Protein–RNA interactions for Protein: Q8C0E3

Trim47, Tripartite motif-containing protein 47, mousemouse

Predictions only

Length 641 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim47Q8C0E3 Olfr342-201ENSMUST00000074192 1054 ntAPPRIS P1 BASIC8.03□□□□□ -1.12
Trim47Q8C0E3 Gm16020-201ENSMUST00000084281 210 ntBASIC8.03□□□□□ -1.12
Trim47Q8C0E3 Fpr-rs6-201ENSMUST00000095636 1020 ntAPPRIS P1 BASIC8.03□□□□□ -1.12
Trim47Q8C0E3 Zfp14-203ENSMUST00000207873 3411 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
Trim47Q8C0E3 Gm42772-201ENSMUST00000199945 3041 ntBASIC8.03□□□□□ -1.12
Trim47Q8C0E3 B3gnt5-207ENSMUST00000164397 4872 ntAPPRIS P1 TSL 5 BASIC8.03□□□□□ -1.12
Trim47Q8C0E3 Gm29123-201ENSMUST00000185808 3657 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
Trim47Q8C0E3 Nyap2-201ENSMUST00000068275 4919 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
Trim47Q8C0E3 Eif4e2-202ENSMUST00000076362 3394 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
Trim47Q8C0E3 5530400K19Rik-201ENSMUST00000193511 1916 ntBASIC8.03□□□□□ -1.12
Trim47Q8C0E3 AC113031.7-201ENSMUST00000228609 1928 ntBASIC8.03□□□□□ -1.12
Trim47Q8C0E3 CT025642.2-201ENSMUST00000225009 1649 ntBASIC8.03□□□□□ -1.12
Trim47Q8C0E3 Abcc12-203ENSMUST00000131423 4893 ntAPPRIS P1 TSL 5 BASIC8.03□□□□□ -1.12
Trim47Q8C0E3 Brox-201ENSMUST00000057062 3430 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
Trim47Q8C0E3 Gm32568-201ENSMUST00000212782 1421 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
Trim47Q8C0E3 Kcnab1-201ENSMUST00000049230 3245 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
Trim47Q8C0E3 Ubl7-209ENSMUST00000216925 1319 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
Trim47Q8C0E3 Fam193a-201ENSMUST00000094867 3696 ntAPPRIS ALT2 TSL 5 BASIC8.02□□□□□ -1.12
Trim47Q8C0E3 Cept1-202ENSMUST00000068301 2814 ntAPPRIS P3 TSL 1 (best) BASIC8.02□□□□□ -1.12
Trim47Q8C0E3 Rassf6-201ENSMUST00000031317 1958 ntAPPRIS P3 TSL 5 BASIC8.02□□□□□ -1.12
Trim47Q8C0E3 Gdi2-209ENSMUST00000223396 4303 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.12
Trim47Q8C0E3 Mapk10-206ENSMUST00000133069 2732 ntTSL 2 BASIC8.02□□□□□ -1.12
Trim47Q8C0E3 Pcm1-204ENSMUST00000211247 6484 ntAPPRIS ALT2 TSL 5 BASIC8.02□□□□□ -1.12
Trim47Q8C0E3 Gm37496-201ENSMUST00000191930 2509 ntBASIC8.02□□□□□ -1.12
Trim47Q8C0E3 Gm12295-201ENSMUST00000128453 3189 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
Trim47Q8C0E3 Olfr342-202ENSMUST00000216275 3818 ntAPPRIS P1 TSL 5 BASIC8.02□□□□□ -1.13
Trim47Q8C0E3 Gm28311-201ENSMUST00000185236 1497 ntTSL 5 BASIC8.02□□□□□ -1.13
Trim47Q8C0E3 Gm28549-202ENSMUST00000191354 1497 ntTSL 5 BASIC8.02□□□□□ -1.13
Trim47Q8C0E3 Gpr87-203ENSMUST00000200095 1499 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
Trim47Q8C0E3 Gm29761-201ENSMUST00000215964 1939 ntBASIC8.02□□□□□ -1.13
