Protein–RNA interactions for Protein: Q9ES34

Ube3b, Ubiquitin-protein ligase E3B, mousemouse

Predictions only

Length 1,070 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube3bQ9ES34 CT573085.1-201ENSMUST00000224279 1197 ntBASIC8.56□□□□□ -1.04
Ube3bQ9ES34 CT030705.2-201ENSMUST00000225301 556 ntBASIC8.56□□□□□ -1.04
Ube3bQ9ES34 AC154380.1-201ENSMUST00000226804 720 ntBASIC8.56□□□□□ -1.04
Ube3bQ9ES34 AC135292.2-201ENSMUST00000227559 367 ntBASIC8.56□□□□□ -1.04
Ube3bQ9ES34 Gm6195-201ENSMUST00000063059 357 ntBASIC8.56□□□□□ -1.04
Ube3bQ9ES34 1700013H16Rik-201ENSMUST00000067940 1224 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
Ube3bQ9ES34 Olfr480-201ENSMUST00000071658 1029 ntBASIC8.56□□□□□ -1.04
Ube3bQ9ES34 Hamp2-201ENSMUST00000074671 420 ntAPPRIS ALT2 TSL 1 (best) BASIC8.56□□□□□ -1.04
Ube3bQ9ES34 Gm5528-201ENSMUST00000076314 480 ntBASIC8.56□□□□□ -1.04
Ube3bQ9ES34 Krtdap-201ENSMUST00000098559 470 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
Ube3bQ9ES34 Vps39-202ENSMUST00000102501 4384 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
Ube3bQ9ES34 G6pc2-202ENSMUST00000112317 1749 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
Ube3bQ9ES34 Gm3591-201ENSMUST00000164408 1745 ntAPPRIS P5 TSL 5 BASIC8.56□□□□□ -1.04
Ube3bQ9ES34 Fgfbp1-202ENSMUST00000199481 2191 ntAPPRIS P1 BASIC8.56□□□□□ -1.04
Ube3bQ9ES34 Mlh3-201ENSMUST00000019378 5463 ntAPPRIS P2 TSL 1 (best) BASIC8.56□□□□□ -1.04
Ube3bQ9ES34 Gm13102-203ENSMUST00000105761 2281 ntAPPRIS P2 TSL 2 BASIC8.56□□□□□ -1.04
Ube3bQ9ES34 Gm13102-202ENSMUST00000097800 2293 ntAPPRIS ALT2 TSL 5 BASIC8.56□□□□□ -1.04
Ube3bQ9ES34 AC113031.7-201ENSMUST00000228609 1928 ntBASIC8.56□□□□□ -1.04
Ube3bQ9ES34 Bdnf-203ENSMUST00000111043 3839 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
Ube3bQ9ES34 Vmn1r44-208ENSMUST00000227456 2031 ntAPPRIS P1 BASIC8.56□□□□□ -1.04
Ube3bQ9ES34 Plec-218ENSMUST00000169714 15001 ntAPPRIS ALT2 TSL 1 (best) BASIC8.56□□□□□ -1.04
Ube3bQ9ES34 Plec-201ENSMUST00000023226 15001 ntAPPRIS ALT2 TSL 1 (best) BASIC8.56□□□□□ -1.04
Ube3bQ9ES34 Gm10475-201ENSMUST00000084713 1796 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
Ube3bQ9ES34 Mbnl2-203ENSMUST00000226800 3328 ntBASIC8.55□□□□□ -1.04
Ube3bQ9ES34 Olfr480-202ENSMUST00000217653 1876 ntAPPRIS P1 TSL 3 BASIC8.55□□□□□ -1.04
Ube3bQ9ES34 Mtif2-201ENSMUST00000020749 2425 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
Ube3bQ9ES34 Gm32568-201ENSMUST00000212782 1421 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
Ube3bQ9ES34 Mecp2-205ENSMUST00000170481 10175 ntAPPRIS ALT2 TSL 5 BASIC8.55□□□□□ -1.04
Ube3bQ9ES34 Ldah-202ENSMUST00000169104 2626 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
Ube3bQ9ES34 5430427O19Rik-201ENSMUST00000113976 3754 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
Ube3bQ9ES34 AC122769.1-201ENSMUST00000226930 1714 ntBASIC8.55□□□□□ -1.04
