Protein–RNA interactions for Protein: Q99PQ2

Trim11, E3 ubiquitin-protein ligase TRIM11, mousemouse

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim11Q99PQ2 Gm34047-201ENSMUST00000223547 606 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
Trim11Q99PQ2 3830408C21Rik-203ENSMUST00000224293 822 ntBASIC7.79□□□□□ -1.16
Trim11Q99PQ2 AC163631.1-201ENSMUST00000225041 598 ntBASIC7.79□□□□□ -1.16
Trim11Q99PQ2 AC165106.1-201ENSMUST00000227580 408 ntBASIC7.79□□□□□ -1.16
Trim11Q99PQ2 Gstm2-202ENSMUST00000066530 854 ntTSL 3 BASIC7.79□□□□□ -1.16
Trim11Q99PQ2 Tas2r129-201ENSMUST00000070991 965 ntAPPRIS P1 BASIC7.79□□□□□ -1.16
Trim11Q99PQ2 Gm24451-201ENSMUST00000083353 133 ntBASIC7.79□□□□□ -1.16
Trim11Q99PQ2 Olfr1220-201ENSMUST00000099789 1026 ntAPPRIS P1 BASIC7.79□□□□□ -1.16
Trim11Q99PQ2 Olfr1220-202ENSMUST00000099806 1201 ntAPPRIS P1 TSL 3 BASIC7.79□□□□□ -1.16
Trim11Q99PQ2 Trim43b-202ENSMUST00000189557 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC7.79□□□□□ -1.16
Trim11Q99PQ2 4930402F06Rik-202ENSMUST00000113010 1372 ntAPPRIS P3 TSL 1 (best) BASIC7.79□□□□□ -1.16
Trim11Q99PQ2 Olfr1106-202ENSMUST00000213781 2569 ntAPPRIS P1 TSL 5 BASIC7.79□□□□□ -1.16
Trim11Q99PQ2 Olfr1106-203ENSMUST00000217650 2573 ntAPPRIS P1 TSL 5 BASIC7.79□□□□□ -1.16
Trim11Q99PQ2 Gm28673-201ENSMUST00000186562 1498 ntTSL 5 BASIC7.79□□□□□ -1.16
Trim11Q99PQ2 Gm28687-201ENSMUST00000187203 1494 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
Trim11Q99PQ2 Gm29274-202ENSMUST00000188814 1498 ntTSL 5 BASIC7.79□□□□□ -1.16
Trim11Q99PQ2 Gm28074-201ENSMUST00000190424 1497 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
Trim11Q99PQ2 Gm29373-201ENSMUST00000190660 1494 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
Trim11Q99PQ2 Gm37344-203ENSMUST00000195490 1498 ntTSL 5 BASIC7.79□□□□□ -1.16
Trim11Q99PQ2 AC124680.1-201ENSMUST00000223923 1585 ntBASIC7.79□□□□□ -1.16
Trim11Q99PQ2 Ankrd17-205ENSMUST00000197021 8067 ntAPPRIS ALT2 TSL 5 BASIC7.79□□□□□ -1.16
Trim11Q99PQ2 Arhgap32-203ENSMUST00000174641 13568 ntAPPRIS P1 TSL 5 BASIC7.79□□□□□ -1.16
Trim11Q99PQ2 Gm43258-201ENSMUST00000200312 1950 ntBASIC7.79□□□□□ -1.16
Trim11Q99PQ2 Psg21-202ENSMUST00000182128 2066 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
Trim11Q99PQ2 Psg21-201ENSMUST00000094793 2074 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
Trim11Q99PQ2 Gm37410-201ENSMUST00000193623 3039 ntBASIC7.78□□□□□ -1.16
Trim11Q99PQ2 Gm44624-201ENSMUST00000208700 2278 ntBASIC7.78□□□□□ -1.16
Trim11Q99PQ2 Wnk1-218ENSMUST00000161512 1426 ntBASIC7.78□□□□□ -1.16
Trim11Q99PQ2 Zfp110-205ENSMUST00000168247 2499 ntAPPRIS P1 TSL 5 BASIC7.78□□□□□ -1.16
Trim11Q99PQ2 Osbpl9-214ENSMUST00000160774 2765 ntTSL 5 BASIC7.78□□□□□ -1.16
Trim11Q99PQ2 Tnfrsf22-201ENSMUST00000075588 4170 ntAPPRIS ALT2 TSL 1 (best) BASIC7.78□□□□□ -1.16
Trim11Q99PQ2 Olfr1278-203ENSMUST00000213727 6744 ntAPPRIS P1 TSL 5 BASIC7.78□□□□□ -1.16
