Protein–RNA interactions for Protein: Q8C006

Trim35, Tripartite motif-containing protein 35, mousemouse

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim35Q8C006 Gm6204-201ENSMUST00000198872 457 ntBASIC9.02□□□□□ -0.97
Trim35Q8C006 Gm40323-201ENSMUST00000200649 645 ntTSL 2 BASIC9.02□□□□□ -0.97
Trim35Q8C006 BC049739-201ENSMUST00000202626 660 ntBASIC9.02□□□□□ -0.97
Trim35Q8C006 Gm45850-201ENSMUST00000212536 338 ntBASIC9.02□□□□□ -0.97
Trim35Q8C006 Gm20786-201ENSMUST00000212649 436 ntBASIC9.02□□□□□ -0.97
Trim35Q8C006 C230072F16Rik-201ENSMUST00000219184 1253 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
Trim35Q8C006 AC154368.1-201ENSMUST00000223465 205 ntTSL 5 BASIC9.02□□□□□ -0.97
Trim35Q8C006 CT009754.1-201ENSMUST00000223489 558 ntTSL 3 BASIC9.02□□□□□ -0.97
Trim35Q8C006 AC144949.1-201ENSMUST00000225358 422 ntBASIC9.02□□□□□ -0.97
Trim35Q8C006 Gm6187-201ENSMUST00000040649 960 ntBASIC9.02□□□□□ -0.97
Trim35Q8C006 Olfr1168-201ENSMUST00000079599 939 ntAPPRIS P1 BASIC9.02□□□□□ -0.97
Trim35Q8C006 Defb41-202ENSMUST00000097817 198 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Trim35Q8C006 Ackr4-203ENSMUST00000188000 2225 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Trim35Q8C006 Akap2-206ENSMUST00000107598 6830 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
Trim35Q8C006 Cyp2c40-201ENSMUST00000160476 1803 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Trim35Q8C006 Olfr411-203ENSMUST00000214769 2545 ntAPPRIS P1 TSL 5 BASIC9.02□□□□□ -0.97
Trim35Q8C006 Gabra6-202ENSMUST00000109286 1554 ntAPPRIS ALT2 TSL 5 BASIC9.02□□□□□ -0.97
Trim35Q8C006 Gm650-201ENSMUST00000144428 1551 ntBASIC9.02□□□□□ -0.97
Trim35Q8C006 Pcdh15-225ENSMUST00000149977 5843 ntAPPRIS ALT2 TSL 5 BASIC9.02□□□□□ -0.97
Trim35Q8C006 Nlrp3-201ENSMUST00000079476 3933 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Trim35Q8C006 Zcchc18-203ENSMUST00000113067 2259 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Trim35Q8C006 Zfp93-202ENSMUST00000108438 3508 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Trim35Q8C006 Cog4-202ENSMUST00000165867 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC9.02□□□□□ -0.97
Trim35Q8C006 Ugt2b37-201ENSMUST00000075858 1894 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Trim35Q8C006 Mamdc4-201ENSMUST00000095117 3990 ntAPPRIS P2 TSL 5 BASIC9.02□□□□□ -0.97
Trim35Q8C006 Cd2ap-201ENSMUST00000024709 5399 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Trim35Q8C006 Vmn1r84-202ENSMUST00000226408 2898 ntAPPRIS ALT2 BASIC9.02□□□□□ -0.97
Trim35Q8C006 Atf6-201ENSMUST00000027974 7246 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Trim35Q8C006 AC154270.2-201ENSMUST00000226755 2306 ntBASIC9.02□□□□□ -0.97
Trim35Q8C006 Nedd4-209ENSMUST00000184450 3329 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
Trim35Q8C006 Trip4-203ENSMUST00000122410 3915 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
Trim35Q8C006 Ctsc-203ENSMUST00000131108 3220 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
