Protein–RNA interactions for Protein: Q8VC85

Lsm1, U6 snRNA-associated Sm-like protein LSm1, mousemouse

Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm1Q8VC85 Rhbdd1-202ENSMUST00000140020 3687 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
Lsm1Q8VC85 Gm25877-201ENSMUST00000104326 129 ntBASIC5.82□□□□□ -1.48
Lsm1Q8VC85 S100a1-202ENSMUST00000107340 577 ntTSL 2 BASIC5.82□□□□□ -1.48
Lsm1Q8VC85 Gm14331-201ENSMUST00000120396 409 ntBASIC5.82□□□□□ -1.48
Lsm1Q8VC85 Gm12400-201ENSMUST00000120915 1003 ntBASIC5.82□□□□□ -1.48
Lsm1Q8VC85 Gm2986-201ENSMUST00000121603 382 ntBASIC5.82□□□□□ -1.48
Lsm1Q8VC85 Gm13837-201ENSMUST00000126326 337 ntTSL 3 BASIC5.82□□□□□ -1.48
Lsm1Q8VC85 Gtsf1-206ENSMUST00000146675 756 ntAPPRIS P1 TSL 5 BASIC5.82□□□□□ -1.48
Lsm1Q8VC85 Gm17078-201ENSMUST00000167617 668 ntAPPRIS P1 TSL 5 BASIC5.82□□□□□ -1.48
Lsm1Q8VC85 Gm18953-201ENSMUST00000175694 300 ntBASIC5.82□□□□□ -1.48
Lsm1Q8VC85 Rps16-ps3-201ENSMUST00000179126 441 ntBASIC5.82□□□□□ -1.48
Lsm1Q8VC85 Gm5947-201ENSMUST00000179156 714 ntBASIC5.82□□□□□ -1.48
Lsm1Q8VC85 Gm5645-201ENSMUST00000179597 714 ntBASIC5.82□□□□□ -1.48
Lsm1Q8VC85 Gm26653-201ENSMUST00000181537 1214 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
Lsm1Q8VC85 Gm27252-201ENSMUST00000183782 689 ntTSL 5 BASIC5.82□□□□□ -1.48
Lsm1Q8VC85 C78334-201ENSMUST00000186632 600 ntTSL 3 BASIC5.82□□□□□ -1.48
Lsm1Q8VC85 Scgb1b17-201ENSMUST00000187081 417 ntAPPRIS P1 TSL 5 BASIC5.82□□□□□ -1.48
Lsm1Q8VC85 Scgb1b10-201ENSMUST00000187257 417 ntAPPRIS P1 TSL 5 BASIC5.82□□□□□ -1.48
Lsm1Q8VC85 Scgb1b15-201ENSMUST00000189118 417 ntAPPRIS P1 TSL 5 BASIC5.82□□□□□ -1.48
Lsm1Q8VC85 Nanog-ps2-201ENSMUST00000190988 529 ntBASIC5.82□□□□□ -1.48
Lsm1Q8VC85 Gm7804-202ENSMUST00000194187 854 ntBASIC5.82□□□□□ -1.48
Lsm1Q8VC85 Gm33050-201ENSMUST00000198132 501 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
Lsm1Q8VC85 Gm45579-201ENSMUST00000209367 887 ntTSL 5 BASIC5.82□□□□□ -1.48
Lsm1Q8VC85 Gm18940-201ENSMUST00000222518 871 ntBASIC5.82□□□□□ -1.48
Lsm1Q8VC85 AC114008.1-201ENSMUST00000226193 937 ntBASIC5.82□□□□□ -1.48
Lsm1Q8VC85 AC135292.2-201ENSMUST00000227559 367 ntBASIC5.82□□□□□ -1.48
Lsm1Q8VC85 4930555F03Rik-201ENSMUST00000033963 717 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
Lsm1Q8VC85 1700102P08Rik-201ENSMUST00000035234 1101 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
Lsm1Q8VC85 Olfr177-201ENSMUST00000072853 930 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
Lsm1Q8VC85 Olfr826-201ENSMUST00000078322 942 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
Lsm1Q8VC85 Mir3068-201ENSMUST00000083004 136 ntBASIC5.82□□□□□ -1.48
Lsm1Q8VC85 Olfr16-202ENSMUST00000215254 2690 ntAPPRIS P1 TSL 5 BASIC5.82□□□□□ -1.48
Lsm1Q8VC85 Gm37677-201ENSMUST00000194520 7634 ntBASIC5.82□□□□□ -1.48
Lsm1Q8VC85 AC154755.2-201ENSMUST00000224384 2857 ntBASIC5.82□□□□□ -1.48