Trim11Q99PQ2 Igkv1-122-201ENSMUST00000103314 383 ntAPPRIS P1 BASIC7.78□□□□□ -1.16
Trim11Q99PQ2 Ighv1-84-201ENSMUST00000103551 351 ntAPPRIS P1 BASIC7.78□□□□□ -1.16
Trim11Q99PQ2 Gm24473-201ENSMUST00000104483 131 ntBASIC7.78□□□□□ -1.16
Trim11Q99PQ2 Lage3-202ENSMUST00000114152 746 ntTSL 2 BASIC7.78□□□□□ -1.16
Trim11Q99PQ2 Fam107b-204ENSMUST00000115054 601 ntAPPRIS P1 TSL 3 BASIC7.78□□□□□ -1.16
Trim11Q99PQ2 Smim24-202ENSMUST00000118206 949 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
Trim11Q99PQ2 Gm13221-201ENSMUST00000121712 430 ntBASIC7.78□□□□□ -1.16
Trim11Q99PQ2 Gm16984-201ENSMUST00000130003 982 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
Trim11Q99PQ2 Gm13715-201ENSMUST00000136578 411 ntTSL 3 BASIC7.78□□□□□ -1.16
Trim11Q99PQ2 Crem-219ENSMUST00000140332 1015 ntTSL 5 BASIC7.78□□□□□ -1.16
Trim11Q99PQ2 Gm12204-201ENSMUST00000147412 333 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
Trim11Q99PQ2 Gm26167-201ENSMUST00000158423 253 ntBASIC7.78□□□□□ -1.16
Trim11Q99PQ2 Gm16006-201ENSMUST00000160938 566 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
Trim11Q99PQ2 Krtap11-1-201ENSMUST00000171542 1008 ntAPPRIS P1 BASIC7.78□□□□□ -1.16
Trim11Q99PQ2 Gm20625-201ENSMUST00000177065 698 ntTSL 3 BASIC7.78□□□□□ -1.16
Trim11Q99PQ2 Gm16430-202ENSMUST00000178145 703 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
Trim11Q99PQ2 Gm16405-202ENSMUST00000180150 703 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
Trim11Q99PQ2 Polr2k-202ENSMUST00000180159 489 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
Trim11Q99PQ2 Gm29470-201ENSMUST00000188007 696 ntBASIC7.78□□□□□ -1.16
Trim11Q99PQ2 Gm28117-201ENSMUST00000188472 371 ntBASIC7.78□□□□□ -1.16
Trim11Q99PQ2 1700019A02Rik-202ENSMUST00000190748 726 ntAPPRIS ALT2 TSL 3 BASIC7.78□□□□□ -1.16
Trim11Q99PQ2 Gm29138-201ENSMUST00000191444 348 ntBASIC7.78□□□□□ -1.16
Trim11Q99PQ2 Gm37947-201ENSMUST00000192740 894 ntTSL 5 BASIC7.78□□□□□ -1.16
Trim11Q99PQ2 Gm37716-201ENSMUST00000193553 947 ntBASIC7.78□□□□□ -1.16
Trim11Q99PQ2 4930590H14Rik-201ENSMUST00000193999 551 ntBASIC7.78□□□□□ -1.16
Trim11Q99PQ2 Gm38360-201ENSMUST00000195130 454 ntBASIC7.78□□□□□ -1.16
Trim11Q99PQ2 Gm37399-201ENSMUST00000195224 416 ntBASIC7.78□□□□□ -1.16
Trim11Q99PQ2 Gm19185-201ENSMUST00000196365 643 ntBASIC7.78□□□□□ -1.16
Trim11Q99PQ2 Gm43237-201ENSMUST00000196835 1044 ntBASIC7.78□□□□□ -1.16
Trim11Q99PQ2 Gm23011-202ENSMUST00000197855 275 ntBASIC7.78□□□□□ -1.16
Trim11Q99PQ2 Lnp1-201ENSMUST00000210579 671 ntAPPRIS P1 TSL 5 BASIC7.78□□□□□ -1.16
Trim11Q99PQ2 Gm34623-201ENSMUST00000210900 977 ntTSL 5 BASIC7.78□□□□□ -1.16
Trim11Q99PQ2 Olfr114-202ENSMUST00000214871 1256 ntAPPRIS P1 TSL 5 BASIC7.78□□□□□ -1.16
Trim11Q99PQ2 Gm4796-201ENSMUST00000219802 624 ntBASIC7.78□□□□□ -1.16
Trim11Q99PQ2 AC153821.2-201ENSMUST00000220253 468 ntTSL 5 BASIC7.78□□□□□ -1.16
Trim11Q99PQ2 AC153361.2-202ENSMUST00000220405 842 ntTSL 5 BASIC7.78□□□□□ -1.16