Trim35Q8C006 AC122937.3-201ENSMUST00000227906 1354 ntBASIC9.01□□□□□ -0.97
Trim35Q8C006 Pik3cg-202ENSMUST00000085469 4584 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Trim35Q8C006 Cdk15-202ENSMUST00000160662 2108 ntAPPRIS ALT2 TSL 5 BASIC9.01□□□□□ -0.97
Trim35Q8C006 AC154227.2-201ENSMUST00000228677 2101 ntBASIC9.01□□□□□ -0.97
Trim35Q8C006 Ganc-205ENSMUST00000135074 4780 ntAPPRIS P1 TSL 2 BASIC9.01□□□□□ -0.97
Trim35Q8C006 Acox2-201ENSMUST00000022271 2441 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Trim35Q8C006 A830010M20Rik-201ENSMUST00000060553 2439 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
Trim35Q8C006 Mast4-201ENSMUST00000099202 7709 ntAPPRIS ALT2 TSL 5 BASIC9.01□□□□□ -0.97
Trim35Q8C006 Lyrm9-203ENSMUST00000147875 8035 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Trim35Q8C006 Gm6116-201ENSMUST00000101121 1437 ntTSL 2 BASIC9.01□□□□□ -0.97
Trim35Q8C006 Gm9144-201ENSMUST00000101625 1008 ntBASIC9.01□□□□□ -0.97
Trim35Q8C006 Trav6-2-201ENSMUST00000103573 338 ntAPPRIS ALT2 BASIC9.01□□□□□ -0.97
Trim35Q8C006 Tnni2-201ENSMUST00000105971 732 ntAPPRIS P1 TSL 2 BASIC9.01□□□□□ -0.97
Trim35Q8C006 Gm6880-201ENSMUST00000114125 627 ntAPPRIS P1 TSL 5 BASIC9.01□□□□□ -0.97
Trim35Q8C006 Gm15363-201ENSMUST00000118897 631 ntBASIC9.01□□□□□ -0.97
Trim35Q8C006 Gm14407-201ENSMUST00000121260 447 ntBASIC9.01□□□□□ -0.97
Trim35Q8C006 AA623943-201ENSMUST00000121794 354 ntBASIC9.01□□□□□ -0.97
Trim35Q8C006 Gm13653-201ENSMUST00000122260 483 ntBASIC9.01□□□□□ -0.97
Trim35Q8C006 4930405D11Rik-201ENSMUST00000132218 568 ntTSL 3 BASIC9.01□□□□□ -0.97
Trim35Q8C006 Gm14936-201ENSMUST00000137765 2621 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
Trim35Q8C006 Ssxb6-201ENSMUST00000138642 518 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Trim35Q8C006 Lrmda-203ENSMUST00000159777 761 ntAPPRIS ALT2 TSL 3 BASIC9.01□□□□□ -0.97
Trim35Q8C006 Lrmda-206ENSMUST00000162540 742 ntAPPRIS ALT2 TSL 1 (best) BASIC9.01□□□□□ -0.97
Trim35Q8C006 Gm6486-201ENSMUST00000166202 434 ntBASIC9.01□□□□□ -0.97
Trim35Q8C006 Wfdc11-202ENSMUST00000167694 249 ntAPPRIS P1 TSL 5 BASIC9.01□□□□□ -0.97
Trim35Q8C006 Rpl6l-201ENSMUST00000171120 871 ntBASIC9.01□□□□□ -0.97
Trim35Q8C006 Tbc1d24-207ENSMUST00000171189 4592 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
Trim35Q8C006 Gm20394-201ENSMUST00000173304 942 ntTSL 5 BASIC9.01□□□□□ -0.97
Trim35Q8C006 Gm6633-201ENSMUST00000173851 270 ntBASIC9.01□□□□□ -0.97
Trim35Q8C006 Gm24466-201ENSMUST00000179978 109 ntBASIC9.01□□□□□ -0.97
Trim35Q8C006 Gm7611-201ENSMUST00000182329 1000 ntBASIC9.01□□□□□ -0.97
Trim35Q8C006 Gm27676-201ENSMUST00000183669 61 ntBASIC9.01□□□□□ -0.97
Trim35Q8C006 Mir6354-201ENSMUST00000184979 116 ntBASIC9.01□□□□□ -0.97
Trim35Q8C006 Gm28593-201ENSMUST00000190989 2170 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
Trim35Q8C006 Gm33962-202ENSMUST00000205195 630 ntTSL 5 BASIC9.01□□□□□ -0.97
Trim35Q8C006 Gm44658-201ENSMUST00000207965 637 ntBASIC9.01□□□□□ -0.97
