Protein–RNA interactions for Protein: Q9D0R4

Ddx56, Probable ATP-dependent RNA helicase DDX56, mousemouse

Known RBP Predictions only

Length 546 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx56Q9D0R4 AC158631.2-201ENSMUST00000219999 478 ntBASIC6.84□□□□□ -1.31
Ddx56Q9D0R4 AC116319.2-201ENSMUST00000228159 984 ntBASIC6.84□□□□□ -1.31
Ddx56Q9D0R4 Olfr1386-201ENSMUST00000071905 1128 ntAPPRIS P1 BASIC6.84□□□□□ -1.31
Ddx56Q9D0R4 Olfr1484-201ENSMUST00000074180 948 ntAPPRIS P1 BASIC6.84□□□□□ -1.31
Ddx56Q9D0R4 n-R5s36-201ENSMUST00000082998 119 ntBASIC6.84□□□□□ -1.31
Ddx56Q9D0R4 Gm26072-201ENSMUST00000083135 107 ntBASIC6.84□□□□□ -1.31
Ddx56Q9D0R4 Map2-203ENSMUST00000114012 5119 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
Ddx56Q9D0R4 Gm16794-203ENSMUST00000185324 1490 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
Ddx56Q9D0R4 AC153971.1-201ENSMUST00000215097 3811 ntBASIC6.84□□□□□ -1.31
Ddx56Q9D0R4 Vmn1r22-203ENSMUST00000228076 3011 ntAPPRIS P1 BASIC6.84□□□□□ -1.32
Ddx56Q9D0R4 Lrrc3b-202ENSMUST00000163937 1424 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.32
Ddx56Q9D0R4 Ctsr-201ENSMUST00000021889 1414 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.32
Ddx56Q9D0R4 Gm20559-202ENSMUST00000201831 2993 ntTSL 1 (best) BASIC6.84□□□□□ -1.32
Ddx56Q9D0R4 5031410I06Rik-201ENSMUST00000063524 2995 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.32
Ddx56Q9D0R4 Gm7347-201ENSMUST00000095004 2995 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.32
Ddx56Q9D0R4 4930404I05Rik-201ENSMUST00000125902 2675 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
Ddx56Q9D0R4 Agtpbp1-202ENSMUST00000109830 2879 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
Ddx56Q9D0R4 Gm42535-201ENSMUST00000197312 1399 ntBASIC6.83□□□□□ -1.32
Ddx56Q9D0R4 Gm43164-201ENSMUST00000202529 2128 ntBASIC6.83□□□□□ -1.32
Ddx56Q9D0R4 4933440M02Rik-201ENSMUST00000061823 3801 ntTSL 2 BASIC6.83□□□□□ -1.32
Ddx56Q9D0R4 Vmn2r96-201ENSMUST00000165692 2343 ntAPPRIS P1 TSL 5 BASIC6.83□□□□□ -1.32
Ddx56Q9D0R4 Stk3-205ENSMUST00000226555 2730 ntAPPRIS ALT2 BASIC6.83□□□□□ -1.32
Ddx56Q9D0R4 Gm40770-201ENSMUST00000220040 1502 ntTSL 5 BASIC6.83□□□□□ -1.32
Ddx56Q9D0R4 Rnu11-201ENSMUST00000104135 134 ntBASIC6.83□□□□□ -1.32
Ddx56Q9D0R4 Gm24790-201ENSMUST00000104285 132 ntBASIC6.83□□□□□ -1.32
Ddx56Q9D0R4 Gm12392-201ENSMUST00000118014 938 ntBASIC6.83□□□□□ -1.32
Ddx56Q9D0R4 Gm11987-201ENSMUST00000118524 381 ntBASIC6.83□□□□□ -1.32
Ddx56Q9D0R4 Olfr334-ps1-201ENSMUST00000121252 892 ntBASIC6.83□□□□□ -1.32
Ddx56Q9D0R4 Gm11446-201ENSMUST00000121319 866 ntBASIC6.83□□□□□ -1.32
Ddx56Q9D0R4 Eif4e1b-203ENSMUST00000126785 841 ntAPPRIS ALT2 TSL 3 BASIC6.83□□□□□ -1.32
Ddx56Q9D0R4 Gm14368-201ENSMUST00000145305 415 ntBASIC6.83□□□□□ -1.32
Ddx56Q9D0R4 Gm25550-201ENSMUST00000158079 128 ntBASIC6.83□□□□□ -1.32
