Protein–RNA interactions for Protein: Q8CEG5

Ccdc28b, Coiled-coil domain-containing protein 28B, mousemouse

Predictions only

Length 200 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28bQ8CEG5 Eqtn-202ENSMUST00000107097 1164 ntAPPRIS ALT2 TSL 1 (best) BASIC5.95□□□□□ -1.46
Ccdc28bQ8CEG5 Gm12573-201ENSMUST00000118158 286 ntBASIC5.95□□□□□ -1.46
Ccdc28bQ8CEG5 Gm12677-201ENSMUST00000118668 426 ntBASIC5.95□□□□□ -1.46
Ccdc28bQ8CEG5 Gm12929-201ENSMUST00000122406 370 ntBASIC5.95□□□□□ -1.46
Ccdc28bQ8CEG5 Gm11681-201ENSMUST00000127337 870 ntTSL 2 BASIC5.95□□□□□ -1.46
Ccdc28bQ8CEG5 Gm10658-201ENSMUST00000128125 1241 ntTSL 2 BASIC5.95□□□□□ -1.46
Ccdc28bQ8CEG5 Gm4764-201ENSMUST00000130207 1233 ntBASIC5.95□□□□□ -1.46
Ccdc28bQ8CEG5 Ttc39aos1-201ENSMUST00000150239 796 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
Ccdc28bQ8CEG5 Gm16343-201ENSMUST00000162027 410 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
Ccdc28bQ8CEG5 Mup8-202ENSMUST00000163931 986 ntAPPRIS P3 TSL 5 BASIC5.95□□□□□ -1.46
Ccdc28bQ8CEG5 Rab11a-206ENSMUST00000169058 462 ntTSL 5 BASIC5.95□□□□□ -1.46
Ccdc28bQ8CEG5 Gm9504-201ENSMUST00000196322 468 ntBASIC5.95□□□□□ -1.46
Ccdc28bQ8CEG5 Gm43241-201ENSMUST00000198375 364 ntTSL 3 BASIC5.95□□□□□ -1.46
Ccdc28bQ8CEG5 Gm8190-201ENSMUST00000199603 586 ntBASIC5.95□□□□□ -1.46
Ccdc28bQ8CEG5 Gm5554-201ENSMUST00000199726 1206 ntBASIC5.95□□□□□ -1.46
Ccdc28bQ8CEG5 Gm5314-201ENSMUST00000204852 466 ntBASIC5.95□□□□□ -1.46
Ccdc28bQ8CEG5 Gm35453-201ENSMUST00000210304 331 ntTSL 3 BASIC5.95□□□□□ -1.46
Ccdc28bQ8CEG5 Gm9535-201ENSMUST00000218499 768 ntBASIC5.95□□□□□ -1.46
Ccdc28bQ8CEG5 C230072F16Rik-203ENSMUST00000220322 1136 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
Ccdc28bQ8CEG5 Gm18363-201ENSMUST00000221671 730 ntBASIC5.95□□□□□ -1.46
Ccdc28bQ8CEG5 Tmed10-203ENSMUST00000222585 619 ntTSL 3 BASIC5.95□□□□□ -1.46
Ccdc28bQ8CEG5 AC161252.1-201ENSMUST00000225536 467 ntBASIC5.95□□□□□ -1.46
Ccdc28bQ8CEG5 AC129017.2-201ENSMUST00000226118 1284 ntBASIC5.95□□□□□ -1.46
Ccdc28bQ8CEG5 Sox6-204ENSMUST00000166877 8079 ntAPPRIS ALT2 TSL 5 BASIC5.95□□□□□ -1.46
Ccdc28bQ8CEG5 Neto2-203ENSMUST00000209479 4936 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
Ccdc28bQ8CEG5 Gm10693-202ENSMUST00000205904 4007 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
Ccdc28bQ8CEG5 Cd44-203ENSMUST00000099673 2848 ntAPPRIS ALT2 TSL 1 (best) BASIC5.95□□□□□ -1.46
Ccdc28bQ8CEG5 Gm38067-201ENSMUST00000192346 1911 ntBASIC5.95□□□□□ -1.46
Ccdc28bQ8CEG5 Fam107b-209ENSMUST00000226435 3602 ntBASIC5.95□□□□□ -1.46
Ccdc28bQ8CEG5 AC120347.1-201ENSMUST00000223326 1639 ntBASIC5.95□□□□□ -1.46
Ccdc28bQ8CEG5 Pigb-201ENSMUST00000093819 2866 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
Ccdc28bQ8CEG5 Il31ra-201ENSMUST00000051756 3680 ntAPPRIS P2 TSL 1 (best) BASIC5.95□□□□□ -1.46
