Protein–RNA interactions for Protein: Q9DC48

Cdc40, Pre-mRNA-processing factor 17, mousemouse

Known RBP Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdc40Q9DC48 Scgb1b4-ps-201ENSMUST00000186920 271 ntBASIC5.69□□□□□ -1.5
Cdc40Q9DC48 Gm5244-202ENSMUST00000189517 743 ntBASIC5.69□□□□□ -1.5
Cdc40Q9DC48 1700025B11Rik-201ENSMUST00000190233 553 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
Cdc40Q9DC48 Gm38133-201ENSMUST00000195109 815 ntTSL 5 BASIC5.69□□□□□ -1.5
Cdc40Q9DC48 Ighv5-3-201ENSMUST00000195336 322 ntBASIC5.69□□□□□ -1.5
Cdc40Q9DC48 Gm7626-201ENSMUST00000195801 353 ntBASIC5.69□□□□□ -1.5
Cdc40Q9DC48 Gm4332-201ENSMUST00000196114 346 ntBASIC5.69□□□□□ -1.5
Cdc40Q9DC48 Gm43392-201ENSMUST00000196560 434 ntBASIC5.69□□□□□ -1.5
Cdc40Q9DC48 Gm42916-201ENSMUST00000197142 1042 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
Cdc40Q9DC48 Gm17824-201ENSMUST00000197690 805 ntBASIC5.69□□□□□ -1.5
Cdc40Q9DC48 Gm43561-201ENSMUST00000199866 448 ntBASIC5.69□□□□□ -1.5
Cdc40Q9DC48 E330011O21Rik-208ENSMUST00000211650 1225 ntTSL 5 BASIC5.69□□□□□ -1.5
Cdc40Q9DC48 AC165256.1-201ENSMUST00000216687 670 ntTSL 2 BASIC5.69□□□□□ -1.5
Cdc40Q9DC48 A330049N07Rik-202ENSMUST00000219920 587 ntTSL 5 BASIC5.69□□□□□ -1.5
Cdc40Q9DC48 AC134439.2-201ENSMUST00000221950 467 ntBASIC5.69□□□□□ -1.5
Cdc40Q9DC48 Gm33312-201ENSMUST00000222443 332 ntBASIC5.69□□□□□ -1.5
Cdc40Q9DC48 AC105407.1-201ENSMUST00000225684 614 ntBASIC5.69□□□□□ -1.5
Cdc40Q9DC48 Olfr796-201ENSMUST00000037071 933 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
Cdc40Q9DC48 Rps26-ps1-201ENSMUST00000077208 449 ntBASIC5.69□□□□□ -1.5
Cdc40Q9DC48 Gml-201ENSMUST00000096400 957 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
Cdc40Q9DC48 Rfx4-202ENSMUST00000060397 3534 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
Cdc40Q9DC48 Zzz3-201ENSMUST00000089982 4197 ntAPPRIS ALT2 TSL 1 (best) BASIC5.69□□□□□ -1.5
Cdc40Q9DC48 Gm5427-201ENSMUST00000217680 2591 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
Cdc40Q9DC48 AC151530.1-203ENSMUST00000223343 2591 ntTSL 5 BASIC5.69□□□□□ -1.5
Cdc40Q9DC48 Trmt10a-201ENSMUST00000040321 4025 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
Cdc40Q9DC48 Fat1-205ENSMUST00000191428 14814 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
Cdc40Q9DC48 Gm26606-201ENSMUST00000181292 2439 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
Cdc40Q9DC48 AC116950.1-201ENSMUST00000226322 3250 ntBASIC5.69□□□□□ -1.5
Cdc40Q9DC48 Poln-206ENSMUST00000202638 2814 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
Cdc40Q9DC48 Enpp2-204ENSMUST00000173516 2887 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
Cdc40Q9DC48 Gm37456-201ENSMUST00000193176 5837 ntBASIC5.68□□□□□ -1.5
Cdc40Q9DC48 Gm42507-201ENSMUST00000201187 2555 ntBASIC5.68□□□□□ -1.5
Cdc40Q9DC48 Ifi204-201ENSMUST00000111214 2296 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
