Protein–RNA interactions for Protein: Q9ESN2

Trim39, E3 ubiquitin-protein ligase TRIM39, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39Q9ESN2 Agtr1b-202ENSMUST00000163776 1633 ntAPPRIS P1 TSL 5 BASIC6.9□□□□□ -1.31
Trim39Q9ESN2 Olfr1166-201ENSMUST00000099833 1628 ntAPPRIS P1 BASIC6.9□□□□□ -1.31
Trim39Q9ESN2 Gm20547-202ENSMUST00000146299 3893 ntAPPRIS P1 TSL 5 BASIC6.9□□□□□ -1.31
Trim39Q9ESN2 Zscan4b-201ENSMUST00000168158 1754 ntAPPRIS P1 TSL 5 BASIC6.9□□□□□ -1.31
Trim39Q9ESN2 Cul4b-202ENSMUST00000050083 3090 ntAPPRIS P2 TSL 1 (best) BASIC6.9□□□□□ -1.31
Trim39Q9ESN2 A730017C20Rik-201ENSMUST00000058633 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC6.9□□□□□ -1.31
Trim39Q9ESN2 Il15ra-214ENSMUST00000138349 1936 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
Trim39Q9ESN2 Gm45634-201ENSMUST00000209736 1990 ntBASIC6.89□□□□□ -1.31
Trim39Q9ESN2 Gm42763-201ENSMUST00000199595 2087 ntBASIC6.89□□□□□ -1.31
Trim39Q9ESN2 Gja10-201ENSMUST00000056517 2117 ntAPPRIS P2 BASIC6.89□□□□□ -1.31
Trim39Q9ESN2 Gm44723-201ENSMUST00000207369 4000 ntBASIC6.89□□□□□ -1.31
Trim39Q9ESN2 Cyp4a14-201ENSMUST00000030487 2496 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
Trim39Q9ESN2 Mapk10-205ENSMUST00000128869 2518 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
Trim39Q9ESN2 Gm28651-202ENSMUST00000227968 2693 ntBASIC6.89□□□□□ -1.31
Trim39Q9ESN2 Armc2-203ENSMUST00000160262 4810 ntAPPRIS P1 TSL 5 BASIC6.89□□□□□ -1.31
Trim39Q9ESN2 AC163032.1-201ENSMUST00000220671 2970 ntBASIC6.89□□□□□ -1.31
Trim39Q9ESN2 Hydin-201ENSMUST00000043141 15783 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
Trim39Q9ESN2 Pard3-220ENSMUST00000162456 3204 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
Trim39Q9ESN2 9130023H24Rik-201ENSMUST00000078816 3574 ntAPPRIS P1 BASIC6.89□□□□□ -1.31
Trim39Q9ESN2 Tmem236-201ENSMUST00000077517 3659 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
Trim39Q9ESN2 Gm10376-201ENSMUST00000100694 555 ntAPPRIS ALT2 TSL 5 BASIC6.89□□□□□ -1.31
Trim39Q9ESN2 Gm22591-201ENSMUST00000104243 106 ntBASIC6.89□□□□□ -1.31
Trim39Q9ESN2 Tsacc-201ENSMUST00000010682 481 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
Trim39Q9ESN2 Cisd3-202ENSMUST00000107584 546 ntAPPRIS ALT2 TSL 1 (best) BASIC6.89□□□□□ -1.31
Trim39Q9ESN2 1700060C20Rik-201ENSMUST00000109506 605 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
Trim39Q9ESN2 Gm24628-201ENSMUST00000122761 289 ntBASIC6.89□□□□□ -1.31
Trim39Q9ESN2 1810062O18Rik-204ENSMUST00000141265 751 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
Trim39Q9ESN2 Gm23754-201ENSMUST00000157576 63 ntBASIC6.89□□□□□ -1.31
Trim39Q9ESN2 Gm23591-201ENSMUST00000157663 286 ntBASIC6.89□□□□□ -1.31
Trim39Q9ESN2 Gm22668-201ENSMUST00000158716 260 ntBASIC6.89□□□□□ -1.31
Trim39Q9ESN2 Gm7420-201ENSMUST00000162836 842 ntBASIC6.89□□□□□ -1.31
Trim39Q9ESN2 Gm6337-202ENSMUST00000170613 997 ntAPPRIS ALT2 TSL 5 BASIC6.89□□□□□ -1.31