Trim35Q8C006 Olfr374-201ENSMUST00000209675 1053 ntAPPRIS P1 BASIC9.01□□□□□ -0.97
Trim35Q8C006 Gm45620-201ENSMUST00000209980 468 ntTSL 3 BASIC9.01□□□□□ -0.97
Trim35Q8C006 AC152415.1-201ENSMUST00000213320 440 ntBASIC9.01□□□□□ -0.97
Trim35Q8C006 AC124346.1-201ENSMUST00000218539 364 ntBASIC9.01□□□□□ -0.97
Trim35Q8C006 4930529N20Rik-201ENSMUST00000220538 639 ntTSL 3 BASIC9.01□□□□□ -0.97
Trim35Q8C006 CT009536.1-201ENSMUST00000223774 2151 ntBASIC9.01□□□□□ -0.97
Trim35Q8C006 Lgals9-201ENSMUST00000073001 1074 ntAPPRIS ALT2 TSL 5 BASIC9.01□□□□□ -0.97
Trim35Q8C006 Ube2c-202ENSMUST00000088248 967 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Trim35Q8C006 Gm9104-201ENSMUST00000095268 483 ntBASIC9.01□□□□□ -0.97
Trim35Q8C006 Cyp4v3-201ENSMUST00000095328 3808 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Trim35Q8C006 Nfyc-202ENSMUST00000097906 1008 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Trim35Q8C006 Pet2-201ENSMUST00000113959 4183 ntAPPRIS P1 TSL 5 BASIC9.01□□□□□ -0.97
Trim35Q8C006 Pet2-202ENSMUST00000113960 4182 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Trim35Q8C006 Sycp1-201ENSMUST00000029448 3437 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Trim35Q8C006 Zfp942-202ENSMUST00000091879 3265 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Trim35Q8C006 Mefv-201ENSMUST00000023180 3126 ntAPPRIS P3 TSL 1 (best) BASIC9.01□□□□□ -0.97
Trim35Q8C006 C87436-203ENSMUST00000113700 2523 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Trim35Q8C006 Plat-201ENSMUST00000033941 2525 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Trim35Q8C006 Synj2-209ENSMUST00000115790 4808 ntAPPRIS ALT2 TSL 5 BASIC9.01□□□□□ -0.97
Trim35Q8C006 Atrip-205ENSMUST00000161521 2381 ntAPPRIS ALT2 TSL 5 BASIC9.01□□□□□ -0.97
Trim35Q8C006 Duxbl3-202ENSMUST00000112340 2248 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
Trim35Q8C006 Duxbl2-202ENSMUST00000172038 2248 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
Trim35Q8C006 Plekha5-206ENSMUST00000203774 1912 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
Trim35Q8C006 AC174459.1-201ENSMUST00000224476 1943 ntBASIC9.01□□□□□ -0.97
Trim35Q8C006 Actr2-201ENSMUST00000000137 3631 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Trim35Q8C006 Tifab-201ENSMUST00000169652 3349 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Trim35Q8C006 Fer-201ENSMUST00000000129 3008 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Trim35Q8C006 Lnpk-202ENSMUST00000102676 1468 ntAPPRIS ALT2 TSL 1 (best) BASIC9.01□□□□□ -0.97
Trim35Q8C006 Dlk1-206ENSMUST00000109846 4106 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
Trim35Q8C006 Rpp14-201ENSMUST00000023924 2401 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
Trim35Q8C006 Aasdh-201ENSMUST00000069709 3381 ntAPPRIS P1 TSL 5 BASIC9.01□□□□□ -0.97
Trim35Q8C006 Ncaph2-201ENSMUST00000036987 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC9.01□□□□□ -0.97
Retrieved 100 of 76,532 protein–RNA pairs in 124.7 ms