Cdc40Q9DC48 Prcp-201ENSMUST00000076052 2967 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
Cdc40Q9DC48 Nr3c1-204ENSMUST00000115571 6327 ntAPPRIS P2 TSL 1 (best) BASIC5.68□□□□□ -1.5
Cdc40Q9DC48 Zfp933-201ENSMUST00000105718 4238 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
Cdc40Q9DC48 Hmmr-201ENSMUST00000020579 3892 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
Cdc40Q9DC48 Vmn1r208-202ENSMUST00000227136 3156 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
Cdc40Q9DC48 Akap11-202ENSMUST00000123853 9364 ntAPPRIS P3 TSL 5 BASIC5.68□□□□□ -1.5
Cdc40Q9DC48 Gm37735-201ENSMUST00000193995 1406 ntBASIC5.68□□□□□ -1.5
Cdc40Q9DC48 Mat2a-206ENSMUST00000206692 1400 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
Cdc40Q9DC48 Gm5949-201ENSMUST00000213468 1421 ntBASIC5.68□□□□□ -1.5
Cdc40Q9DC48 Tdo2-204ENSMUST00000193879 1616 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
Cdc40Q9DC48 Mecom-212ENSMUST00000173495 5066 ntAPPRIS P5 TSL 5 BASIC5.68□□□□□ -1.5
Cdc40Q9DC48 Gm23739-201ENSMUST00000102295 108 ntBASIC5.68□□□□□ -1.5
Cdc40Q9DC48 Trav6-6-201ENSMUST00000103584 344 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
Cdc40Q9DC48 Trav6n-5-201ENSMUST00000103611 338 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
Cdc40Q9DC48 Gm13193-201ENSMUST00000117275 225 ntBASIC5.68□□□□□ -1.5
Cdc40Q9DC48 Gm11624-201ENSMUST00000118579 1041 ntBASIC5.68□□□□□ -1.5
Cdc40Q9DC48 Gm12099-201ENSMUST00000118660 750 ntBASIC5.68□□□□□ -1.5
Cdc40Q9DC48 Gm13338-201ENSMUST00000120235 361 ntBASIC5.68□□□□□ -1.5
Cdc40Q9DC48 Gm15187-201ENSMUST00000122329 264 ntBASIC5.68□□□□□ -1.5
Cdc40Q9DC48 Gm23757-201ENSMUST00000158353 100 ntBASIC5.68□□□□□ -1.5
Cdc40Q9DC48 Gm21560-202ENSMUST00000177670 618 ntAPPRIS ALT2 TSL 5 BASIC5.68□□□□□ -1.5
Cdc40Q9DC48 Gm3269-202ENSMUST00000178137 618 ntAPPRIS ALT2 TSL 5 BASIC5.68□□□□□ -1.5
Cdc40Q9DC48 Gm3099-202ENSMUST00000178274 618 ntAPPRIS ALT2 TSL 5 BASIC5.68□□□□□ -1.5
Cdc40Q9DC48 Trav6d-7-201ENSMUST00000178650 358 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
Cdc40Q9DC48 Gm5947-201ENSMUST00000179156 714 ntBASIC5.68□□□□□ -1.5
Cdc40Q9DC48 Gm3642-202ENSMUST00000179296 618 ntAPPRIS ALT2 TSL 5 BASIC5.68□□□□□ -1.5
Cdc40Q9DC48 Gm5645-201ENSMUST00000179597 714 ntBASIC5.68□□□□□ -1.5
Cdc40Q9DC48 Trav6n-7-201ENSMUST00000179607 358 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
Cdc40Q9DC48 Gm3594-203ENSMUST00000179747 618 ntAPPRIS ALT2 TSL 5 BASIC5.68□□□□□ -1.5
Cdc40Q9DC48 4930590L14Rik-201ENSMUST00000196030 836 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
Cdc40Q9DC48 Trav6d-6-201ENSMUST00000197754 344 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
Cdc40Q9DC48 Gm44075-201ENSMUST00000204208 216 ntBASIC5.68□□□□□ -1.5
Cdc40Q9DC48 Gm18839-201ENSMUST00000204292 670 ntBASIC5.68□□□□□ -1.5
