Protein–RNA interactions for Protein: Q8BZT2

Sh3rf2, Putative E3 ubiquitin-protein ligase SH3RF2, mousemouse

Predictions only

Length 735 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf2Q8BZT2 Gm37152-201ENSMUST00000193369 1175 ntBASIC6.31□□□□□ -1.4
Sh3rf2Q8BZT2 4933424M12Rik-202ENSMUST00000203451 1100 ntTSL 5 BASIC6.31□□□□□ -1.4
Sh3rf2Q8BZT2 Gm44061-201ENSMUST00000203962 1195 ntBASIC6.31□□□□□ -1.4
Sh3rf2Q8BZT2 Gm44296-201ENSMUST00000204689 681 ntTSL 3 BASIC6.31□□□□□ -1.4
Sh3rf2Q8BZT2 Gm44930-201ENSMUST00000207545 489 ntTSL 5 BASIC6.31□□□□□ -1.4
Sh3rf2Q8BZT2 Gm34350-201ENSMUST00000208898 481 ntTSL 5 BASIC6.31□□□□□ -1.4
Sh3rf2Q8BZT2 Gm45514-201ENSMUST00000211531 689 ntBASIC6.31□□□□□ -1.4
Sh3rf2Q8BZT2 Gm45850-201ENSMUST00000212536 338 ntBASIC6.31□□□□□ -1.4
Sh3rf2Q8BZT2 AC118476.1-201ENSMUST00000216237 349 ntTSL 3 BASIC6.31□□□□□ -1.4
Sh3rf2Q8BZT2 Gm18405-201ENSMUST00000220743 511 ntBASIC6.31□□□□□ -1.4
Sh3rf2Q8BZT2 CT030175.1-201ENSMUST00000220822 408 ntBASIC6.31□□□□□ -1.4
Sh3rf2Q8BZT2 AC172989.1-201ENSMUST00000226387 513 ntBASIC6.31□□□□□ -1.4
Sh3rf2Q8BZT2 AC115357.1-201ENSMUST00000227575 466 ntBASIC6.31□□□□□ -1.4
Sh3rf2Q8BZT2 Tmed6-201ENSMUST00000034393 871 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
Sh3rf2Q8BZT2 Gm26437-201ENSMUST00000082595 105 ntBASIC6.31□□□□□ -1.4
Sh3rf2Q8BZT2 Gm22300-201ENSMUST00000082661 126 ntBASIC6.31□□□□□ -1.4
Sh3rf2Q8BZT2 Ndufaf4-201ENSMUST00000029925 3632 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
Sh3rf2Q8BZT2 Lrrc37a-201ENSMUST00000153273 9647 ntAPPRIS P1 TSL 5 BASIC6.31□□□□□ -1.4
Sh3rf2Q8BZT2 Zmat4-201ENSMUST00000042352 4182 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
Sh3rf2Q8BZT2 Olfr1340-204ENSMUST00000217334 2001 ntAPPRIS P1 TSL 3 BASIC6.31□□□□□ -1.4
Sh3rf2Q8BZT2 N4bp2-204ENSMUST00000201489 9055 ntAPPRIS P1 TSL 5 BASIC6.31□□□□□ -1.4
Sh3rf2Q8BZT2 Scoc-201ENSMUST00000081506 1791 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
Sh3rf2Q8BZT2 Vps50-201ENSMUST00000001412 3788 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
Sh3rf2Q8BZT2 Nmrk1-201ENSMUST00000042392 1357 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
Sh3rf2Q8BZT2 Zscan4d-201ENSMUST00000067210 2272 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
Sh3rf2Q8BZT2 Gm9602-201ENSMUST00000163325 2062 ntAPPRIS P5 TSL 1 (best) BASIC6.3□□□□□ -1.4
Sh3rf2Q8BZT2 Gm8356-201ENSMUST00000163636 2062 ntAPPRIS P5 TSL 5 BASIC6.3□□□□□ -1.4
Sh3rf2Q8BZT2 Fmn1-201ENSMUST00000081349 4235 ntAPPRIS ALT2 TSL 1 (best) BASIC6.3□□□□□ -1.4
Sh3rf2Q8BZT2 Csn2-206ENSMUST00000197422 1329 ntAPPRIS P3 TSL 1 (best) BASIC6.3□□□□□ -1.4
Sh3rf2Q8BZT2 Uevld-201ENSMUST00000094398 4616 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
Sh3rf2Q8BZT2 Gm44046-201ENSMUST00000203145 2678 ntBASIC6.3□□□□□ -1.4