Trim47Q8C0E3 Ighv14-1-201ENSMUST00000103463 351 ntAPPRIS P1 BASIC8.02□□□□□ -1.13
Trim47Q8C0E3 Gm26416-201ENSMUST00000104280 134 ntBASIC8.02□□□□□ -1.13
Trim47Q8C0E3 Gm24608-201ENSMUST00000104381 136 ntBASIC8.02□□□□□ -1.13
Trim47Q8C0E3 Vmn1r120-201ENSMUST00000105202 918 ntAPPRIS P1 BASIC8.02□□□□□ -1.13
Trim47Q8C0E3 Gm26156-201ENSMUST00000116999 123 ntBASIC8.02□□□□□ -1.13
Trim47Q8C0E3 Vmn1r-ps127-201ENSMUST00000118007 478 ntBASIC8.02□□□□□ -1.13
Trim47Q8C0E3 Gm12268-201ENSMUST00000118398 442 ntBASIC8.02□□□□□ -1.13
Trim47Q8C0E3 Gm13785-201ENSMUST00000119099 690 ntBASIC8.02□□□□□ -1.13
Trim47Q8C0E3 Vmn1r190-ps-201ENSMUST00000155950 903 ntBASIC8.02□□□□□ -1.13
Trim47Q8C0E3 Gm22491-201ENSMUST00000157190 102 ntBASIC8.02□□□□□ -1.13
Trim47Q8C0E3 Gm16577-201ENSMUST00000161579 471 ntTSL 3 BASIC8.02□□□□□ -1.13
Trim47Q8C0E3 Gm6337-202ENSMUST00000170613 997 ntAPPRIS ALT2 TSL 5 BASIC8.02□□□□□ -1.13
Trim47Q8C0E3 Gm20690-201ENSMUST00000177341 315 ntBASIC8.02□□□□□ -1.13
Trim47Q8C0E3 Gm5039-201ENSMUST00000177747 435 ntAPPRIS P1 BASIC8.02□□□□□ -1.13
Trim47Q8C0E3 Gm17660-202ENSMUST00000178967 337 ntAPPRIS P1 TSL 5 BASIC8.02□□□□□ -1.13
Trim47Q8C0E3 Gm27036-201ENSMUST00000182465 980 ntBASIC8.02□□□□□ -1.13
Trim47Q8C0E3 1500004A13Rik-207ENSMUST00000184640 610 ntTSL 3 BASIC8.02□□□□□ -1.13
Trim47Q8C0E3 Gm9999-202ENSMUST00000185832 335 ntAPPRIS ALT2 TSL 1 (best) BASIC8.02□□□□□ -1.13
Trim47Q8C0E3 Gm28070-201ENSMUST00000191502 445 ntBASIC8.02□□□□□ -1.13
Trim47Q8C0E3 Gm37712-201ENSMUST00000194295 647 ntTSL 3 BASIC8.02□□□□□ -1.13
Trim47Q8C0E3 Igkv13-82-201ENSMUST00000200308 346 ntBASIC8.02□□□□□ -1.13
Trim47Q8C0E3 Gm17906-201ENSMUST00000202480 901 ntBASIC8.02□□□□□ -1.13
Trim47Q8C0E3 Olfr519-202ENSMUST00000202706 945 ntAPPRIS P1 BASIC8.02□□□□□ -1.13
Trim47Q8C0E3 Gm44003-201ENSMUST00000203024 490 ntBASIC8.02□□□□□ -1.13
Trim47Q8C0E3 Gm43979-201ENSMUST00000203179 475 ntBASIC8.02□□□□□ -1.13
Trim47Q8C0E3 Gm38590-201ENSMUST00000209515 970 ntTSL 5 BASIC8.02□□□□□ -1.13
Trim47Q8C0E3 Gm9604-201ENSMUST00000211175 433 ntBASIC8.02□□□□□ -1.13
Trim47Q8C0E3 AC156639.1-201ENSMUST00000216503 660 ntTSL 3 BASIC8.02□□□□□ -1.13
Trim47Q8C0E3 Gm2398-201ENSMUST00000218347 883 ntBASIC8.02□□□□□ -1.13
Trim47Q8C0E3 CT030657.1-201ENSMUST00000222397 378 ntTSL 5 BASIC8.02□□□□□ -1.13
Trim47Q8C0E3 AV026068-218ENSMUST00000223980 575 ntBASIC8.02□□□□□ -1.13
Trim47Q8C0E3 AC154324.1-201ENSMUST00000226711 814 ntBASIC8.02□□□□□ -1.13
Trim47Q8C0E3 Vmn1r52-201ENSMUST00000079832 930 ntAPPRIS P1 BASIC8.02□□□□□ -1.13
Trim47Q8C0E3 Olfr657-201ENSMUST00000098171 960 ntAPPRIS P1 BASIC8.02□□□□□ -1.13
Trim47Q8C0E3 Olfr994-201ENSMUST00000099925 945 ntAPPRIS P1 BASIC8.02□□□□□ -1.13
Trim47Q8C0E3 Nt5dc1-203ENSMUST00000105512 2727 ntAPPRIS ALT2 TSL 1 (best) BASIC8.02□□□□□ -1.13
Trim47Q8C0E3 Ppfia2-203ENSMUST00000217854 8885 ntAPPRIS P2 TSL 1 (best) BASIC8.02□□□□□ -1.13
