Protein–RNA interactions for Protein: A0A075B656

Trav18, T cell receptor alpha variable 18 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav18A0A075B656 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trav18A0A075B656 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Trav18A0A075B656 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trav18A0A075B656 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trav18A0A075B656 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trav18A0A075B656 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
Trav18A0A075B656 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trav18A0A075B656 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trav18A0A075B656 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trav18A0A075B656 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trav18A0A075B656 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Trav18A0A075B656 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
Trav18A0A075B656 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trav18A0A075B656 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trav18A0A075B656 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trav18A0A075B656 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trav18A0A075B656 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC14.74□□□□□ -0.05
Trav18A0A075B656 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trav18A0A075B656 Fcho2-208ENSMUST00000224992 2964 ntBASIC14.74□□□□□ -0.05
Trav18A0A075B656 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Trav18A0A075B656 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trav18A0A075B656 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trav18A0A075B656 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trav18A0A075B656 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Trav18A0A075B656 Gm6420-201ENSMUST00000193885 723 ntBASIC14.74□□□□□ -0.05
Trav18A0A075B656 Ap3s1-204ENSMUST00000225520 957 ntBASIC14.74□□□□□ -0.05
Trav18A0A075B656 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trav18A0A075B656 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trav18A0A075B656 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trav18A0A075B656 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trav18A0A075B656 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trav18A0A075B656 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC14.74□□□□□ -0.05
Trav18A0A075B656 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trav18A0A075B656 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC14.74□□□□□ -0.05
Trav18A0A075B656 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Trav18A0A075B656 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trav18A0A075B656 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trav18A0A075B656 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trav18A0A075B656 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC14.73□□□□□ -0.05
Trav18A0A075B656 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
Trav18A0A075B656 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
Trav18A0A075B656 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trav18A0A075B656 Gm43672-201ENSMUST00000199072 1731 ntBASIC14.73□□□□□ -0.05
Trav18A0A075B656 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trav18A0A075B656 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Trav18A0A075B656 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC14.73□□□□□ -0.05
Trav18A0A075B656 AC099934.2-201ENSMUST00000196389 70 ntBASIC14.73□□□□□ -0.05
Trav18A0A075B656 AC156953.1-201ENSMUST00000196953 70 ntBASIC14.73□□□□□ -0.05
Trav18A0A075B656 AC157822.2-201ENSMUST00000200291 70 ntBASIC14.73□□□□□ -0.05
Trav18A0A075B656 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC14.73□□□□□ -0.05
Trav18A0A075B656 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trav18A0A075B656 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trav18A0A075B656 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trav18A0A075B656 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trav18A0A075B656 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trav18A0A075B656 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC14.73□□□□□ -0.05
Trav18A0A075B656 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Trav18A0A075B656 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC14.73□□□□□ -0.05
Trav18A0A075B656 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC14.73□□□□□ -0.05
Trav18A0A075B656 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
Trav18A0A075B656 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trav18A0A075B656 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Trav18A0A075B656 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Trav18A0A075B656 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav18A0A075B656 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC14.72□□□□□ -0.05
Trav18A0A075B656 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Trav18A0A075B656 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC14.72□□□□□ -0.05
Trav18A0A075B656 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
Trav18A0A075B656 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
Trav18A0A075B656 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
Trav18A0A075B656 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav18A0A075B656 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
Trav18A0A075B656 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav18A0A075B656 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav18A0A075B656 Gm38345-201ENSMUST00000192635 1748 ntBASIC14.72□□□□□ -0.05
Trav18A0A075B656 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC14.72□□□□□ -0.05
Trav18A0A075B656 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Trav18A0A075B656 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trav18A0A075B656 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
Trav18A0A075B656 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trav18A0A075B656 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.05
Trav18A0A075B656 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trav18A0A075B656 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Trav18A0A075B656 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trav18A0A075B656 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trav18A0A075B656 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
Trav18A0A075B656 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC14.71□□□□□ -0.05
Trav18A0A075B656 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Trav18A0A075B656 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trav18A0A075B656 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trav18A0A075B656 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC14.71□□□□□ -0.05
Trav18A0A075B656 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
Trav18A0A075B656 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trav18A0A075B656 Gm10493-201ENSMUST00000097270 612 ntBASIC14.71□□□□□ -0.05
Trav18A0A075B656 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Trav18A0A075B656 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trav18A0A075B656 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trav18A0A075B656 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trav18A0A075B656 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Trav18A0A075B656 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 21.8 ms