Protein–RNA interactions for Protein: Q8CFK2

Brf1, Transcription factor IIIB 90 kDa subunit, mousemouse

Predictions only

Length 676 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brf1Q8CFK2 Gm26608-202ENSMUST00000181503 1362 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
Brf1Q8CFK2 Gm25564-201ENSMUST00000104604 132 ntBASIC7.39□□□□□ -1.23
Brf1Q8CFK2 Anp32-ps-201ENSMUST00000118265 388 ntBASIC7.39□□□□□ -1.23
Brf1Q8CFK2 Gm12396-201ENSMUST00000121600 306 ntBASIC7.39□□□□□ -1.23
Brf1Q8CFK2 Gm11879-201ENSMUST00000121885 702 ntBASIC7.39□□□□□ -1.23
Brf1Q8CFK2 Scgb2b23-ps-201ENSMUST00000122094 330 ntBASIC7.39□□□□□ -1.23
Brf1Q8CFK2 Gm13417-201ENSMUST00000155475 533 ntTSL 2 BASIC7.39□□□□□ -1.23
Brf1Q8CFK2 Gm26167-201ENSMUST00000158423 253 ntBASIC7.39□□□□□ -1.23
Brf1Q8CFK2 Gm16102-201ENSMUST00000160955 420 ntBASIC7.39□□□□□ -1.23
Brf1Q8CFK2 Gm5277-201ENSMUST00000164923 556 ntBASIC7.39□□□□□ -1.23
Brf1Q8CFK2 Gm5916-201ENSMUST00000168452 1142 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
Brf1Q8CFK2 Gm6526-202ENSMUST00000179860 591 ntAPPRIS ALT2 TSL 5 BASIC7.39□□□□□ -1.23
Brf1Q8CFK2 Gm26692-201ENSMUST00000180428 688 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
Brf1Q8CFK2 Gm28221-201ENSMUST00000185617 347 ntTSL 5 BASIC7.39□□□□□ -1.23
Brf1Q8CFK2 Gm28482-201ENSMUST00000189350 452 ntTSL 5 BASIC7.39□□□□□ -1.23
Brf1Q8CFK2 Gm44200-201ENSMUST00000204883 662 ntTSL 5 BASIC7.39□□□□□ -1.23
Brf1Q8CFK2 Gm7368-201ENSMUST00000213307 367 ntBASIC7.39□□□□□ -1.23
Brf1Q8CFK2 AC108846.2-201ENSMUST00000214925 731 ntTSL 5 BASIC7.39□□□□□ -1.23
Brf1Q8CFK2 Gm8863-201ENSMUST00000216630 926 ntBASIC7.39□□□□□ -1.23
Brf1Q8CFK2 Gm18405-201ENSMUST00000220743 511 ntBASIC7.39□□□□□ -1.23
Brf1Q8CFK2 AC129219.1-201ENSMUST00000224336 448 ntBASIC7.39□□□□□ -1.23
Brf1Q8CFK2 CT010453.2-201ENSMUST00000227005 483 ntBASIC7.39□□□□□ -1.23
Brf1Q8CFK2 AC165437.1-201ENSMUST00000228640 536 ntBASIC7.39□□□□□ -1.23
Brf1Q8CFK2 Olfr532-201ENSMUST00000073226 930 ntAPPRIS P1 BASIC7.39□□□□□ -1.23
Brf1Q8CFK2 Mir365-2-201ENSMUST00000083555 112 ntBASIC7.39□□□□□ -1.23
Brf1Q8CFK2 9430062P05Rik-201ENSMUST00000192703 3345 ntBASIC7.39□□□□□ -1.23
Brf1Q8CFK2 Vmn1r40-205ENSMUST00000228642 2862 ntAPPRIS P1 BASIC7.39□□□□□ -1.23
Brf1Q8CFK2 Ccdc110-201ENSMUST00000095326 2656 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
Brf1Q8CFK2 Ect2-202ENSMUST00000108298 4024 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
Brf1Q8CFK2 Adam30-201ENSMUST00000050342 3510 ntAPPRIS P1 BASIC7.39□□□□□ -1.23
Brf1Q8CFK2 Kat7-202ENSMUST00000092766 3414 ntTSL 5 BASIC7.39□□□□□ -1.23
Brf1Q8CFK2 Olfr907-203ENSMUST00000214264 1910 ntAPPRIS P1 TSL 5 BASIC7.39□□□□□ -1.23
Brf1Q8CFK2 Cx3cr1-202ENSMUST00000177637 3156 ntAPPRIS P1 TSL 5 BASIC7.38□□□□□ -1.23
