Protein–RNA interactions for Protein: S4R1M3

H2afb2, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb2S4R1M3 Clca1-201ENSMUST00000029919 3655 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.45
H2afb2S4R1M3 Olfr610-203ENSMUST00000217627 1643 ntAPPRIS P1 TSL 5 BASIC5.96□□□□□ -1.45
H2afb2S4R1M3 Gm37078-201ENSMUST00000193314 2009 ntBASIC5.96□□□□□ -1.45
H2afb2S4R1M3 Scp2-ps2-203ENSMUST00000216438 1370 ntBASIC5.96□□□□□ -1.45
H2afb2S4R1M3 Gm5868-201ENSMUST00000031124 1382 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.45
H2afb2S4R1M3 Gm8126-201ENSMUST00000169587 1764 ntAPPRIS P1 TSL 2 BASIC5.96□□□□□ -1.46
H2afb2S4R1M3 Slco6b1-202ENSMUST00000178359 1778 ntBASIC5.96□□□□□ -1.46
H2afb2S4R1M3 Spata22-201ENSMUST00000117445 3200 ntAPPRIS P1 TSL 2 BASIC5.96□□□□□ -1.46
H2afb2S4R1M3 Vmn1r45-204ENSMUST00000227426 3205 ntAPPRIS P1 BASIC5.96□□□□□ -1.46
H2afb2S4R1M3 Gm5415-201ENSMUST00000171322 3609 ntAPPRIS P1 BASIC5.96□□□□□ -1.46
H2afb2S4R1M3 Pcdh9-208ENSMUST00000195826 6521 ntAPPRIS P3 TSL 5 BASIC5.96□□□□□ -1.46
H2afb2S4R1M3 Gm45426-201ENSMUST00000209393 3672 ntBASIC5.96□□□□□ -1.46
H2afb2S4R1M3 Map7d3-201ENSMUST00000114766 2891 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
H2afb2S4R1M3 Gm5797-201ENSMUST00000100886 997 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
H2afb2S4R1M3 Ighv1-26-201ENSMUST00000103510 351 ntAPPRIS P1 BASIC5.96□□□□□ -1.46
H2afb2S4R1M3 Gm3149-201ENSMUST00000112779 997 ntAPPRIS ALT2 TSL 5 BASIC5.96□□□□□ -1.46
H2afb2S4R1M3 Gm15332-201ENSMUST00000118386 357 ntBASIC5.96□□□□□ -1.46
H2afb2S4R1M3 Gm11879-201ENSMUST00000121885 702 ntBASIC5.96□□□□□ -1.46
H2afb2S4R1M3 Scgb2b23-ps-201ENSMUST00000122094 330 ntBASIC5.96□□□□□ -1.46
H2afb2S4R1M3 Gm15237-201ENSMUST00000122104 469 ntBASIC5.96□□□□□ -1.46
H2afb2S4R1M3 Gm12152-201ENSMUST00000122465 684 ntBASIC5.96□□□□□ -1.46
H2afb2S4R1M3 AI847159-203ENSMUST00000141786 915 ntTSL 2 BASIC5.96□□□□□ -1.46
H2afb2S4R1M3 Gm15471-201ENSMUST00000145893 625 ntTSL 2 BASIC5.96□□□□□ -1.46
H2afb2S4R1M3 Olfr92-201ENSMUST00000168659 939 ntAPPRIS P1 BASIC5.96□□□□□ -1.46
H2afb2S4R1M3 Gm22701-201ENSMUST00000175371 291 ntBASIC5.96□□□□□ -1.46
H2afb2S4R1M3 Gm24369-201ENSMUST00000175387 96 ntBASIC5.96□□□□□ -1.46
H2afb2S4R1M3 Gm20778-201ENSMUST00000178524 627 ntBASIC5.96□□□□□ -1.46
H2afb2S4R1M3 Prp2-202ENSMUST00000178961 951 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
H2afb2S4R1M3 Gm498-203ENSMUST00000179036 990 ntTSL 5 BASIC5.96□□□□□ -1.46
H2afb2S4R1M3 1700010L04Rik-203ENSMUST00000179662 1015 ntTSL 5 BASIC5.96□□□□□ -1.46
H2afb2S4R1M3 Gm27193-201ENSMUST00000184217 586 ntBASIC5.96□□□□□ -1.46
H2afb2S4R1M3 Gm28286-201ENSMUST00000188704 586 ntTSL 2 BASIC5.96□□□□□ -1.46
H2afb2S4R1M3 Gm5244-202ENSMUST00000189517 743 ntBASIC5.96□□□□□ -1.46