Trim11Q99PQ2 AC116502.1-201ENSMUST00000220989 291 ntBASIC7.78□□□□□ -1.16
Trim11Q99PQ2 AC159622.3-201ENSMUST00000221010 361 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
Trim11Q99PQ2 AC122486.1-201ENSMUST00000221562 196 ntTSL 2 BASIC7.78□□□□□ -1.16
Trim11Q99PQ2 AC159239.1-201ENSMUST00000221767 603 ntTSL 3 BASIC7.78□□□□□ -1.16
Trim11Q99PQ2 AC130823.2-201ENSMUST00000226169 290 ntBASIC7.78□□□□□ -1.16
Trim11Q99PQ2 Crem-202ENSMUST00000049942 953 ntTSL 2 BASIC7.78□□□□□ -1.16
Trim11Q99PQ2 Vmn1r40-201ENSMUST00000075158 933 ntAPPRIS P1 BASIC7.78□□□□□ -1.16
Trim11Q99PQ2 Olfr1051-201ENSMUST00000099898 927 ntAPPRIS P1 BASIC7.78□□□□□ -1.16
Trim11Q99PQ2 4930435E12Rik-201ENSMUST00000122078 1368 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
Trim11Q99PQ2 Lpin1-204ENSMUST00000221230 4114 ntAPPRIS ALT2 TSL 1 (best) BASIC7.78□□□□□ -1.16
Trim11Q99PQ2 A430110C17Rik-201ENSMUST00000195666 4348 ntBASIC7.78□□□□□ -1.16
Trim11Q99PQ2 Gm38189-201ENSMUST00000194495 1457 ntBASIC7.78□□□□□ -1.16
Trim11Q99PQ2 Gm15448-201ENSMUST00000094911 1557 ntTSL 5 BASIC7.78□□□□□ -1.16
Trim11Q99PQ2 Gm21051-201ENSMUST00000221757 1688 ntBASIC7.78□□□□□ -1.16
Trim11Q99PQ2 AC122346.1-201ENSMUST00000225266 3732 ntBASIC7.78□□□□□ -1.16
Trim11Q99PQ2 Adam28-202ENSMUST00000111072 3025 ntAPPRIS ALT2 TSL 1 (best) BASIC7.78□□□□□ -1.16
Trim11Q99PQ2 Zfp934-209ENSMUST00000222746 2206 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
Trim11Q99PQ2 Pde1c-208ENSMUST00000170774 2132 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
Trim11Q99PQ2 Cntrl-204ENSMUST00000113033 1817 ntTSL 5 BASIC7.78□□□□□ -1.16
Trim11Q99PQ2 Smarca2-242ENSMUST00000208751 1846 ntTSL 5 BASIC7.78□□□□□ -1.16
Trim11Q99PQ2 Erc2-208ENSMUST00000210924 4871 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
Trim11Q99PQ2 AC163354.1-201ENSMUST00000220620 1630 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
Trim11Q99PQ2 Zfp955b-201ENSMUST00000099414 1638 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
Trim11Q99PQ2 Zfp78-202ENSMUST00000108559 1539 ntAPPRIS P4 TSL 2 BASIC7.78□□□□□ -1.16
Trim11Q99PQ2 Rnase4-201ENSMUST00000022428 1518 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
Trim11Q99PQ2 Larp1b-201ENSMUST00000026862 1541 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
Trim11Q99PQ2 Gm43062-201ENSMUST00000196302 1319 ntBASIC7.78□□□□□ -1.16
Trim11Q99PQ2 Tbcel-202ENSMUST00000066179 3893 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
Trim11Q99PQ2 Otub2-205ENSMUST00000179684 2890 ntTSL 5 BASIC7.77□□□□□ -1.16
Trim11Q99PQ2 Zwint-202ENSMUST00000105431 2676 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.16
Trim11Q99PQ2 Adsl-201ENSMUST00000023043 3712 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
Trim11Q99PQ2 Itch-201ENSMUST00000029126 5159 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
Retrieved 100 of 76,532 protein–RNA pairs in 118.1 ms