Brf1Q8CFK2 Gm42874-201ENSMUST00000198888 1774 ntBASIC7.38□□□□□ -1.23
Brf1Q8CFK2 Hrh2-202ENSMUST00000209846 4074 ntAPPRIS ALT2 TSL 5 BASIC7.38□□□□□ -1.23
Brf1Q8CFK2 Gm43874-201ENSMUST00000204853 2798 ntBASIC7.38□□□□□ -1.23
Brf1Q8CFK2 Akt3-202ENSMUST00000111159 4906 ntAPPRIS P1 TSL 5 BASIC7.38□□□□□ -1.23
Brf1Q8CFK2 Gm5128-202ENSMUST00000180198 3836 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
Brf1Q8CFK2 Vmn1r218-202ENSMUST00000226692 10430 ntAPPRIS P2 BASIC7.38□□□□□ -1.23
Brf1Q8CFK2 4921524L21Rik-201ENSMUST00000044829 1480 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
Brf1Q8CFK2 Asap1-208ENSMUST00000176014 3435 ntAPPRIS ALT2 TSL 5 BASIC7.38□□□□□ -1.23
Brf1Q8CFK2 Catsperg2-209ENSMUST00000209126 3438 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
Brf1Q8CFK2 Usp17lc-202ENSMUST00000106892 2403 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
Brf1Q8CFK2 Gm37926-201ENSMUST00000191922 2424 ntBASIC7.38□□□□□ -1.23
Brf1Q8CFK2 Fstl5-203ENSMUST00000160261 3173 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
Brf1Q8CFK2 Lig4-202ENSMUST00000170033 3105 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
Brf1Q8CFK2 Gm38276-201ENSMUST00000192446 1343 ntBASIC7.38□□□□□ -1.23
Brf1Q8CFK2 Hsd3b3-202ENSMUST00000094050 1327 ntTSL 5 BASIC7.38□□□□□ -1.23
Brf1Q8CFK2 Homez-201ENSMUST00000081162 5609 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
Brf1Q8CFK2 Zfp35-201ENSMUST00000074941 3040 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
Brf1Q8CFK2 Gm15161-201ENSMUST00000117340 387 ntBASIC7.38□□□□□ -1.23
Brf1Q8CFK2 Olfr1069-ps1-201ENSMUST00000120755 965 ntBASIC7.38□□□□□ -1.23
Brf1Q8CFK2 Gm12140-201ENSMUST00000121214 544 ntBASIC7.38□□□□□ -1.23
Brf1Q8CFK2 Gm11341-201ENSMUST00000122316 447 ntBASIC7.38□□□□□ -1.23
Brf1Q8CFK2 4930586N03Rik-201ENSMUST00000122940 881 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
Brf1Q8CFK2 2610001J05Rik-202ENSMUST00000155856 1077 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
Brf1Q8CFK2 Vmn1r-ps80-201ENSMUST00000174838 966 ntBASIC7.38□□□□□ -1.23
Brf1Q8CFK2 Gm24081-201ENSMUST00000175177 125 ntBASIC7.38□□□□□ -1.23
Brf1Q8CFK2 Gm26652-201ENSMUST00000180592 373 ntTSL 3 BASIC7.38□□□□□ -1.23
Brf1Q8CFK2 Gm5430-201ENSMUST00000182525 915 ntBASIC7.38□□□□□ -1.23
Brf1Q8CFK2 Gm28054-201ENSMUST00000187280 872 ntTSL 3 BASIC7.38□□□□□ -1.23
Brf1Q8CFK2 Ly6e-206ENSMUST00000187284 654 ntAPPRIS P1 TSL 5 BASIC7.38□□□□□ -1.23
Brf1Q8CFK2 Gm37774-201ENSMUST00000194401 245 ntBASIC7.38□□□□□ -1.23
Brf1Q8CFK2 Gm37830-201ENSMUST00000195282 837 ntTSL 5 BASIC7.38□□□□□ -1.23
Brf1Q8CFK2 Ighv5-3-201ENSMUST00000195336 322 ntBASIC7.38□□□□□ -1.23
Brf1Q8CFK2 Gm1969-201ENSMUST00000198125 1220 ntBASIC7.38□□□□□ -1.23
Brf1Q8CFK2 Gm44137-201ENSMUST00000203670 367 ntBASIC7.38□□□□□ -1.23