H2afb2S4R1M3 A430093F15Rik-206ENSMUST00000189565 651 ntTSL 3 BASIC5.96□□□□□ -1.46
H2afb2S4R1M3 Gm28086-201ENSMUST00000191586 317 ntTSL 5 BASIC5.96□□□□□ -1.46
H2afb2S4R1M3 Fabp9-202ENSMUST00000191678 647 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
H2afb2S4R1M3 Gm29736-201ENSMUST00000198189 385 ntBASIC5.96□□□□□ -1.46
H2afb2S4R1M3 Gm44382-201ENSMUST00000198683 122 ntBASIC5.96□□□□□ -1.46
H2afb2S4R1M3 Gm42109-202ENSMUST00000200893 664 ntTSL 3 BASIC5.96□□□□□ -1.46
H2afb2S4R1M3 2200002A13Rik-201ENSMUST00000206633 709 ntBASIC5.96□□□□□ -1.46
H2afb2S4R1M3 Gm45724-201ENSMUST00000213031 420 ntBASIC5.96□□□□□ -1.46
H2afb2S4R1M3 AC155941.3-201ENSMUST00000218476 308 ntBASIC5.96□□□□□ -1.46
H2afb2S4R1M3 4930529N20Rik-201ENSMUST00000220538 639 ntTSL 3 BASIC5.96□□□□□ -1.46
H2afb2S4R1M3 CT009754.4-201ENSMUST00000221430 565 ntBASIC5.96□□□□□ -1.46
H2afb2S4R1M3 AL669819.1-201ENSMUST00000225143 330 ntBASIC5.96□□□□□ -1.46
H2afb2S4R1M3 AC166105.1-201ENSMUST00000227512 482 ntBASIC5.96□□□□□ -1.46
H2afb2S4R1M3 Zfp993-201ENSMUST00000070932 387 ntAPPRIS ALT2 TSL 3 BASIC5.96□□□□□ -1.46
H2afb2S4R1M3 Olfr376-201ENSMUST00000078952 1210 ntAPPRIS ALT2 TSL 2 BASIC5.96□□□□□ -1.46
H2afb2S4R1M3 Olfr1307-202ENSMUST00000099606 939 ntAPPRIS P1 BASIC5.96□□□□□ -1.46
H2afb2S4R1M3 Olfr1039-201ENSMUST00000099910 960 ntAPPRIS P1 BASIC5.96□□□□□ -1.46
H2afb2S4R1M3 Gm43328-201ENSMUST00000198544 1434 ntBASIC5.96□□□□□ -1.46
H2afb2S4R1M3 Tspan7-202ENSMUST00000115526 7067 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
H2afb2S4R1M3 Gm2381-201ENSMUST00000174558 4073 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
H2afb2S4R1M3 Sspn-202ENSMUST00000111701 4512 ntTSL 3 BASIC5.95□□□□□ -1.46
H2afb2S4R1M3 Slc39a12-201ENSMUST00000082290 2675 ntAPPRIS P2 TSL 1 (best) BASIC5.95□□□□□ -1.46
H2afb2S4R1M3 Olfr916-202ENSMUST00000213714 1380 ntAPPRIS P1 TSL 5 BASIC5.95□□□□□ -1.46
H2afb2S4R1M3 Olfr90-205ENSMUST00000216488 3188 ntAPPRIS P1 TSL 5 BASIC5.95□□□□□ -1.46
H2afb2S4R1M3 AC120375.1-201ENSMUST00000227034 3612 ntBASIC5.95□□□□□ -1.46
H2afb2S4R1M3 Gm11624-201ENSMUST00000118579 1041 ntBASIC5.95□□□□□ -1.46
H2afb2S4R1M3 Gm6744-201ENSMUST00000119303 543 ntBASIC5.95□□□□□ -1.46
H2afb2S4R1M3 Gm14375-201ENSMUST00000119490 855 ntBASIC5.95□□□□□ -1.46
H2afb2S4R1M3 Gm22223-201ENSMUST00000157360 125 ntBASIC5.95□□□□□ -1.46
H2afb2S4R1M3 n-R5s209-201ENSMUST00000179494 119 ntBASIC5.95□□□□□ -1.46
H2afb2S4R1M3 Mir6992-201ENSMUST00000183342 109 ntBASIC5.95□□□□□ -1.46
H2afb2S4R1M3 Gm27998-201ENSMUST00000184902 361 ntBASIC5.95□□□□□ -1.46
H2afb2S4R1M3 Gm28586-201ENSMUST00000189857 456 ntBASIC5.95□□□□□ -1.46
H2afb2S4R1M3 Oaz3-201ENSMUST00000191506 732 ntAPPRIS P2 TSL 5 BASIC5.95□□□□□ -1.46