Trim47Q8C0E3 Olfr387-ps1-201ENSMUST00000134773 1513 ntAPPRIS P1 TSL 3 BASIC8.02□□□□□ -1.13
Trim47Q8C0E3 Kcna2-203ENSMUST00000197470 4370 ntAPPRIS P1 TSL 5 BASIC8.02□□□□□ -1.13
Trim47Q8C0E3 Srcap-214ENSMUST00000190390 9633 ntAPPRIS ALT2 TSL 5 BASIC8.02□□□□□ -1.13
Trim47Q8C0E3 9230106D20Rik-201ENSMUST00000052806 1406 ntTSL 5 BASIC8.02□□□□□ -1.13
Trim47Q8C0E3 Gm36041-201ENSMUST00000218971 2245 ntTSL 5 BASIC8.02□□□□□ -1.13
Trim47Q8C0E3 Gm37936-201ENSMUST00000194647 1322 ntBASIC8.02□□□□□ -1.13
Trim47Q8C0E3 Pfkfb2-203ENSMUST00000169659 2849 ntAPPRIS P3 TSL 1 (best) BASIC8.02□□□□□ -1.13
Trim47Q8C0E3 Phc1-208ENSMUST00000160696 4213 ntAPPRIS P3 TSL 1 (best) BASIC8.02□□□□□ -1.13
Trim47Q8C0E3 Clasp1-212ENSMUST00000189262 6918 ntAPPRIS ALT2 TSL 5 BASIC8.01□□□□□ -1.13
Trim47Q8C0E3 C230057A21Rik-201ENSMUST00000194944 3331 ntBASIC8.01□□□□□ -1.13
Trim47Q8C0E3 Gm28157-201ENSMUST00000187675 2165 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
Trim47Q8C0E3 Gm29146-201ENSMUST00000188904 2165 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
Trim47Q8C0E3 Gm28772-201ENSMUST00000189554 2165 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
Trim47Q8C0E3 Gm37547-201ENSMUST00000193277 2165 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
Trim47Q8C0E3 Liph-202ENSMUST00000074230 3703 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
Trim47Q8C0E3 Zfp846-202ENSMUST00000115557 12974 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
Trim47Q8C0E3 Peak1-204ENSMUST00000188142 7524 ntAPPRIS ALT2 TSL 1 (best) BASIC8.01□□□□□ -1.13
Trim47Q8C0E3 Efhb-201ENSMUST00000024725 2661 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
Trim47Q8C0E3 Trim30c-201ENSMUST00000106828 1716 ntAPPRIS P1 TSL 5 BASIC8.01□□□□□ -1.13
Trim47Q8C0E3 Gm13856-201ENSMUST00000126498 1742 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
Trim47Q8C0E3 Gm5141-201ENSMUST00000167516 1743 ntTSL 5 BASIC8.01□□□□□ -1.13
Trim47Q8C0E3 Prdm11-202ENSMUST00000111274 11678 ntTSL 5 BASIC8.01□□□□□ -1.13
Trim47Q8C0E3 Gm26575-201ENSMUST00000181714 2232 ntBASIC8.01□□□□□ -1.13
Trim47Q8C0E3 Focad-208ENSMUST00000159342 5456 ntAPPRIS ALT2 TSL 1 (best) BASIC8.01□□□□□ -1.13
Trim47Q8C0E3 Trbv19-201ENSMUST00000103276 566 ntAPPRIS P1 BASIC8.01□□□□□ -1.13
Trim47Q8C0E3 Igkv11-125-201ENSMUST00000103311 350 ntAPPRIS ALT2 BASIC8.01□□□□□ -1.13
Trim47Q8C0E3 Olfr1146-ps1-201ENSMUST00000117180 943 ntBASIC8.01□□□□□ -1.13
Trim47Q8C0E3 Gm12635-201ENSMUST00000117285 752 ntBASIC8.01□□□□□ -1.13
Trim47Q8C0E3 Xlr5d-ps-201ENSMUST00000117501 782 ntBASIC8.01□□□□□ -1.13
Trim47Q8C0E3 Gm14574-201ENSMUST00000120644 279 ntBASIC8.01□□□□□ -1.13
Trim47Q8C0E3 Gm14919-201ENSMUST00000120839 390 ntBASIC8.01□□□□□ -1.13
Trim47Q8C0E3 Vmn1r-ps111-201ENSMUST00000121014 997 ntBASIC8.01□□□□□ -1.13
Trim47Q8C0E3 Gm15157-201ENSMUST00000121852 702 ntBASIC8.01□□□□□ -1.13
Retrieved 100 of 76,532 protein–RNA pairs in 69.2 ms