Protein–RNA interactions for Protein: A0A075B5Z4

Trav1, T cell receptor alpha variable 1 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav1A0A075B5Z4 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trav1A0A075B5Z4 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Trav1A0A075B5Z4 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Trav1A0A075B5Z4 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Trav1A0A075B5Z4 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Trav1A0A075B5Z4 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC16.72■□□□□ 0.27
Trav1A0A075B5Z4 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
Trav1A0A075B5Z4 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trav1A0A075B5Z4 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trav1A0A075B5Z4 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
Trav1A0A075B5Z4 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trav1A0A075B5Z4 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trav1A0A075B5Z4 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trav1A0A075B5Z4 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Trav1A0A075B5Z4 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trav1A0A075B5Z4 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trav1A0A075B5Z4 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
Trav1A0A075B5Z4 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trav1A0A075B5Z4 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trav1A0A075B5Z4 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trav1A0A075B5Z4 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trav1A0A075B5Z4 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trav1A0A075B5Z4 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC16.71■□□□□ 0.27
Trav1A0A075B5Z4 Gm42569-201ENSMUST00000200539 472 ntBASIC16.71■□□□□ 0.27
Trav1A0A075B5Z4 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
Trav1A0A075B5Z4 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trav1A0A075B5Z4 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
Trav1A0A075B5Z4 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trav1A0A075B5Z4 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC16.71■□□□□ 0.27
Trav1A0A075B5Z4 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC16.71■□□□□ 0.27
Trav1A0A075B5Z4 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trav1A0A075B5Z4 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trav1A0A075B5Z4 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trav1A0A075B5Z4 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trav1A0A075B5Z4 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
Trav1A0A075B5Z4 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trav1A0A075B5Z4 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
Trav1A0A075B5Z4 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trav1A0A075B5Z4 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Trav1A0A075B5Z4 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC16.7■□□□□ 0.26
Trav1A0A075B5Z4 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC16.7■□□□□ 0.26
Trav1A0A075B5Z4 Gm8495-201ENSMUST00000188740 694 ntBASIC16.7■□□□□ 0.26
Trav1A0A075B5Z4 Gm38285-201ENSMUST00000192928 922 ntBASIC16.7■□□□□ 0.26
Trav1A0A075B5Z4 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Trav1A0A075B5Z4 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trav1A0A075B5Z4 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC16.7■□□□□ 0.26
Trav1A0A075B5Z4 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trav1A0A075B5Z4 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trav1A0A075B5Z4 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trav1A0A075B5Z4 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Trav1A0A075B5Z4 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trav1A0A075B5Z4 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trav1A0A075B5Z4 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trav1A0A075B5Z4 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trav1A0A075B5Z4 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
Trav1A0A075B5Z4 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Trav1A0A075B5Z4 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
Trav1A0A075B5Z4 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
Trav1A0A075B5Z4 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trav1A0A075B5Z4 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trav1A0A075B5Z4 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trav1A0A075B5Z4 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trav1A0A075B5Z4 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trav1A0A075B5Z4 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trav1A0A075B5Z4 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trav1A0A075B5Z4 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trav1A0A075B5Z4 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trav1A0A075B5Z4 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trav1A0A075B5Z4 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Trav1A0A075B5Z4 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trav1A0A075B5Z4 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
Trav1A0A075B5Z4 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
Trav1A0A075B5Z4 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trav1A0A075B5Z4 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC16.68■□□□□ 0.26
Trav1A0A075B5Z4 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trav1A0A075B5Z4 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC16.68■□□□□ 0.26
Trav1A0A075B5Z4 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
Trav1A0A075B5Z4 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
Trav1A0A075B5Z4 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trav1A0A075B5Z4 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trav1A0A075B5Z4 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trav1A0A075B5Z4 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
Trav1A0A075B5Z4 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trav1A0A075B5Z4 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trav1A0A075B5Z4 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trav1A0A075B5Z4 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trav1A0A075B5Z4 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
Trav1A0A075B5Z4 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trav1A0A075B5Z4 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC16.67■□□□□ 0.26
Trav1A0A075B5Z4 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
Trav1A0A075B5Z4 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trav1A0A075B5Z4 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC16.67■□□□□ 0.26
Trav1A0A075B5Z4 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Trav1A0A075B5Z4 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trav1A0A075B5Z4 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
Trav1A0A075B5Z4 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trav1A0A075B5Z4 Gm2399-201ENSMUST00000104944 225 ntBASIC16.67■□□□□ 0.26
Trav1A0A075B5Z4 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
Trav1A0A075B5Z4 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC16.67■□□□□ 0.26
Trav1A0A075B5Z4 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 27.5 ms