Protein–RNA interactions for Protein: A0A075B5Z7

Trav5-1, T cell receptor alpha variable 5-1 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5-1A0A075B5Z7 Gm6576-201ENSMUST00000169678 883 ntBASIC15.48■□□□□ 0.07
Trav5-1A0A075B5Z7 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC15.48■□□□□ 0.07
Trav5-1A0A075B5Z7 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC15.48■□□□□ 0.07
Trav5-1A0A075B5Z7 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Trav5-1A0A075B5Z7 Gm10698-201ENSMUST00000182663 604 ntBASIC15.48■□□□□ 0.07
Trav5-1A0A075B5Z7 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trav5-1A0A075B5Z7 Gm43213-201ENSMUST00000151866 1790 ntBASIC15.48■□□□□ 0.07
Trav5-1A0A075B5Z7 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trav5-1A0A075B5Z7 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trav5-1A0A075B5Z7 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trav5-1A0A075B5Z7 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trav5-1A0A075B5Z7 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC15.48■□□□□ 0.07
Trav5-1A0A075B5Z7 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trav5-1A0A075B5Z7 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trav5-1A0A075B5Z7 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC15.47■□□□□ 0.07
Trav5-1A0A075B5Z7 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Trav5-1A0A075B5Z7 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trav5-1A0A075B5Z7 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC15.47■□□□□ 0.07
Trav5-1A0A075B5Z7 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trav5-1A0A075B5Z7 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trav5-1A0A075B5Z7 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC15.47■□□□□ 0.07
Trav5-1A0A075B5Z7 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Trav5-1A0A075B5Z7 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC15.47■□□□□ 0.07
Trav5-1A0A075B5Z7 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trav5-1A0A075B5Z7 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trav5-1A0A075B5Z7 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trav5-1A0A075B5Z7 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC15.47■□□□□ 0.07
Trav5-1A0A075B5Z7 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trav5-1A0A075B5Z7 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC15.47■□□□□ 0.07
Trav5-1A0A075B5Z7 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Trav5-1A0A075B5Z7 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trav5-1A0A075B5Z7 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trav5-1A0A075B5Z7 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.07
Trav5-1A0A075B5Z7 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trav5-1A0A075B5Z7 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trav5-1A0A075B5Z7 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Trav5-1A0A075B5Z7 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.07
Trav5-1A0A075B5Z7 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC15.46■□□□□ 0.07
Trav5-1A0A075B5Z7 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC15.46■□□□□ 0.07
Trav5-1A0A075B5Z7 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trav5-1A0A075B5Z7 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trav5-1A0A075B5Z7 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trav5-1A0A075B5Z7 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trav5-1A0A075B5Z7 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC15.46■□□□□ 0.06
Trav5-1A0A075B5Z7 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.06
Trav5-1A0A075B5Z7 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC15.46■□□□□ 0.06
Trav5-1A0A075B5Z7 Gm45560-201ENSMUST00000211492 1472 ntBASIC15.46■□□□□ 0.06
Trav5-1A0A075B5Z7 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC15.45■□□□□ 0.06
Trav5-1A0A075B5Z7 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Trav5-1A0A075B5Z7 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trav5-1A0A075B5Z7 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trav5-1A0A075B5Z7 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trav5-1A0A075B5Z7 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trav5-1A0A075B5Z7 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trav5-1A0A075B5Z7 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trav5-1A0A075B5Z7 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trav5-1A0A075B5Z7 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trav5-1A0A075B5Z7 Gm18025-201ENSMUST00000221733 862 ntBASIC15.45■□□□□ 0.06
Trav5-1A0A075B5Z7 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trav5-1A0A075B5Z7 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trav5-1A0A075B5Z7 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trav5-1A0A075B5Z7 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trav5-1A0A075B5Z7 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trav5-1A0A075B5Z7 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trav5-1A0A075B5Z7 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
Trav5-1A0A075B5Z7 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trav5-1A0A075B5Z7 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC15.45■□□□□ 0.06
Trav5-1A0A075B5Z7 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trav5-1A0A075B5Z7 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trav5-1A0A075B5Z7 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trav5-1A0A075B5Z7 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Trav5-1A0A075B5Z7 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Trav5-1A0A075B5Z7 Tgds-204ENSMUST00000228543 1594 ntBASIC15.45■□□□□ 0.06
Trav5-1A0A075B5Z7 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC15.45■□□□□ 0.06
Trav5-1A0A075B5Z7 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC15.45■□□□□ 0.06
Trav5-1A0A075B5Z7 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trav5-1A0A075B5Z7 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trav5-1A0A075B5Z7 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC15.44■□□□□ 0.06
Trav5-1A0A075B5Z7 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC15.44■□□□□ 0.06
Trav5-1A0A075B5Z7 Gm10418-201ENSMUST00000100943 576 ntBASIC15.44■□□□□ 0.06
Trav5-1A0A075B5Z7 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Trav5-1A0A075B5Z7 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Trav5-1A0A075B5Z7 Gm13181-201ENSMUST00000120117 1069 ntBASIC15.44■□□□□ 0.06
Trav5-1A0A075B5Z7 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trav5-1A0A075B5Z7 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trav5-1A0A075B5Z7 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trav5-1A0A075B5Z7 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trav5-1A0A075B5Z7 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trav5-1A0A075B5Z7 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC15.43■□□□□ 0.06
Trav5-1A0A075B5Z7 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Trav5-1A0A075B5Z7 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Trav5-1A0A075B5Z7 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trav5-1A0A075B5Z7 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trav5-1A0A075B5Z7 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Trav5-1A0A075B5Z7 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC15.43■□□□□ 0.06
Trav5-1A0A075B5Z7 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Trav5-1A0A075B5Z7 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC15.43■□□□□ 0.06
Trav5-1A0A075B5Z7 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trav5-1A0A075B5Z7 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trav5-1A0A075B5Z7 Gm29241-201ENSMUST00000189260 1096 ntBASIC15.43■□□□□ 0.06
Retrieved 100 of 76,532 protein–RNA pairs in 40.1 ms