Ddx56Q9D0R4 Gm21999-201ENSMUST00000165985 387 ntBASIC6.83□□□□□ -1.32
Ddx56Q9D0R4 Vmn1r-ps53-201ENSMUST00000173066 922 ntBASIC6.83□□□□□ -1.32
Ddx56Q9D0R4 Vmn1r173-201ENSMUST00000174055 942 ntAPPRIS P1 BASIC6.83□□□□□ -1.32
Ddx56Q9D0R4 Gm23968-201ENSMUST00000175047 125 ntBASIC6.83□□□□□ -1.32
Ddx56Q9D0R4 Rpl9-ps1-202ENSMUST00000182502 576 ntAPPRIS P1 BASIC6.83□□□□□ -1.32
Ddx56Q9D0R4 Gm19480-201ENSMUST00000185547 667 ntBASIC6.83□□□□□ -1.32
Ddx56Q9D0R4 Gm8641-201ENSMUST00000186995 826 ntBASIC6.83□□□□□ -1.32
Ddx56Q9D0R4 Stpg4-203ENSMUST00000187078 668 ntAPPRIS ALT2 TSL 3 BASIC6.83□□□□□ -1.32
Ddx56Q9D0R4 1700029M03Rik-202ENSMUST00000187517 357 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
Ddx56Q9D0R4 Scgb2b9-ps-201ENSMUST00000189522 334 ntBASIC6.83□□□□□ -1.32
Ddx56Q9D0R4 Gm2229-201ENSMUST00000193328 710 ntBASIC6.83□□□□□ -1.32
Ddx56Q9D0R4 Ube2l3-ps1-201ENSMUST00000199777 436 ntBASIC6.83□□□□□ -1.32
Ddx56Q9D0R4 Gm2762-205ENSMUST00000202366 356 ntTSL 3 BASIC6.83□□□□□ -1.32
Ddx56Q9D0R4 Gm21048-201ENSMUST00000202470 1166 ntBASIC6.83□□□□□ -1.32
Ddx56Q9D0R4 Gm30606-201ENSMUST00000212801 847 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
Ddx56Q9D0R4 Dynlrb2-202ENSMUST00000213007 527 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
Ddx56Q9D0R4 AL772397.1-201ENSMUST00000216707 606 ntBASIC6.83□□□□□ -1.32
Ddx56Q9D0R4 Gm19116-201ENSMUST00000218592 642 ntBASIC6.83□□□□□ -1.32
Ddx56Q9D0R4 AC164629.1-201ENSMUST00000220250 1113 ntBASIC6.83□□□□□ -1.32
Ddx56Q9D0R4 Gm5928-201ENSMUST00000221839 466 ntBASIC6.83□□□□□ -1.32
Ddx56Q9D0R4 AC116724.1-201ENSMUST00000227900 972 ntBASIC6.83□□□□□ -1.32
Ddx56Q9D0R4 Il20-201ENSMUST00000027673 1186 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
Ddx56Q9D0R4 Olfr1325-201ENSMUST00000054541 948 ntAPPRIS P2 BASIC6.83□□□□□ -1.32
Ddx56Q9D0R4 Gm9788-201ENSMUST00000057038 906 ntBASIC6.83□□□□□ -1.32
Ddx56Q9D0R4 Fpr2-201ENSMUST00000064068 1133 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
Ddx56Q9D0R4 Krtap14-201ENSMUST00000099562 216 ntTSL 5 BASIC6.83□□□□□ -1.32
Ddx56Q9D0R4 Trim16-203ENSMUST00000108703 3574 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
Ddx56Q9D0R4 Gm46348-201ENSMUST00000222917 2151 ntTSL 5 BASIC6.83□□□□□ -1.32
Ddx56Q9D0R4 Gm37255-201ENSMUST00000193302 3060 ntBASIC6.83□□□□□ -1.32
Ddx56Q9D0R4 Adam30-201ENSMUST00000050342 3510 ntAPPRIS P1 BASIC6.83□□□□□ -1.32
Ddx56Q9D0R4 Adgrf5-201ENSMUST00000113599 8535 ntAPPRIS P1 TSL 5 BASIC6.83□□□□□ -1.32
Ddx56Q9D0R4 Osbpl9-216ENSMUST00000161363 2356 ntTSL 5 BASIC6.83□□□□□ -1.32
Ddx56Q9D0R4 Zfp748-202ENSMUST00000181892 5293 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
Ddx56Q9D0R4 Cab39l-201ENSMUST00000022553 3037 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
Ddx56Q9D0R4 Vmn2r114-201ENSMUST00000168033 2571 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