H2afb2S4R1M3 Gm35013-201ENSMUST00000197218 832 ntBASIC5.95□□□□□ -1.46
H2afb2S4R1M3 Gm43467-201ENSMUST00000197441 437 ntBASIC5.95□□□□□ -1.46
H2afb2S4R1M3 Trav3n-2-201ENSMUST00000197693 334 ntBASIC5.95□□□□□ -1.46
H2afb2S4R1M3 Trav3d-2-201ENSMUST00000199874 334 ntBASIC5.95□□□□□ -1.46
H2afb2S4R1M3 Gm43688-201ENSMUST00000202249 310 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
H2afb2S4R1M3 Gm44053-201ENSMUST00000203364 929 ntBASIC5.95□□□□□ -1.46
H2afb2S4R1M3 4930518I17Rik-201ENSMUST00000203902 656 ntBASIC5.95□□□□□ -1.46
H2afb2S4R1M3 Gm45070-201ENSMUST00000208100 246 ntBASIC5.95□□□□□ -1.46
H2afb2S4R1M3 Gm44955-201ENSMUST00000208843 229 ntTSL 5 BASIC5.95□□□□□ -1.46
H2afb2S4R1M3 Gm9685-201ENSMUST00000211275 538 ntBASIC5.95□□□□□ -1.46
H2afb2S4R1M3 Olfr1359-203ENSMUST00000214435 4425 ntAPPRIS P1 TSL 2 BASIC5.95□□□□□ -1.46
H2afb2S4R1M3 AC153821.1-201ENSMUST00000217893 581 ntTSL 2 BASIC5.95□□□□□ -1.46
H2afb2S4R1M3 Gm40787-201ENSMUST00000218056 317 ntTSL 3 BASIC5.95□□□□□ -1.46
H2afb2S4R1M3 AC104906.1-201ENSMUST00000218122 913 ntBASIC5.95□□□□□ -1.46
H2afb2S4R1M3 Gm32172-201ENSMUST00000220029 633 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
H2afb2S4R1M3 AC163621.3-201ENSMUST00000221738 1033 ntTSL 5 BASIC5.95□□□□□ -1.46
H2afb2S4R1M3 AC154612.1-202ENSMUST00000224806 1725 ntBASIC5.95□□□□□ -1.46
H2afb2S4R1M3 AC157572.1-201ENSMUST00000227187 825 ntBASIC5.95□□□□□ -1.46
H2afb2S4R1M3 Gm8256-203ENSMUST00000228692 591 ntBASIC5.95□□□□□ -1.46
H2afb2S4R1M3 Sbpl-201ENSMUST00000024939 870 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
H2afb2S4R1M3 Morn2-201ENSMUST00000061703 644 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
H2afb2S4R1M3 Ccdc54-201ENSMUST00000062439 1296 ntAPPRIS P1 BASIC5.95□□□□□ -1.46
H2afb2S4R1M3 Fam183b-202ENSMUST00000094156 567 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
H2afb2S4R1M3 Mttp-202ENSMUST00000098580 3072 ntTSL 5 BASIC5.95□□□□□ -1.46
H2afb2S4R1M3 Gm43900-201ENSMUST00000204868 2669 ntBASIC5.95□□□□□ -1.46
H2afb2S4R1M3 Olfr121-202ENSMUST00000174675 1494 ntAPPRIS P1 TSL 5 BASIC5.95□□□□□ -1.46
H2afb2S4R1M3 F830112A20Rik-201ENSMUST00000194249 3552 ntBASIC5.95□□□□□ -1.46
H2afb2S4R1M3 Gm42756-201ENSMUST00000196601 2614 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
H2afb2S4R1M3 Gm13101-201ENSMUST00000105763 1678 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
H2afb2S4R1M3 Vmn1r220-205ENSMUST00000228239 7849 ntAPPRIS P1 BASIC5.94□□□□□ -1.46
H2afb2S4R1M3 Gm29666-201ENSMUST00000189185 8038 ntAPPRIS P1 TSL 5 BASIC5.94□□□□□ -1.46
H2afb2S4R1M3 Gm38062-201ENSMUST00000192541 1856 ntBASIC5.94□□□□□ -1.46
H2afb2S4R1M3 Gm4070-201ENSMUST00000106766 8795 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
Retrieved 100 of 76,532 protein–RNA pairs in 76 ms