Brf1Q8CFK2 Gm44366-201ENSMUST00000204933 674 ntTSL 3 BASIC7.38□□□□□ -1.23
Brf1Q8CFK2 Gm44169-201ENSMUST00000205133 359 ntTSL 2 BASIC7.38□□□□□ -1.23
Brf1Q8CFK2 Gm5318-201ENSMUST00000205249 406 ntBASIC7.38□□□□□ -1.23
Brf1Q8CFK2 Gm44585-201ENSMUST00000207150 607 ntBASIC7.38□□□□□ -1.23
Brf1Q8CFK2 Gm44656-201ENSMUST00000208428 490 ntBASIC7.38□□□□□ -1.23
Brf1Q8CFK2 Gm20586-201ENSMUST00000210122 547 ntBASIC7.38□□□□□ -1.23
Brf1Q8CFK2 AC102435.1-205ENSMUST00000221064 1097 ntTSL 5 BASIC7.38□□□□□ -1.23
Brf1Q8CFK2 Gm9237-201ENSMUST00000221499 548 ntBASIC7.38□□□□□ -1.23
Brf1Q8CFK2 AC132954.2-201ENSMUST00000222400 403 ntBASIC7.38□□□□□ -1.23
Brf1Q8CFK2 AC139294.2-201ENSMUST00000227159 285 ntBASIC7.38□□□□□ -1.23
Brf1Q8CFK2 AC166105.1-201ENSMUST00000227512 482 ntBASIC7.38□□□□□ -1.23
Brf1Q8CFK2 Cdh8-201ENSMUST00000093249 3790 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
Brf1Q8CFK2 Vmn2r-ps21-201ENSMUST00000177115 2947 ntBASIC7.38□□□□□ -1.23
Brf1Q8CFK2 Irgm2-202ENSMUST00000108836 3459 ntAPPRIS P2 TSL 1 (best) BASIC7.38□□□□□ -1.23
Brf1Q8CFK2 Irgm2-201ENSMUST00000058704 3470 ntAPPRIS P2 TSL 2 BASIC7.38□□□□□ -1.23
Brf1Q8CFK2 Nr3c1-204ENSMUST00000115571 6327 ntAPPRIS P2 TSL 1 (best) BASIC7.38□□□□□ -1.23
Brf1Q8CFK2 Gm43502-201ENSMUST00000200263 2596 ntBASIC7.38□□□□□ -1.23
Brf1Q8CFK2 Gm43425-201ENSMUST00000201793 3291 ntBASIC7.38□□□□□ -1.23
Brf1Q8CFK2 AC158938.1-201ENSMUST00000225372 6720 ntBASIC7.38□□□□□ -1.23
Brf1Q8CFK2 Gm6526-201ENSMUST00000100643 1723 ntAPPRIS P5 TSL 5 BASIC7.38□□□□□ -1.23
Brf1Q8CFK2 Gm44113-201ENSMUST00000203510 3041 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
Brf1Q8CFK2 Olfr1048-202ENSMUST00000215607 2981 ntAPPRIS ALT2 TSL 3 BASIC7.38□□□□□ -1.23
Brf1Q8CFK2 4930555F03Rik-202ENSMUST00000126285 3604 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
Brf1Q8CFK2 Dlg2-204ENSMUST00000107196 7490 ntAPPRIS P2 TSL 1 (best) BASIC7.38□□□□□ -1.23
Brf1Q8CFK2 AC125328.1-201ENSMUST00000226812 2265 ntBASIC7.38□□□□□ -1.23
Brf1Q8CFK2 Ipo11-205ENSMUST00000186033 4147 ntTSL 5 BASIC7.37□□□□□ -1.23
Brf1Q8CFK2 1700024B05Rik-202ENSMUST00000168972 1573 ntAPPRIS ALT2 TSL 5 BASIC7.37□□□□□ -1.23
Brf1Q8CFK2 Arhgef38-202ENSMUST00000147041 6541 ntAPPRIS P1 TSL 5 BASIC7.37□□□□□ -1.23
Brf1Q8CFK2 Mbd3l2-201ENSMUST00000051008 2075 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
Brf1Q8CFK2 Utp14b-201ENSMUST00000053760 7393 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
Brf1Q8CFK2 Gm37289-201ENSMUST00000195409 1402 ntBASIC7.37□□□□□ -1.23
Brf1Q8CFK2 Nmd3-201ENSMUST00000029358 9135 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
Brf1Q8CFK2 Adgrg6-203ENSMUST00000208429 3582 ntAPPRIS ALT2 TSL 5 BASIC7.37□□□□□ -1.23
Retrieved 100 of 76,532 protein–RNA pairs in 82.1 ms