Ddx56Q9D0R4 Sytl5-201ENSMUST00000067529 2301 ntAPPRIS P3 TSL 1 (best) BASIC6.83□□□□□ -1.32
Ddx56Q9D0R4 Vmn1r176-203ENSMUST00000226767 2536 ntAPPRIS P1 BASIC6.83□□□□□ -1.32
Ddx56Q9D0R4 Vmn1r176-205ENSMUST00000227661 2507 ntAPPRIS P1 BASIC6.83□□□□□ -1.32
Ddx56Q9D0R4 Vmn1r176-206ENSMUST00000228280 2532 ntAPPRIS P1 BASIC6.83□□□□□ -1.32
Ddx56Q9D0R4 AC141476.1-201ENSMUST00000224988 3387 ntBASIC6.83□□□□□ -1.32
Ddx56Q9D0R4 9930038B18Rik-201ENSMUST00000151816 3966 ntTSL 5 BASIC6.83□□□□□ -1.32
Ddx56Q9D0R4 Acsm2-207ENSMUST00000167935 6738 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
Ddx56Q9D0R4 Gm37789-201ENSMUST00000192862 2889 ntBASIC6.83□□□□□ -1.32
Ddx56Q9D0R4 Sgip1-203ENSMUST00000080728 3712 ntAPPRIS P3 TSL 1 (best) BASIC6.83□□□□□ -1.32
Ddx56Q9D0R4 Timm17a-201ENSMUST00000081104 7280 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
Ddx56Q9D0R4 Cpne3-201ENSMUST00000029885 5648 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
Ddx56Q9D0R4 Gm38276-201ENSMUST00000192446 1343 ntBASIC6.82□□□□□ -1.32
Ddx56Q9D0R4 Gm42989-201ENSMUST00000200646 2306 ntBASIC6.82□□□□□ -1.32
Ddx56Q9D0R4 Olfr1348-209ENSMUST00000213549 2714 ntAPPRIS P1 TSL 5 BASIC6.82□□□□□ -1.32
Ddx56Q9D0R4 Arhgap15-203ENSMUST00000112824 3118 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
Ddx56Q9D0R4 CT030181.1-201ENSMUST00000089534 3549 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
Ddx56Q9D0R4 Ppargc1a-203ENSMUST00000132734 6464 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
Ddx56Q9D0R4 Trp53bp1-201ENSMUST00000110647 9405 ntAPPRIS ALT2 TSL 1 (best) BASIC6.82□□□□□ -1.32
Ddx56Q9D0R4 Hsp90aa1-201ENSMUST00000021698 2852 ntAPPRIS P1 TSL 5 BASIC6.82□□□□□ -1.32
Ddx56Q9D0R4 AC160029.1-201ENSMUST00000219628 2678 ntBASIC6.82□□□□□ -1.32
Ddx56Q9D0R4 4921534A09Rik-201ENSMUST00000213976 2495 ntBASIC6.82□□□□□ -1.32
Ddx56Q9D0R4 Triml1-201ENSMUST00000059692 1850 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
Ddx56Q9D0R4 Pde1a-202ENSMUST00000102651 1673 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
Ddx56Q9D0R4 Pde1a-201ENSMUST00000090756 1661 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
Ddx56Q9D0R4 Olfr800-201ENSMUST00000104903 940 ntAPPRIS P1 BASIC6.82□□□□□ -1.32
Ddx56Q9D0R4 Gm15216-201ENSMUST00000118058 277 ntBASIC6.82□□□□□ -1.32
Ddx56Q9D0R4 Gm7746-201ENSMUST00000120966 503 ntBASIC6.82□□□□□ -1.32
Ddx56Q9D0R4 Gm14847-201ENSMUST00000121978 519 ntBASIC6.82□□□□□ -1.32
Ddx56Q9D0R4 Gm11787-201ENSMUST00000121996 1050 ntBASIC6.82□□□□□ -1.32
Ddx56Q9D0R4 Gm12175-201ENSMUST00000122081 345 ntBASIC6.82□□□□□ -1.32
Ddx56Q9D0R4 Gm12827-201ENSMUST00000132690 660 ntTSL 3 BASIC6.82□□□□□ -1.32
Ddx56Q9D0R4 Gm10130-201ENSMUST00000133235 303 ntAPPRIS P1 TSL 5 BASIC6.82□□□□□ -1.32
Ddx56Q9D0R4 Gm7613-201ENSMUST00000139070 487 ntBASIC6.82□□□□□ -1.32
Retrieved 100 of 76,532 protein–RNA pairs in 98.8 ms