03
Trav6n-7A0A075B6A6 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trav6n-7A0A075B6A6 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trav6n-7A0A075B6A6 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trav6n-7A0A075B6A6 Zfp783-201ENSMUST00000095946 670 ntBASIC15.26■□□□□ 0.03
Trav6n-7A0A075B6A6 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Trav6n-7A0A075B6A6 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trav6n-7A0A075B6A6 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC15.26■□□□□ 0.03
Trav6n-7A0A075B6A6 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trav6n-7A0A075B6A6 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Trav6n-7A0A075B6A6 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Trav6n-7A0A075B6A6 Dio3-201ENSMUST00000097228 1449 ntBASIC15.26■□□□□ 0.03
Trav6n-7A0A075B6A6 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trav6n-7A0A075B6A6 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC15.25■□□□□ 0.03
Trav6n-7A0A075B6A6 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Trav6n-7A0A075B6A6 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trav6n-7A0A075B6A6 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trav6n-7A0A075B6A6 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
Trav6n-7A0A075B6A6 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
Trav6n-7A0A075B6A6 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC15.25■□□□□ 0.03
Trav6n-7A0A075B6A6 Gm11927-201ENSMUST00000118472 759 ntBASIC15.25■□□□□ 0.03
Trav6n-7A0A075B6A6 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
Trav6n-7A0A075B6A6 Gm38285-201ENSMUST00000192928 922 ntBASIC15.25■□□□□ 0.03
Trav6n-7A0A075B6A6 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trav6n-7A0A075B6A6 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Trav6n-7A0A075B6A6 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trav6n-7A0A075B6A6 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 39.2 ms