Protein–RNA interactions for Protein: Q8VC31

Ccdc9, Coiled-coil domain-containing protein 9, mousemouse

Known RBP Predictions only

Length 543 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc9Q8VC31 Vmn1r-ps51-201ENSMUST00000175667 320 ntBASIC7.3□□□□□ -1.24
Ccdc9Q8VC31 Gm5039-201ENSMUST00000177747 435 ntAPPRIS P1 BASIC7.3□□□□□ -1.24
Ccdc9Q8VC31 Gm8332-201ENSMUST00000179468 435 ntAPPRIS P1 BASIC7.3□□□□□ -1.24
Ccdc9Q8VC31 Gm2035-201ENSMUST00000180053 435 ntAPPRIS P1 BASIC7.3□□□□□ -1.24
Ccdc9Q8VC31 Gm26901-201ENSMUST00000181554 1193 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
Ccdc9Q8VC31 Gm4832-202ENSMUST00000183295 375 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
Ccdc9Q8VC31 Gm37950-201ENSMUST00000191616 364 ntTSL 3 BASIC7.3□□□□□ -1.24
Ccdc9Q8VC31 Gm2367-201ENSMUST00000192374 472 ntBASIC7.3□□□□□ -1.24
Ccdc9Q8VC31 2610012C04Rik-201ENSMUST00000193434 1023 ntBASIC7.3□□□□□ -1.24
Ccdc9Q8VC31 Gm43906-201ENSMUST00000203194 906 ntBASIC7.3□□□□□ -1.24
Ccdc9Q8VC31 Gm44707-201ENSMUST00000206293 1216 ntTSL 5 BASIC7.3□□□□□ -1.24
Ccdc9Q8VC31 Gm35520-201ENSMUST00000209235 784 ntTSL 5 BASIC7.3□□□□□ -1.24
Ccdc9Q8VC31 6430710M23Rik-201ENSMUST00000210843 1191 ntBASIC7.3□□□□□ -1.24
Ccdc9Q8VC31 E130101E03Rik-201ENSMUST00000214469 1163 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
Ccdc9Q8VC31 Gm18226-201ENSMUST00000215261 521 ntBASIC7.3□□□□□ -1.24
Ccdc9Q8VC31 Gm17917-201ENSMUST00000218561 953 ntBASIC7.3□□□□□ -1.24
Ccdc9Q8VC31 Gm21936-201ENSMUST00000221442 435 ntAPPRIS P1 BASIC7.3□□□□□ -1.24
Ccdc9Q8VC31 AC154248.1-201ENSMUST00000222072 495 ntTSL 5 BASIC7.3□□□□□ -1.24
Ccdc9Q8VC31 4930474N09Rik-201ENSMUST00000223511 1176 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
Ccdc9Q8VC31 AC170086.2-201ENSMUST00000224733 803 ntBASIC7.3□□□□□ -1.24
Ccdc9Q8VC31 Olfr49-201ENSMUST00000059996 1030 ntAPPRIS P1 BASIC7.3□□□□□ -1.24
Ccdc9Q8VC31 Rps11-ps4-201ENSMUST00000062226 474 ntBASIC7.3□□□□□ -1.24
Ccdc9Q8VC31 Gm23734-201ENSMUST00000083753 109 ntBASIC7.3□□□□□ -1.24
Ccdc9Q8VC31 Gm25189-201ENSMUST00000083911 164 ntBASIC7.3□□□□□ -1.24
Ccdc9Q8VC31 Vmn1r71-201ENSMUST00000079113 4996 ntAPPRIS P2 BASIC7.3□□□□□ -1.24
Ccdc9Q8VC31 Vmn2r109-201ENSMUST00000167093 2577 ntAPPRIS P1 TSL 5 BASIC7.3□□□□□ -1.24
Ccdc9Q8VC31 Gm16185-201ENSMUST00000125071 3207 ntTSL 5 BASIC7.3□□□□□ -1.24
Ccdc9Q8VC31 Gm42535-201ENSMUST00000197312 1399 ntBASIC7.3□□□□□ -1.24
Ccdc9Q8VC31 Zfp369-202ENSMUST00000126879 2909 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
Ccdc9Q8VC31 Olfr911-ps1-202ENSMUST00000216496 3576 ntAPPRIS P1 TSL 5 BASIC7.3□□□□□ -1.24
Ccdc9Q8VC31 Gng12-201ENSMUST00000043148 4248 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