Ccdc28bQ8CEG5 Tmem56-201ENSMUST00000029777 6248 ntAPPRIS P2 TSL 1 (best) BASIC5.95□□□□□ -1.46
Ccdc28bQ8CEG5 Cyp2c40-201ENSMUST00000160476 1803 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
Ccdc28bQ8CEG5 Olfr266-203ENSMUST00000216610 1520 ntAPPRIS P1 TSL 5 BASIC5.94□□□□□ -1.46
Ccdc28bQ8CEG5 Gm15789-201ENSMUST00000118992 1359 ntBASIC5.94□□□□□ -1.46
Ccdc28bQ8CEG5 Gm6145-206ENSMUST00000211251 2850 ntTSL 5 BASIC5.94□□□□□ -1.46
Ccdc28bQ8CEG5 Vmn2r114-201ENSMUST00000168033 2571 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
Ccdc28bQ8CEG5 Olfr329-ps-203ENSMUST00000219448 4052 ntAPPRIS P2 TSL 5 BASIC5.94□□□□□ -1.46
Ccdc28bQ8CEG5 AC162908.1-201ENSMUST00000219164 4563 ntBASIC5.94□□□□□ -1.46
Ccdc28bQ8CEG5 4933404K08Rik-201ENSMUST00000156977 1434 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
Ccdc28bQ8CEG5 Myo1b-204ENSMUST00000114541 4616 ntTSL 5 BASIC5.94□□□□□ -1.46
Ccdc28bQ8CEG5 Slco1c1-203ENSMUST00000203140 2771 ntAPPRIS ALT2 TSL 5 BASIC5.94□□□□□ -1.46
Ccdc28bQ8CEG5 Gm19272-201ENSMUST00000184133 1753 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
Ccdc28bQ8CEG5 Igkv3-5-201ENSMUST00000103400 382 ntAPPRIS P1 BASIC5.94□□□□□ -1.46
Ccdc28bQ8CEG5 Gm13626-201ENSMUST00000119435 402 ntBASIC5.94□□□□□ -1.46
Ccdc28bQ8CEG5 Gm11484-201ENSMUST00000119808 338 ntBASIC5.94□□□□□ -1.46
Ccdc28bQ8CEG5 Gm14741-201ENSMUST00000120777 1009 ntBASIC5.94□□□□□ -1.46
Ccdc28bQ8CEG5 Gm22025-201ENSMUST00000122734 302 ntBASIC5.94□□□□□ -1.46
Ccdc28bQ8CEG5 6430710C18Rik-202ENSMUST00000125746 509 ntTSL 5 BASIC5.94□□□□□ -1.46
Ccdc28bQ8CEG5 Gm11184-201ENSMUST00000126437 268 ntTSL 3 BASIC5.94□□□□□ -1.46
Ccdc28bQ8CEG5 2210411M09Rik-201ENSMUST00000128545 643 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
Ccdc28bQ8CEG5 Fam229b-205ENSMUST00000135785 674 ntAPPRIS P1 TSL 3 BASIC5.94□□□□□ -1.46
Ccdc28bQ8CEG5 Gm14216-201ENSMUST00000136046 409 ntTSL 3 BASIC5.94□□□□□ -1.46
Ccdc28bQ8CEG5 Gm25277-201ENSMUST00000157266 324 ntBASIC5.94□□□□□ -1.46
Ccdc28bQ8CEG5 Gm24157-201ENSMUST00000175265 111 ntBASIC5.94□□□□□ -1.46
Ccdc28bQ8CEG5 Gm20643-201ENSMUST00000177284 322 ntTSL 3 BASIC5.94□□□□□ -1.46
Ccdc28bQ8CEG5 Gm38326-201ENSMUST00000194030 686 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
Ccdc28bQ8CEG5 Gm7512-201ENSMUST00000195217 1170 ntBASIC5.94□□□□□ -1.46
Ccdc28bQ8CEG5 Gm38102-202ENSMUST00000196428 174 ntTSL 5 BASIC5.94□□□□□ -1.46
Ccdc28bQ8CEG5 Gm42707-201ENSMUST00000196620 322 ntTSL 5 BASIC5.94□□□□□ -1.46
Ccdc28bQ8CEG5 Gm42558-201ENSMUST00000200982 265 ntBASIC5.94□□□□□ -1.46
Ccdc28bQ8CEG5 Gm5306-201ENSMUST00000203325 757 ntBASIC5.94□□□□□ -1.46
Ccdc28bQ8CEG5 Gm39078-201ENSMUST00000207973 704 ntTSL 5 BASIC5.94□□□□□ -1.46
Ccdc28bQ8CEG5 Gm39119-201ENSMUST00000208466 951 ntTSL 5 BASIC5.94□□□□□ -1.46
Ccdc28bQ8CEG5 Gm31013-201ENSMUST00000213576 715 ntTSL 3 BASIC5.94□□□□□ -1.46