Trim39Q9ESN2 Gm26197-201ENSMUST00000175033 115 ntBASIC6.89□□□□□ -1.31
Trim39Q9ESN2 Pid1-203ENSMUST00000175996 892 ntTSL 3 BASIC6.89□□□□□ -1.31
Trim39Q9ESN2 Rps19-ps5-201ENSMUST00000180745 403 ntBASIC6.89□□□□□ -1.31
Trim39Q9ESN2 Gm21312-202ENSMUST00000180889 1246 ntAPPRIS ALT2 TSL 2 BASIC6.89□□□□□ -1.31
Trim39Q9ESN2 Gm21304-202ENSMUST00000181059 1246 ntAPPRIS P1 TSL 2 BASIC6.89□□□□□ -1.31
Trim39Q9ESN2 Gm8764-202ENSMUST00000181179 1246 ntAPPRIS P1 TSL 2 BASIC6.89□□□□□ -1.31
Trim39Q9ESN2 Gm6763-202ENSMUST00000181287 1246 ntAPPRIS P1 TSL 2 BASIC6.89□□□□□ -1.31
Trim39Q9ESN2 Gm21293-203ENSMUST00000181634 1246 ntAPPRIS P1 TSL 2 BASIC6.89□□□□□ -1.31
Trim39Q9ESN2 Gm20765-202ENSMUST00000181703 1246 ntAPPRIS ALT2 TSL 2 BASIC6.89□□□□□ -1.31
Trim39Q9ESN2 Gm8183-201ENSMUST00000183134 980 ntBASIC6.89□□□□□ -1.31
Trim39Q9ESN2 Gm37972-201ENSMUST00000193497 379 ntTSL 5 BASIC6.89□□□□□ -1.31
Trim39Q9ESN2 Gm19057-201ENSMUST00000194329 1197 ntBASIC6.89□□□□□ -1.31
Trim39Q9ESN2 Gm42945-202ENSMUST00000197523 537 ntTSL 2 BASIC6.89□□□□□ -1.31
Trim39Q9ESN2 Gm23604-202ENSMUST00000198428 137 ntBASIC6.89□□□□□ -1.31
Trim39Q9ESN2 Gm17660-203ENSMUST00000198485 522 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
Trim39Q9ESN2 Gm40319-201ENSMUST00000199785 481 ntBASIC6.89□□□□□ -1.31
Trim39Q9ESN2 Gm42109-202ENSMUST00000200893 664 ntTSL 3 BASIC6.89□□□□□ -1.31
Trim39Q9ESN2 Olfr795-ps1-201ENSMUST00000205245 763 ntBASIC6.89□□□□□ -1.31
Trim39Q9ESN2 Gm39075-201ENSMUST00000206031 512 ntTSL 5 BASIC6.89□□□□□ -1.31
Trim39Q9ESN2 Gm8168-201ENSMUST00000209631 948 ntBASIC6.89□□□□□ -1.31
Trim39Q9ESN2 AC162376.1-201ENSMUST00000220120 435 ntBASIC6.89□□□□□ -1.31
Trim39Q9ESN2 AC163041.2-201ENSMUST00000223082 573 ntBASIC6.89□□□□□ -1.31
Trim39Q9ESN2 AC147245.1-201ENSMUST00000223294 677 ntBASIC6.89□□□□□ -1.31
Trim39Q9ESN2 AC192333.1-201ENSMUST00000224573 376 ntBASIC6.89□□□□□ -1.31
Trim39Q9ESN2 AC154390.1-201ENSMUST00000225629 277 ntBASIC6.89□□□□□ -1.31
Trim39Q9ESN2 Cd200r3-201ENSMUST00000048479 986 ntAPPRIS ALT2 TSL 1 (best) BASIC6.89□□□□□ -1.31
Trim39Q9ESN2 Gm14393-201ENSMUST00000072895 625 ntAPPRIS P1 TSL 2 BASIC6.89□□□□□ -1.31
Trim39Q9ESN2 Klra6-201ENSMUST00000074056 1116 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
Trim39Q9ESN2 Gm24268-201ENSMUST00000082990 110 ntBASIC6.89□□□□□ -1.31
Trim39Q9ESN2 Mir129-2-201ENSMUST00000083577 90 ntBASIC6.89□□□□□ -1.31
Trim39Q9ESN2 Gm16391-201ENSMUST00000086601 447 ntBASIC6.89□□□□□ -1.31
Trim39Q9ESN2 Gm10800-201ENSMUST00000099683 660 ntAPPRIS P1 TSL 5 BASIC6.89□□□□□ -1.31
Trim39Q9ESN2 Spag9-203ENSMUST00000075695 6910 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
Trim39Q9ESN2 Gm45872-201ENSMUST00000209804 1584 ntBASIC6.89□□□□□ -1.31
Trim39Q9ESN2 Gm13856-201ENSMUST00000126498 1742 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
Trim39Q9ESN2 4930509K18Rik-201ENSMUST00000144039 1810 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