Ccdc9Q8VC31 Vmn2r97-201ENSMUST00000168710 2586 ntAPPRIS P1 TSL 5 BASIC7.29□□□□□ -1.24
Ccdc9Q8VC31 Gm29488-201ENSMUST00000191427 2402 ntBASIC7.29□□□□□ -1.24
Ccdc9Q8VC31 Vmn1r34-204ENSMUST00000226999 3048 ntAPPRIS P1 BASIC7.29□□□□□ -1.24
Ccdc9Q8VC31 B130006D01Rik-201ENSMUST00000100534 3124 ntAPPRIS P1 BASIC7.29□□□□□ -1.24
Ccdc9Q8VC31 Gm17173-201ENSMUST00000168000 2867 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
Ccdc9Q8VC31 Ube2u-202ENSMUST00000133493 1537 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
Ccdc9Q8VC31 Zbed4-ps1-201ENSMUST00000186734 3466 ntBASIC7.29□□□□□ -1.24
Ccdc9Q8VC31 Gm25593-201ENSMUST00000102272 96 ntBASIC7.29□□□□□ -1.24
Ccdc9Q8VC31 Gm14399-202ENSMUST00000108929 813 ntTSL 5 BASIC7.29□□□□□ -1.24
Ccdc9Q8VC31 Gm7113-201ENSMUST00000120477 958 ntBASIC7.29□□□□□ -1.24
Ccdc9Q8VC31 Rhox3b-ps-201ENSMUST00000121045 868 ntBASIC7.29□□□□□ -1.24
Ccdc9Q8VC31 BC064078-201ENSMUST00000122939 570 ntBASIC7.29□□□□□ -1.24
Ccdc9Q8VC31 Gm15290-201ENSMUST00000132880 577 ntTSL 3 BASIC7.29□□□□□ -1.24
Ccdc9Q8VC31 Gm14218-201ENSMUST00000137802 595 ntTSL 5 BASIC7.29□□□□□ -1.24
Ccdc9Q8VC31 Gm10364-202ENSMUST00000153034 1001 ntBASIC7.29□□□□□ -1.24
Ccdc9Q8VC31 Gm25969-201ENSMUST00000157166 132 ntBASIC7.29□□□□□ -1.24
Ccdc9Q8VC31 Gm22361-201ENSMUST00000158435 176 ntBASIC7.29□□□□□ -1.24
Ccdc9Q8VC31 Krtap11-1-201ENSMUST00000171542 1008 ntAPPRIS P1 BASIC7.29□□□□□ -1.24
Ccdc9Q8VC31 B230104I21Rik-201ENSMUST00000181143 876 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
Ccdc9Q8VC31 Mir6367-201ENSMUST00000183385 102 ntBASIC7.29□□□□□ -1.24
Ccdc9Q8VC31 Gm28835-202ENSMUST00000189206 543 ntTSL 3 BASIC7.29□□□□□ -1.24
Ccdc9Q8VC31 Gm37838-201ENSMUST00000194464 312 ntBASIC7.29□□□□□ -1.24
Ccdc9Q8VC31 4930566N20Rik-201ENSMUST00000195173 1199 ntBASIC7.29□□□□□ -1.24
Ccdc9Q8VC31 Gm19185-201ENSMUST00000196365 643 ntBASIC7.29□□□□□ -1.24
Ccdc9Q8VC31 Zfp799-203ENSMUST00000201876 632 ntTSL 3 BASIC7.29□□□□□ -1.24
Ccdc9Q8VC31 Gm43964-201ENSMUST00000203570 301 ntTSL 3 BASIC7.29□□□□□ -1.24
Ccdc9Q8VC31 Gm44277-201ENSMUST00000205128 649 ntBASIC7.29□□□□□ -1.24
Ccdc9Q8VC31 Gm2221-201ENSMUST00000209342 418 ntBASIC7.29□□□□□ -1.24
Ccdc9Q8VC31 AC134606.1-201ENSMUST00000216324 721 ntTSL 3 BASIC7.29□□□□□ -1.24
Ccdc9Q8VC31 AC154692.1-202ENSMUST00000226632 1231 ntBASIC7.29□□□□□ -1.24
Ccdc9Q8VC31 Hamp2-201ENSMUST00000074671 420 ntAPPRIS ALT2 TSL 1 (best) BASIC7.29□□□□□ -1.24
Ccdc9Q8VC31 Vmn1r78-201ENSMUST00000078039 942 ntAPPRIS P1 BASIC7.29□□□□□ -1.24
Ccdc9Q8VC31 Ssxb3-201ENSMUST00000089374 824 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
Ccdc9Q8VC31 Gm20449-201ENSMUST00000094532 3847 ntAPPRIS P1 TSL 2 BASIC7.29□□□□□ -1.24
Ccdc9Q8VC31 Olfr653-201ENSMUST00000098174 1046 ntAPPRIS P1 BASIC7.29□□□□□ -1.24
