Protein–RNA interactions for Protein: A0A075B644

Trav13-1, T cell receptor alpha variable 13-1 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13-1A0A075B644 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav13-1A0A075B644 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Trav13-1A0A075B644 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Trav13-1A0A075B644 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC12.8□□□□□ -0.36
Trav13-1A0A075B644 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Trav13-1A0A075B644 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav13-1A0A075B644 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav13-1A0A075B644 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC12.8□□□□□ -0.36
Trav13-1A0A075B644 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav13-1A0A075B644 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav13-1A0A075B644 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav13-1A0A075B644 Gm27275-201ENSMUST00000184318 272 ntBASIC12.8□□□□□ -0.36
Trav13-1A0A075B644 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Trav13-1A0A075B644 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
Trav13-1A0A075B644 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
Trav13-1A0A075B644 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Trav13-1A0A075B644 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Trav13-1A0A075B644 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
Trav13-1A0A075B644 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav13-1A0A075B644 Rarb-207ENSMUST00000225921 2756 ntBASIC12.8□□□□□ -0.36
Trav13-1A0A075B644 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Trav13-1A0A075B644 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Trav13-1A0A075B644 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav13-1A0A075B644 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav13-1A0A075B644 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav13-1A0A075B644 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Trav13-1A0A075B644 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav13-1A0A075B644 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Trav13-1A0A075B644 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
Trav13-1A0A075B644 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav13-1A0A075B644 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav13-1A0A075B644 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Trav13-1A0A075B644 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Trav13-1A0A075B644 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC12.79□□□□□ -0.36
Trav13-1A0A075B644 Gm44549-201ENSMUST00000208351 577 ntBASIC12.79□□□□□ -0.36
Trav13-1A0A075B644 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC12.79□□□□□ -0.36
Trav13-1A0A075B644 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav13-1A0A075B644 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC12.79□□□□□ -0.36
Trav13-1A0A075B644 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav13-1A0A075B644 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC12.79□□□□□ -0.36
Trav13-1A0A075B644 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav13-1A0A075B644 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC12.78□□□□□ -0.36
Trav13-1A0A075B644 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Trav13-1A0A075B644 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC12.78□□□□□ -0.36
Trav13-1A0A075B644 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav13-1A0A075B644 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav13-1A0A075B644 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav13-1A0A075B644 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav13-1A0A075B644 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav13-1A0A075B644 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav13-1A0A075B644 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Trav13-1A0A075B644 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC12.78□□□□□ -0.36
Trav13-1A0A075B644 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav13-1A0A075B644 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav13-1A0A075B644 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC12.78□□□□□ -0.36
Trav13-1A0A075B644 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav13-1A0A075B644 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav13-1A0A075B644 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav13-1A0A075B644 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav13-1A0A075B644 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav13-1A0A075B644 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Trav13-1A0A075B644 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Trav13-1A0A075B644 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Trav13-1A0A075B644 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Trav13-1A0A075B644 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Trav13-1A0A075B644 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC12.77□□□□□ -0.36
Trav13-1A0A075B644 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Trav13-1A0A075B644 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trav13-1A0A075B644 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trav13-1A0A075B644 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC12.77□□□□□ -0.37
Trav13-1A0A075B644 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Trav13-1A0A075B644 AC124603.1-201ENSMUST00000223843 308 ntBASIC12.77□□□□□ -0.37
Trav13-1A0A075B644 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trav13-1A0A075B644 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Trav13-1A0A075B644 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trav13-1A0A075B644 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trav13-1A0A075B644 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trav13-1A0A075B644 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trav13-1A0A075B644 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trav13-1A0A075B644 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
Trav13-1A0A075B644 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trav13-1A0A075B644 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav13-1A0A075B644 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav13-1A0A075B644 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Trav13-1A0A075B644 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav13-1A0A075B644 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav13-1A0A075B644 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav13-1A0A075B644 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav13-1A0A075B644 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC12.76□□□□□ -0.37
Trav13-1A0A075B644 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC12.76□□□□□ -0.37
Trav13-1A0A075B644 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav13-1A0A075B644 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC12.76□□□□□ -0.37
Trav13-1A0A075B644 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
Trav13-1A0A075B644 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
Trav13-1A0A075B644 Gm10812-201ENSMUST00000099864 546 ntBASIC12.76□□□□□ -0.37
Trav13-1A0A075B644 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav13-1A0A075B644 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav13-1A0A075B644 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Trav13-1A0A075B644 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav13-1A0A075B644 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 21.9 ms