Ube3bQ9ES34 Slc12a1-202ENSMUST00000110494 4740 ntAPPRIS ALT2 TSL 5 BASIC8.55□□□□□ -1.04
Ube3bQ9ES34 Olfr1426-201ENSMUST00000112952 2697 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
Ube3bQ9ES34 Ppp4r4-202ENSMUST00000187155 2675 ntAPPRIS ALT2 TSL 5 BASIC8.55□□□□□ -1.04
Ube3bQ9ES34 Zfp143-204ENSMUST00000209505 2693 ntAPPRIS P2 TSL 1 (best) BASIC8.55□□□□□ -1.04
Ube3bQ9ES34 BC053393-201ENSMUST00000050937 2020 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
Ube3bQ9ES34 Arhgap1-201ENSMUST00000090614 2866 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
Ube3bQ9ES34 Gm22781-201ENSMUST00000104083 137 ntBASIC8.55□□□□□ -1.04
Ube3bQ9ES34 Gm13103-202ENSMUST00000105768 994 ntAPPRIS ALT2 TSL 2 BASIC8.55□□□□□ -1.04
Ube3bQ9ES34 Tpmt-202ENSMUST00000110118 881 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
Ube3bQ9ES34 4930444P10Rik-201ENSMUST00000115367 868 ntAPPRIS ALT2 TSL 5 BASIC8.55□□□□□ -1.04
Ube3bQ9ES34 Vmn1r-ps127-201ENSMUST00000118007 478 ntBASIC8.55□□□□□ -1.04
Ube3bQ9ES34 Gm11913-201ENSMUST00000119094 336 ntBASIC8.55□□□□□ -1.04
Ube3bQ9ES34 Gm7916-201ENSMUST00000120325 456 ntBASIC8.55□□□□□ -1.04
Ube3bQ9ES34 Gm15316-201ENSMUST00000121082 421 ntBASIC8.55□□□□□ -1.04
Ube3bQ9ES34 Gm8577-201ENSMUST00000122420 986 ntBASIC8.55□□□□□ -1.04
Ube3bQ9ES34 Gm25178-201ENSMUST00000122633 325 ntBASIC8.55□□□□□ -1.04
Ube3bQ9ES34 Gm24680-201ENSMUST00000158759 126 ntBASIC8.55□□□□□ -1.04
Ube3bQ9ES34 Gm23025-201ENSMUST00000158769 111 ntBASIC8.55□□□□□ -1.04
Ube3bQ9ES34 Gm16138-201ENSMUST00000159341 821 ntBASIC8.55□□□□□ -1.04
Ube3bQ9ES34 Gm16577-201ENSMUST00000161579 471 ntTSL 3 BASIC8.55□□□□□ -1.04
Ube3bQ9ES34 Gm8374-201ENSMUST00000163826 672 ntAPPRIS P1 TSL 5 BASIC8.55□□□□□ -1.04
Ube3bQ9ES34 Serpina4-ps1-201ENSMUST00000166601 1287 ntBASIC8.55□□□□□ -1.04
Ube3bQ9ES34 Gm17212-201ENSMUST00000166666 259 ntBASIC8.55□□□□□ -1.04
Ube3bQ9ES34 Pde1c-207ENSMUST00000168944 2126 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
Ube3bQ9ES34 Gm6337-202ENSMUST00000170613 997 ntAPPRIS ALT2 TSL 5 BASIC8.55□□□□□ -1.04
Ube3bQ9ES34 Gm27036-201ENSMUST00000182465 980 ntBASIC8.55□□□□□ -1.04
Ube3bQ9ES34 Gm27007-201ENSMUST00000183264 279 ntTSL 3 BASIC8.55□□□□□ -1.04
Ube3bQ9ES34 Gm29490-201ENSMUST00000190923 342 ntBASIC8.55□□□□□ -1.04
Ube3bQ9ES34 1700020G17Rik-203ENSMUST00000191286 723 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
Ube3bQ9ES34 Gm37313-201ENSMUST00000191673 290 ntBASIC8.55□□□□□ -1.04
Ube3bQ9ES34 Gm33819-201ENSMUST00000194008 1221 ntTSL 3 BASIC8.55□□□□□ -1.04
Ube3bQ9ES34 4921527H02Rik-202ENSMUST00000196005 947 ntBASIC8.55□□□□□ -1.04
Ube3bQ9ES34 Gm44409-201ENSMUST00000198810 166 ntBASIC8.55□□□□□ -1.04
Ube3bQ9ES34 Gm44003-201ENSMUST00000203024 490 ntBASIC8.55□□□□□ -1.04
Ube3bQ9ES34 Gm43979-201ENSMUST00000203179 475 ntBASIC8.55□□□□□ -1.04