Trim39Q9ESN2 Vmn1r30-204ENSMUST00000228577 1968 ntAPPRIS P1 BASIC6.89□□□□□ -1.31
Trim39Q9ESN2 Gm10693-201ENSMUST00000144146 2037 ntBASIC6.89□□□□□ -1.31
Trim39Q9ESN2 Olfr1360-203ENSMUST00000216083 2315 ntAPPRIS P1 TSL 5 BASIC6.89□□□□□ -1.31
Trim39Q9ESN2 Slco1a6-201ENSMUST00000111827 2815 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
Trim39Q9ESN2 C1s1-203ENSMUST00000160505 2946 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
Trim39Q9ESN2 Ppp3r2-201ENSMUST00000029991 3026 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
Trim39Q9ESN2 Atp1a4-201ENSMUST00000111243 3470 ntAPPRIS P1 TSL 5 BASIC6.89□□□□□ -1.31
Trim39Q9ESN2 Myo1h-205ENSMUST00000169347 3545 ntAPPRIS ALT2 TSL 5 BASIC6.89□□□□□ -1.31
Trim39Q9ESN2 Gm42885-201ENSMUST00000200763 4214 ntBASIC6.89□□□□□ -1.31
Trim39Q9ESN2 Vmn1r79-202ENSMUST00000226953 5636 ntAPPRIS P1 BASIC6.89□□□□□ -1.31
Trim39Q9ESN2 Olfr318-203ENSMUST00000214728 4552 ntAPPRIS P1 TSL 5 BASIC6.88□□□□□ -1.31
Trim39Q9ESN2 Tmem175-201ENSMUST00000063272 3956 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
Trim39Q9ESN2 Tdrd7-202ENSMUST00000107777 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC6.88□□□□□ -1.31
Trim39Q9ESN2 Mcm4-201ENSMUST00000023353 3589 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
Trim39Q9ESN2 Ccdc170-202ENSMUST00000138112 3350 ntAPPRIS ALT2 TSL 5 BASIC6.88□□□□□ -1.31
Trim39Q9ESN2 Phtf1-204ENSMUST00000117150 2921 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
Trim39Q9ESN2 Nlrp9a-203ENSMUST00000117252 2796 ntTSL 2 BASIC6.88□□□□□ -1.31
Trim39Q9ESN2 Mapk10-206ENSMUST00000133069 2732 ntTSL 2 BASIC6.88□□□□□ -1.31
Trim39Q9ESN2 Gm15681-201ENSMUST00000137501 2704 ntBASIC6.88□□□□□ -1.31
Trim39Q9ESN2 Dmtf1-207ENSMUST00000183973 2408 ntAPPRIS ALT1 TSL 5 BASIC6.88□□□□□ -1.31
Trim39Q9ESN2 Vmn1r22-206ENSMUST00000228905 2394 ntBASIC6.88□□□□□ -1.31
Trim39Q9ESN2 Gm45415-201ENSMUST00000209644 2074 ntBASIC6.88□□□□□ -1.31
Trim39Q9ESN2 Plxna4os2-201ENSMUST00000152538 2044 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
Trim39Q9ESN2 Pard3bos1-202ENSMUST00000138535 1878 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
Trim39Q9ESN2 Gm44117-201ENSMUST00000204442 1758 ntBASIC6.88□□□□□ -1.31
Trim39Q9ESN2 AC115891.1-201ENSMUST00000215798 1755 ntBASIC6.88□□□□□ -1.31
Trim39Q9ESN2 Gm13230-201ENSMUST00000120870 1575 ntBASIC6.88□□□□□ -1.31
Trim39Q9ESN2 Zfp825-203ENSMUST00000221173 1549 ntAPPRIS ALT2 TSL 3 BASIC6.88□□□□□ -1.31
Trim39Q9ESN2 Gm6502-201ENSMUST00000086050 1533 ntAPPRIS P1 TSL 5 BASIC6.88□□□□□ -1.31
Trim39Q9ESN2 Gm3510-201ENSMUST00000180447 1455 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
Trim39Q9ESN2 Foxp1-206ENSMUST00000113326 7029 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
Trim39Q9ESN2 Olfr1293-ps-201ENSMUST00000102551 888 ntAPPRIS ALT2 BASIC6.88□□□□□ -1.31
Retrieved 100 of 76,532 protein–RNA pairs in 90.6 ms