Ccdc28bQ8CEG5 Gm20234-201ENSMUST00000214134 717 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
Ccdc28bQ8CEG5 Gm8672-201ENSMUST00000221200 332 ntBASIC5.94□□□□□ -1.46
Ccdc28bQ8CEG5 Gm32526-201ENSMUST00000221878 981 ntBASIC5.94□□□□□ -1.46
Ccdc28bQ8CEG5 AC154849.2-201ENSMUST00000223781 974 ntBASIC5.94□□□□□ -1.46
Ccdc28bQ8CEG5 AC151730.1-201ENSMUST00000226106 448 ntBASIC5.94□□□□□ -1.46
Ccdc28bQ8CEG5 AC106830.2-201ENSMUST00000226624 943 ntBASIC5.94□□□□□ -1.46
Ccdc28bQ8CEG5 Il20-201ENSMUST00000027673 1186 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
Ccdc28bQ8CEG5 Olfr309-201ENSMUST00000055690 927 ntAPPRIS P1 BASIC5.94□□□□□ -1.46
Ccdc28bQ8CEG5 Mir425-201ENSMUST00000083645 85 ntBASIC5.94□□□□□ -1.46
Ccdc28bQ8CEG5 Olfr570-201ENSMUST00000098215 1045 ntAPPRIS P1 BASIC5.94□□□□□ -1.46
Ccdc28bQ8CEG5 AL670757.1-201ENSMUST00000223668 1959 ntBASIC5.94□□□□□ -1.46
Ccdc28bQ8CEG5 Olfr535-204ENSMUST00000214296 5120 ntAPPRIS P1 TSL 5 BASIC5.94□□□□□ -1.46
Ccdc28bQ8CEG5 Olfr934-203ENSMUST00000216823 2440 ntAPPRIS P1 TSL 5 BASIC5.94□□□□□ -1.46
Ccdc28bQ8CEG5 Meiob-201ENSMUST00000024972 1703 ntAPPRIS P1 TSL 5 BASIC5.94□□□□□ -1.46
Ccdc28bQ8CEG5 Vmn1r30-202ENSMUST00000226334 1946 ntAPPRIS P1 BASIC5.93□□□□□ -1.46
Ccdc28bQ8CEG5 Kat7-202ENSMUST00000092766 3414 ntTSL 5 BASIC5.93□□□□□ -1.46
Ccdc28bQ8CEG5 Chd9-202ENSMUST00000109614 11565 ntAPPRIS ALT2 TSL 5 BASIC5.93□□□□□ -1.46
Ccdc28bQ8CEG5 Pramel3-201ENSMUST00000113176 3673 ntAPPRIS P2 TSL 1 (best) BASIC5.93□□□□□ -1.46
Ccdc28bQ8CEG5 Vmn2r103-201ENSMUST00000172203 2571 ntAPPRIS P1 TSL 5 BASIC5.93□□□□□ -1.46
Ccdc28bQ8CEG5 Olfr328-203ENSMUST00000215717 2793 ntAPPRIS P1 TSL 5 BASIC5.93□□□□□ -1.46
Ccdc28bQ8CEG5 Gm42686-201ENSMUST00000199172 4108 ntBASIC5.93□□□□□ -1.46
Ccdc28bQ8CEG5 Olfr402-202ENSMUST00000216722 3566 ntAPPRIS P1 TSL 5 BASIC5.93□□□□□ -1.46
Ccdc28bQ8CEG5 Wdr49-201ENSMUST00000193989 2413 ntAPPRIS P1 TSL 5 BASIC5.93□□□□□ -1.46
Ccdc28bQ8CEG5 Igkv5-37-201ENSMUST00000103372 359 ntAPPRIS P1 BASIC5.93□□□□□ -1.46
Ccdc28bQ8CEG5 Ighv1-84-201ENSMUST00000103551 351 ntAPPRIS P1 BASIC5.93□□□□□ -1.46
Ccdc28bQ8CEG5 Defb45-201ENSMUST00000109834 385 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
Ccdc28bQ8CEG5 Taf7l-202ENSMUST00000113223 1155 ntTSL 5 BASIC5.93□□□□□ -1.46
Ccdc28bQ8CEG5 Rpl5-ps2-201ENSMUST00000119057 891 ntBASIC5.93□□□□□ -1.46
Ccdc28bQ8CEG5 Gm6142-201ENSMUST00000120290 325 ntBASIC5.93□□□□□ -1.46
Ccdc28bQ8CEG5 Vamp7-ps-201ENSMUST00000120334 655 ntBASIC5.93□□□□□ -1.46
Ccdc28bQ8CEG5 Gm12322-201ENSMUST00000121605 389 ntBASIC5.93□□□□□ -1.46
Ccdc28bQ8CEG5 Gm4789-201ENSMUST00000121708 1216 ntBASIC5.93□□□□□ -1.46
Ccdc28bQ8CEG5 Amy2-ps1-201ENSMUST00000122117 1117 ntBASIC5.93□□□□□ -1.46
Ccdc28bQ8CEG5 Gm12119-201ENSMUST00000136083 700 ntTSL 3 BASIC5.93□□□□□ -1.46
Retrieved 100 of 76,532 protein–RNA pairs in 102.4 ms