Lsm1Q8VC85 Vmn2r42-201ENSMUST00000086282 3623 ntAPPRIS P2 TSL 1 (best) BASIC5.82□□□□□ -1.48
Lsm1Q8VC85 Gm38118-201ENSMUST00000192052 2222 ntBASIC5.82□□□□□ -1.48
Lsm1Q8VC85 Gm44102-201ENSMUST00000204031 1666 ntBASIC5.82□□□□□ -1.48
Lsm1Q8VC85 Vmn1r4-204ENSMUST00000227073 1695 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
Lsm1Q8VC85 Copg2-201ENSMUST00000048774 3961 ntAPPRIS P2 TSL 1 (best) BASIC5.82□□□□□ -1.48
Lsm1Q8VC85 Mug1-201ENSMUST00000032228 4657 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
Lsm1Q8VC85 Gm38277-201ENSMUST00000195172 1367 ntBASIC5.81□□□□□ -1.48
Lsm1Q8VC85 Gm42685-201ENSMUST00000200378 2390 ntBASIC5.81□□□□□ -1.48
Lsm1Q8VC85 Ugt1a7c-202ENSMUST00000113135 3302 ntAPPRIS ALT2 TSL 1 (best) BASIC5.81□□□□□ -1.48
Lsm1Q8VC85 Mapk10-212ENSMUST00000170792 7203 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
Lsm1Q8VC85 Gm37775-201ENSMUST00000194120 2313 ntBASIC5.81□□□□□ -1.48
Lsm1Q8VC85 Rnf145-202ENSMUST00000101327 4214 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
Lsm1Q8VC85 Qser1-201ENSMUST00000117237 8973 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
Lsm1Q8VC85 AC155634.1-201ENSMUST00000221687 2706 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
Lsm1Q8VC85 Ppip5k2-205ENSMUST00000171129 3425 ntAPPRIS ALT2 TSL 1 (best) BASIC5.81□□□□□ -1.48
Lsm1Q8VC85 Gm43887-201ENSMUST00000204727 3186 ntBASIC5.81□□□□□ -1.48
Lsm1Q8VC85 Gm42676-201ENSMUST00000197609 2686 ntBASIC5.81□□□□□ -1.48
Lsm1Q8VC85 Igkv4-90-201ENSMUST00000103334 352 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
Lsm1Q8VC85 Gm15181-201ENSMUST00000120142 177 ntBASIC5.81□□□□□ -1.48
Lsm1Q8VC85 Gm13493-201ENSMUST00000120318 493 ntBASIC5.81□□□□□ -1.48
Lsm1Q8VC85 Vmn1r-ps111-201ENSMUST00000121014 997 ntBASIC5.81□□□□□ -1.48
Lsm1Q8VC85 D830026I12Rik-201ENSMUST00000124434 935 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
Lsm1Q8VC85 Vmn1r208-201ENSMUST00000124841 927 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
Lsm1Q8VC85 3100003L05Rik-201ENSMUST00000130240 664 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
Lsm1Q8VC85 Fam229b-205ENSMUST00000135785 674 ntAPPRIS P1 TSL 3 BASIC5.81□□□□□ -1.48
Lsm1Q8VC85 4933401B06Rik-201ENSMUST00000139758 1155 ntBASIC5.81□□□□□ -1.48
Lsm1Q8VC85 Gm13373-201ENSMUST00000144634 655 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
Lsm1Q8VC85 1700129C05Rik-202ENSMUST00000159858 784 ntAPPRIS ALT2 TSL 5 BASIC5.81□□□□□ -1.48
Lsm1Q8VC85 Gm4202-201ENSMUST00000169025 733 ntBASIC5.81□□□□□ -1.48
Lsm1Q8VC85 Obox6-ps1-201ENSMUST00000176658 1042 ntBASIC5.81□□□□□ -1.48
Lsm1Q8VC85 1700010L04Rik-203ENSMUST00000179662 1015 ntTSL 5 BASIC5.81□□□□□ -1.48
Lsm1Q8VC85 Gm18700-201ENSMUST00000185791 553 ntBASIC5.81□□□□□ -1.48
Lsm1Q8VC85 4933404I11Rik-201ENSMUST00000190294 1202 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
