Protein–RNA interactions for Protein: A0A075B624

Trav15d-1-dv6d-1, T cell receptor alpha variable 15D-1-DV6D-1 (Fragment), mousemouse

Predictions only

Length 124 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav15d-1-dv6d-1A0A075B624 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC15.36■□□□□ 0.05
Trav15d-1-dv6d-1A0A075B624 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trav15d-1-dv6d-1A0A075B624 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
Trav15d-1-dv6d-1A0A075B624 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trav15d-1-dv6d-1A0A075B624 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC15.35■□□□□ 0.05
Trav15d-1-dv6d-1A0A075B624 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Trav15d-1-dv6d-1A0A075B624 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trav15d-1-dv6d-1A0A075B624 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trav15d-1-dv6d-1A0A075B624 Gm8309-201ENSMUST00000206627 1448 ntBASIC15.35■□□□□ 0.05
Trav15d-1-dv6d-1A0A075B624 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trav15d-1-dv6d-1A0A075B624 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Trav15d-1-dv6d-1A0A075B624 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trav15d-1-dv6d-1A0A075B624 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
Trav15d-1-dv6d-1A0A075B624 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC15.35■□□□□ 0.05
Trav15d-1-dv6d-1A0A075B624 Gm26971-201ENSMUST00000182423 1072 ntBASIC15.35■□□□□ 0.05
Trav15d-1-dv6d-1A0A075B624 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC15.35■□□□□ 0.05
Trav15d-1-dv6d-1A0A075B624 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC15.35■□□□□ 0.05
Trav15d-1-dv6d-1A0A075B624 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trav15d-1-dv6d-1A0A075B624 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trav15d-1-dv6d-1A0A075B624 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC15.35■□□□□ 0.05
Trav15d-1-dv6d-1A0A075B624 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trav15d-1-dv6d-1A0A075B624 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trav15d-1-dv6d-1A0A075B624 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trav15d-1-dv6d-1A0A075B624 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trav15d-1-dv6d-1A0A075B624 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trav15d-1-dv6d-1A0A075B624 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trav15d-1-dv6d-1A0A075B624 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trav15d-1-dv6d-1A0A075B624 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trav15d-1-dv6d-1A0A075B624 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trav15d-1-dv6d-1A0A075B624 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trav15d-1-dv6d-1A0A075B624 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC15.34■□□□□ 0.05
Trav15d-1-dv6d-1A0A075B624 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trav15d-1-dv6d-1A0A075B624 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Trav15d-1-dv6d-1A0A075B624 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trav15d-1-dv6d-1A0A075B624 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trav15d-1-dv6d-1A0A075B624 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trav15d-1-dv6d-1A0A075B624 Tgds-204ENSMUST00000228543 1594 ntBASIC15.34■□□□□ 0.05
Trav15d-1-dv6d-1A0A075B624 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC15.34■□□□□ 0.05
Trav15d-1-dv6d-1A0A075B624 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC15.34■□□□□ 0.05
Trav15d-1-dv6d-1A0A075B624 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trav15d-1-dv6d-1A0A075B624 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trav15d-1-dv6d-1A0A075B624 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Trav15d-1-dv6d-1A0A075B624 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
Trav15d-1-dv6d-1A0A075B624 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trav15d-1-dv6d-1A0A075B624 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC15.34■□□□□ 0.05
Trav15d-1-dv6d-1A0A075B624 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Trav15d-1-dv6d-1A0A075B624 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trav15d-1-dv6d-1A0A075B624 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
Trav15d-1-dv6d-1A0A075B624 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC15.34■□□□□ 0.05
Trav15d-1-dv6d-1A0A075B624 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC15.34■□□□□ 0.05
Trav15d-1-dv6d-1A0A075B624 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
Trav15d-1-dv6d-1A0A075B624 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC15.33■□□□□ 0.05
Trav15d-1-dv6d-1A0A075B624 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trav15d-1-dv6d-1A0A075B624 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trav15d-1-dv6d-1A0A075B624 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
Trav15d-1-dv6d-1A0A075B624 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trav15d-1-dv6d-1A0A075B624 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Trav15d-1-dv6d-1A0A075B624 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trav15d-1-dv6d-1A0A075B624 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trav15d-1-dv6d-1A0A075B624 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
Trav15d-1-dv6d-1A0A075B624 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Trav15d-1-dv6d-1A0A075B624 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC15.33■□□□□ 0.04
Trav15d-1-dv6d-1A0A075B624 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trav15d-1-dv6d-1A0A075B624 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
Trav15d-1-dv6d-1A0A075B624 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trav15d-1-dv6d-1A0A075B624 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC15.33■□□□□ 0.04
Trav15d-1-dv6d-1A0A075B624 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Trav15d-1-dv6d-1A0A075B624 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trav15d-1-dv6d-1A0A075B624 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trav15d-1-dv6d-1A0A075B624 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC15.33■□□□□ 0.04
Trav15d-1-dv6d-1A0A075B624 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trav15d-1-dv6d-1A0A075B624 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trav15d-1-dv6d-1A0A075B624 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trav15d-1-dv6d-1A0A075B624 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC15.33■□□□□ 0.04
Trav15d-1-dv6d-1A0A075B624 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trav15d-1-dv6d-1A0A075B624 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trav15d-1-dv6d-1A0A075B624 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC15.32■□□□□ 0.04
Trav15d-1-dv6d-1A0A075B624 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trav15d-1-dv6d-1A0A075B624 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC15.32■□□□□ 0.04
Trav15d-1-dv6d-1A0A075B624 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trav15d-1-dv6d-1A0A075B624 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC15.32■□□□□ 0.04
Trav15d-1-dv6d-1A0A075B624 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Trav15d-1-dv6d-1A0A075B624 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC15.32■□□□□ 0.04
Trav15d-1-dv6d-1A0A075B624 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC15.32■□□□□ 0.04
Trav15d-1-dv6d-1A0A075B624 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trav15d-1-dv6d-1A0A075B624 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
Trav15d-1-dv6d-1A0A075B624 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Trav15d-1-dv6d-1A0A075B624 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trav15d-1-dv6d-1A0A075B624 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trav15d-1-dv6d-1A0A075B624 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC15.32■□□□□ 0.04
Trav15d-1-dv6d-1A0A075B624 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trav15d-1-dv6d-1A0A075B624 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trav15d-1-dv6d-1A0A075B624 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
Trav15d-1-dv6d-1A0A075B624 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trav15d-1-dv6d-1A0A075B624 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC15.31■□□□□ 0.04
Trav15d-1-dv6d-1A0A075B624 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trav15d-1-dv6d-1A0A075B624 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC15.31■□□□□ 0.04
Trav15d-1-dv6d-1A0A075B624 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trav15d-1-dv6d-1A0A075B624 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trav15d-1-dv6d-1A0A075B624 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC15.31■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 39.9 ms