Cdc40Q9DC48 Gm45054-201ENSMUST00000206525 342 ntTSL 2 BASIC5.68□□□□□ -1.5
Cdc40Q9DC48 6720469O03Rik-201ENSMUST00000206785 1201 ntBASIC5.68□□□□□ -1.5
Cdc40Q9DC48 Olfr1295-201ENSMUST00000207283 1282 ntAPPRIS P1 TSL 2 BASIC5.68□□□□□ -1.5
Cdc40Q9DC48 Gm18863-201ENSMUST00000217004 1299 ntBASIC5.68□□□□□ -1.5
Cdc40Q9DC48 AC153943.1-201ENSMUST00000219312 256 ntBASIC5.68□□□□□ -1.5
Cdc40Q9DC48 AV026068-216ENSMUST00000223874 328 ntBASIC5.68□□□□□ -1.5
Cdc40Q9DC48 Tpbpb-203ENSMUST00000223978 991 ntAPPRIS ALT2 BASIC5.68□□□□□ -1.5
Cdc40Q9DC48 Gm5612-201ENSMUST00000053326 375 ntBASIC5.68□□□□□ -1.5
Cdc40Q9DC48 Olfr826-201ENSMUST00000078322 942 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
Cdc40Q9DC48 Gm22126-201ENSMUST00000083244 142 ntBASIC5.68□□□□□ -1.5
Cdc40Q9DC48 n-R5-8s1-201ENSMUST00000083988 148 ntBASIC5.68□□□□□ -1.5
Cdc40Q9DC48 Gm10799-201ENSMUST00000099666 312 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
Cdc40Q9DC48 4921524L21Rik-201ENSMUST00000044829 1480 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
Cdc40Q9DC48 Eps15-207ENSMUST00000175776 2802 ntAPPRIS ALT2 TSL 5 BASIC5.68□□□□□ -1.5
Cdc40Q9DC48 Tceal1-201ENSMUST00000055104 2803 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
Cdc40Q9DC48 4930404I05Rik-201ENSMUST00000125902 2675 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
Cdc40Q9DC48 Ccr9-203ENSMUST00000166236 5197 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
Cdc40Q9DC48 Trpm3-204ENSMUST00000099564 3653 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
Cdc40Q9DC48 Gm42503-201ENSMUST00000199080 3706 ntBASIC5.68□□□□□ -1.5
Cdc40Q9DC48 Gm30122-202ENSMUST00000218662 1556 ntTSL 5 BASIC5.67□□□□□ -1.5
Cdc40Q9DC48 Gm3476-202ENSMUST00000167913 1759 ntAPPRIS P5 TSL 5 BASIC5.67□□□□□ -1.5
Cdc40Q9DC48 Gm3149-202ENSMUST00000171810 1759 ntAPPRIS P5 TSL 5 BASIC5.67□□□□□ -1.5
Cdc40Q9DC48 AC164107.1-202ENSMUST00000228953 1816 ntBASIC5.67□□□□□ -1.5
Cdc40Q9DC48 Vmn1r31-203ENSMUST00000177318 2076 ntAPPRIS P2 TSL 2 BASIC5.67□□□□□ -1.5
Cdc40Q9DC48 Vmn1r12-203ENSMUST00000227581 6490 ntAPPRIS ALT2 BASIC5.67□□□□□ -1.5
Cdc40Q9DC48 Dlx6os1-201ENSMUST00000159568 4608 ntTSL 5 BASIC5.67□□□□□ -1.5
Cdc40Q9DC48 Pirt-201ENSMUST00000123434 4200 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
Cdc40Q9DC48 Gm25564-201ENSMUST00000104604 132 ntBASIC5.67□□□□□ -1.5
Cdc40Q9DC48 Sec61g-202ENSMUST00000109642 691 ntAPPRIS P1 TSL 2 BASIC5.67□□□□□ -1.5
Cdc40Q9DC48 Olfr1004-ps1-201ENSMUST00000120361 580 ntBASIC5.67□□□□□ -1.5
Cdc40Q9DC48 Gm12583-201ENSMUST00000120677 853 ntBASIC5.67□□□□□ -1.5
Cdc40Q9DC48 Lrrc72-202ENSMUST00000122115 934 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
Cdc40Q9DC48 Tmem216-205ENSMUST00000145210 774 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
Cdc40Q9DC48 Gm22214-201ENSMUST00000157563 172 ntBASIC5.67□□□□□ -1.5
Retrieved 100 of 76,532 protein–RNA pairs in 56.7 ms