Ube3bQ9ES34 4930443G03Rik-201ENSMUST00000203475 1282 ntBASIC8.55□□□□□ -1.04
Ube3bQ9ES34 Gm9367-201ENSMUST00000205703 546 ntBASIC8.55□□□□□ -1.04
Ube3bQ9ES34 Gm6828-201ENSMUST00000207902 1186 ntBASIC8.55□□□□□ -1.04
Ube3bQ9ES34 Lncbate1-201ENSMUST00000211953 812 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
Ube3bQ9ES34 Tgm4-206ENSMUST00000215247 951 ntTSL 2 BASIC8.55□□□□□ -1.04
Ube3bQ9ES34 Gm5023-201ENSMUST00000217442 587 ntBASIC8.55□□□□□ -1.04
Ube3bQ9ES34 AC131677.1-201ENSMUST00000218721 535 ntBASIC8.55□□□□□ -1.04
Ube3bQ9ES34 Mrpl42-203ENSMUST00000218893 661 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
Ube3bQ9ES34 AC158803.2-201ENSMUST00000219452 679 ntBASIC8.55□□□□□ -1.04
Ube3bQ9ES34 Gm39473-201ENSMUST00000223498 522 ntTSL 3 BASIC8.55□□□□□ -1.04
Ube3bQ9ES34 CT009713.9-201ENSMUST00000223604 389 ntBASIC8.55□□□□□ -1.04
Ube3bQ9ES34 AC115304.1-202ENSMUST00000226850 837 ntBASIC8.55□□□□□ -1.04
Ube3bQ9ES34 Rps27rt-201ENSMUST00000053150 374 ntAPPRIS P1 BASIC8.55□□□□□ -1.04
Ube3bQ9ES34 Ear6-201ENSMUST00000074477 713 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
Ube3bQ9ES34 Tnfrsf22-202ENSMUST00000084396 564 ntAPPRIS P3 TSL 2 BASIC8.55□□□□□ -1.04
Ube3bQ9ES34 Olfr653-201ENSMUST00000098174 1046 ntAPPRIS P1 BASIC8.55□□□□□ -1.04
Ube3bQ9ES34 Ugt1a6b-201ENSMUST00000113137 2249 ntAPPRIS P1 TSL 3 BASIC8.55□□□□□ -1.04
Ube3bQ9ES34 Emcn-201ENSMUST00000119475 1357 ntAPPRIS P3 TSL 1 (best) BASIC8.55□□□□□ -1.04
Ube3bQ9ES34 Gm11853-201ENSMUST00000119687 1384 ntBASIC8.55□□□□□ -1.04
Ube3bQ9ES34 AC171003.1-201ENSMUST00000221667 1665 ntBASIC8.55□□□□□ -1.04
Ube3bQ9ES34 Tbx20-201ENSMUST00000052946 9091 ntAPPRIS P3 TSL 1 (best) BASIC8.55□□□□□ -1.04
Ube3bQ9ES34 Stard9-201ENSMUST00000070420 4874 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
Ube3bQ9ES34 Slfn10-ps-202ENSMUST00000152760 2673 ntBASIC8.55□□□□□ -1.04
Ube3bQ9ES34 Spag9-201ENSMUST00000024979 6756 ntTSL 5 BASIC8.55□□□□□ -1.04
Ube3bQ9ES34 Gm20749-201ENSMUST00000186319 3492 ntBASIC8.55□□□□□ -1.04
Ube3bQ9ES34 Polk-204ENSMUST00000221645 1644 ntAPPRIS ALT2 TSL 1 (best) BASIC8.54□□□□□ -1.04
Ube3bQ9ES34 4930548H24Rik-201ENSMUST00000031020 1641 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
Ube3bQ9ES34 Gm5141-201ENSMUST00000167516 1743 ntTSL 5 BASIC8.54□□□□□ -1.04
Ube3bQ9ES34 Gm37181-201ENSMUST00000192513 1727 ntBASIC8.54□□□□□ -1.04
Ube3bQ9ES34 Slfn9-201ENSMUST00000038211 5769 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
Ube3bQ9ES34 Fam13a-201ENSMUST00000089860 5786 ntAPPRIS P2 TSL 1 (best) BASIC8.54□□□□□ -1.04
Ube3bQ9ES34 Pus3-202ENSMUST00000121246 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC8.54□□□□□ -1.04
Ube3bQ9ES34 Carf-209ENSMUST00000187978 5463 ntAPPRIS P3 TSL 1 (best) BASIC8.54□□□□□ -1.04
Ube3bQ9ES34 Irak3-205ENSMUST00000145665 2869 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
Retrieved 100 of 76,532 protein–RNA pairs in 101.9 ms