Ccdc9Q8VC31 Vmn1r173-202ENSMUST00000226233 9416 ntAPPRIS P1 BASIC7.29□□□□□ -1.24
Ccdc9Q8VC31 Smarca2-203ENSMUST00000112637 1962 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
Ccdc9Q8VC31 Gm45175-201ENSMUST00000208295 1375 ntTSL 5 BASIC7.29□□□□□ -1.24
Ccdc9Q8VC31 Cpa2-201ENSMUST00000096066 1388 ntAPPRIS P1 TSL 5 BASIC7.29□□□□□ -1.24
Ccdc9Q8VC31 Ash1l-201ENSMUST00000090933 11268 ntAPPRIS P1 TSL 5 BASIC7.29□□□□□ -1.24
Ccdc9Q8VC31 4930402H24Rik-203ENSMUST00000119422 3815 ntAPPRIS ALT2 TSL 1 (best) BASIC7.29□□□□□ -1.24
Ccdc9Q8VC31 Atp7a-201ENSMUST00000055941 4866 ntAPPRIS ALT2 TSL 1 (best) BASIC7.29□□□□□ -1.24
Ccdc9Q8VC31 Enpp3-201ENSMUST00000020169 4253 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
Ccdc9Q8VC31 Gm14569-204ENSMUST00000169499 5181 ntAPPRIS P1 TSL 5 BASIC7.29□□□□□ -1.24
Ccdc9Q8VC31 Vmn2r-ps38-201ENSMUST00000173752 2573 ntBASIC7.28□□□□□ -1.24
Ccdc9Q8VC31 Gm44827-201ENSMUST00000207963 2229 ntTSL 5 BASIC7.28□□□□□ -1.24
Ccdc9Q8VC31 Gm8822-201ENSMUST00000118948 2347 ntBASIC7.28□□□□□ -1.24
Ccdc9Q8VC31 Olfr487-202ENSMUST00000216489 3785 ntAPPRIS P1 TSL 5 BASIC7.28□□□□□ -1.24
Ccdc9Q8VC31 Ugt2a2-201ENSMUST00000079811 2539 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
Ccdc9Q8VC31 Nlrp4c-204ENSMUST00000208360 3058 ntAPPRIS P1 TSL 5 BASIC7.28□□□□□ -1.24
Ccdc9Q8VC31 AC115910.1-201ENSMUST00000221188 4275 ntBASIC7.28□□□□□ -1.24
Ccdc9Q8VC31 Gm22774-201ENSMUST00000102084 109 ntBASIC7.28□□□□□ -1.24
Ccdc9Q8VC31 Gm26417-201ENSMUST00000104274 135 ntBASIC7.28□□□□□ -1.24
Ccdc9Q8VC31 Gm25509-201ENSMUST00000116985 106 ntBASIC7.28□□□□□ -1.24
Ccdc9Q8VC31 Gm12131-201ENSMUST00000117479 359 ntBASIC7.28□□□□□ -1.24
Ccdc9Q8VC31 Gm14876-201ENSMUST00000120795 327 ntBASIC7.28□□□□□ -1.24
Ccdc9Q8VC31 Gm11263-201ENSMUST00000121853 749 ntBASIC7.28□□□□□ -1.24
Ccdc9Q8VC31 Gm14135-201ENSMUST00000135438 591 ntTSL 3 BASIC7.28□□□□□ -1.24
Ccdc9Q8VC31 Gm11423-202ENSMUST00000152784 686 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
Ccdc9Q8VC31 Gm14637-201ENSMUST00000156516 444 ntTSL 2 BASIC7.28□□□□□ -1.24
Ccdc9Q8VC31 Gm24756-201ENSMUST00000177002 96 ntBASIC7.28□□□□□ -1.24
Ccdc9Q8VC31 Obox3-ps3-201ENSMUST00000177242 1004 ntBASIC7.28□□□□□ -1.24
Ccdc9Q8VC31 Gm6223-201ENSMUST00000178436 871 ntBASIC7.28□□□□□ -1.24
Ccdc9Q8VC31 Gm28975-201ENSMUST00000186412 686 ntBASIC7.28□□□□□ -1.24
Ccdc9Q8VC31 Gm10640-202ENSMUST00000190947 1134 ntTSL 2 BASIC7.28□□□□□ -1.24
Ccdc9Q8VC31 Gm37294-201ENSMUST00000193461 494 ntTSL 3 BASIC7.28□□□□□ -1.24
Ccdc9Q8VC31 Gm37719-201ENSMUST00000194615 292 ntBASIC7.28□□□□□ -1.24
Ccdc9Q8VC31 4833404L02Rik-201ENSMUST00000206290 908 ntBASIC7.28□□□□□ -1.24
Ccdc9Q8VC31 Gm44565-201ENSMUST00000208194 269 ntBASIC7.28□□□□□ -1.24
Retrieved 100 of 76,532 protein–RNA pairs in 66.7 ms