Lsm1Q8VC85 Gm19124-201ENSMUST00000191041 832 ntBASIC5.81□□□□□ -1.48
Lsm1Q8VC85 Gm4856-201ENSMUST00000192696 1091 ntBASIC5.81□□□□□ -1.48
Lsm1Q8VC85 Gm37784-201ENSMUST00000193233 189 ntBASIC5.81□□□□□ -1.48
Lsm1Q8VC85 Gm37126-201ENSMUST00000195289 883 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
Lsm1Q8VC85 Gm37358-201ENSMUST00000195492 479 ntBASIC5.81□□□□□ -1.48
Lsm1Q8VC85 Gm43126-201ENSMUST00000201546 429 ntTSL 3 BASIC5.81□□□□□ -1.48
Lsm1Q8VC85 Gm43850-201ENSMUST00000202021 578 ntBASIC5.81□□□□□ -1.48
Lsm1Q8VC85 BC049739-201ENSMUST00000202626 660 ntBASIC5.81□□□□□ -1.48
Lsm1Q8VC85 Gm4602-201ENSMUST00000203198 308 ntBASIC5.81□□□□□ -1.48
Lsm1Q8VC85 Gm5886-202ENSMUST00000203957 522 ntBASIC5.81□□□□□ -1.48
Lsm1Q8VC85 Olfr374-201ENSMUST00000209675 1053 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
Lsm1Q8VC85 Gm45486-201ENSMUST00000211767 1109 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
Lsm1Q8VC85 AC166352.1-201ENSMUST00000215483 1105 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
Lsm1Q8VC85 Nqo2-201ENSMUST00000021843 1063 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
Lsm1Q8VC85 Gm33489-201ENSMUST00000223171 673 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
Lsm1Q8VC85 CT030238.4-202ENSMUST00000226143 745 ntBASIC5.81□□□□□ -1.48
Lsm1Q8VC85 AC167013.4-201ENSMUST00000226712 317 ntBASIC5.81□□□□□ -1.48
Lsm1Q8VC85 Ms4a4b-201ENSMUST00000035258 1244 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
Lsm1Q8VC85 Platr26-201ENSMUST00000079720 641 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
Lsm1Q8VC85 Gm43169-201ENSMUST00000199544 4734 ntBASIC5.81□□□□□ -1.48
Lsm1Q8VC85 Gm6145-206ENSMUST00000211251 2850 ntTSL 5 BASIC5.81□□□□□ -1.48
Lsm1Q8VC85 Fat4-201ENSMUST00000061260 16109 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
Lsm1Q8VC85 Zfy2-202ENSMUST00000187148 2846 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
Lsm1Q8VC85 Tnfaip3-202ENSMUST00000105527 4334 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
Lsm1Q8VC85 Gm44026-201ENSMUST00000203985 2088 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
Lsm1Q8VC85 Gm42781-201ENSMUST00000201317 2719 ntBASIC5.81□□□□□ -1.48
Lsm1Q8VC85 Kcnma1-209ENSMUST00000179097 4596 ntTSL 5 BASIC5.81□□□□□ -1.48
Lsm1Q8VC85 Gm1966-201ENSMUST00000184540 7293 ntBASIC5.8□□□□□ -1.48
Lsm1Q8VC85 Stx19-201ENSMUST00000055557 2812 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Lsm1Q8VC85 Vmn1r45-204ENSMUST00000227426 3205 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
Lsm1Q8VC85 Olfr1336-202ENSMUST00000214301 6882 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
Lsm1Q8VC85 AC154682.1-201ENSMUST00000225871 3124 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
Lsm1Q8VC85 Zfp994-201ENSMUST00000179996 4880 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
Retrieved 100 of 76,532 protein–RNA pairs in 87.6 ms