Sh3rf2Q8BZT2 Cyp2j13-201ENSMUST00000030305 4374 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
Sh3rf2Q8BZT2 Gm18508-201ENSMUST00000215790 1642 ntBASIC6.3□□□□□ -1.4
Sh3rf2Q8BZT2 Ubtfl1-201ENSMUST00000098973 1649 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
Sh3rf2Q8BZT2 Gm10378-201ENSMUST00000100696 429 ntAPPRIS P1 TSL 5 BASIC6.3□□□□□ -1.4
Sh3rf2Q8BZT2 Gm26143-201ENSMUST00000104480 108 ntBASIC6.3□□□□□ -1.4
Sh3rf2Q8BZT2 Gm14331-201ENSMUST00000120396 409 ntBASIC6.3□□□□□ -1.4
Sh3rf2Q8BZT2 Gm14237-201ENSMUST00000122080 430 ntBASIC6.3□□□□□ -1.4
Sh3rf2Q8BZT2 Tctex1d1-203ENSMUST00000125417 859 ntAPPRIS ALT2 TSL 5 BASIC6.3□□□□□ -1.4
Sh3rf2Q8BZT2 Gm9428-201ENSMUST00000127214 769 ntBASIC6.3□□□□□ -1.4
Sh3rf2Q8BZT2 Gm3076-201ENSMUST00000161613 451 ntBASIC6.3□□□□□ -1.4
Sh3rf2Q8BZT2 Gm7152-201ENSMUST00000163570 605 ntBASIC6.3□□□□□ -1.4
Sh3rf2Q8BZT2 Gm5795-202ENSMUST00000166275 612 ntTSL 5 BASIC6.3□□□□□ -1.4
Sh3rf2Q8BZT2 Gm8279-203ENSMUST00000170040 612 ntTSL 5 BASIC6.3□□□□□ -1.4
Sh3rf2Q8BZT2 Gm9597-201ENSMUST00000171913 602 ntBASIC6.3□□□□□ -1.4
Sh3rf2Q8BZT2 Gm10413-202ENSMUST00000177913 612 ntAPPRIS ALT2 TSL 2 BASIC6.3□□□□□ -1.4
Sh3rf2Q8BZT2 Gm3424-202ENSMUST00000178418 618 ntAPPRIS ALT2 TSL 5 BASIC6.3□□□□□ -1.4
Sh3rf2Q8BZT2 Gm3187-201ENSMUST00000178429 618 ntAPPRIS ALT2 TSL 5 BASIC6.3□□□□□ -1.4
Sh3rf2Q8BZT2 Gm10338-202ENSMUST00000178623 612 ntTSL 5 BASIC6.3□□□□□ -1.4
Sh3rf2Q8BZT2 Gm8246-201ENSMUST00000179411 618 ntAPPRIS ALT2 TSL 5 BASIC6.3□□□□□ -1.4
Sh3rf2Q8BZT2 Gm3012-202ENSMUST00000179486 612 ntAPPRIS ALT2 TSL 2 BASIC6.3□□□□□ -1.4
Sh3rf2Q8BZT2 Gm7952-201ENSMUST00000180540 984 ntBASIC6.3□□□□□ -1.4
Sh3rf2Q8BZT2 Gm27468-201ENSMUST00000183577 106 ntBASIC6.3□□□□□ -1.4
Sh3rf2Q8BZT2 Gm29277-201ENSMUST00000185226 602 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
Sh3rf2Q8BZT2 Gm29089-201ENSMUST00000186209 602 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
Sh3rf2Q8BZT2 Gm28783-201ENSMUST00000188872 359 ntTSL 5 BASIC6.3□□□□□ -1.4
Sh3rf2Q8BZT2 2310008N11Rik-201ENSMUST00000189978 568 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
Sh3rf2Q8BZT2 Gm43688-201ENSMUST00000202249 310 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
Sh3rf2Q8BZT2 Gm44206-201ENSMUST00000203044 592 ntTSL 5 BASIC6.3□□□□□ -1.4
Sh3rf2Q8BZT2 Gm44038-201ENSMUST00000203952 889 ntBASIC6.3□□□□□ -1.4
Sh3rf2Q8BZT2 Gm19182-201ENSMUST00000207139 577 ntBASIC6.3□□□□□ -1.4
Sh3rf2Q8BZT2 2310008N11Rik-203ENSMUST00000210732 601 ntTSL 5 BASIC6.3□□□□□ -1.4
Sh3rf2Q8BZT2 Olfr1092-ps1-201ENSMUST00000216544 398 ntBASIC6.3□□□□□ -1.4
Sh3rf2Q8BZT2 AC160061.1-201ENSMUST00000217766 533 ntTSL 3 BASIC6.3□□□□□ -1.4
Sh3rf2Q8BZT2 AC121804.1-201ENSMUST00000221016 394 ntBASIC6.3□□□□□ -1.4
Sh3rf2Q8BZT2 CT025598.1-201ENSMUST00000225140 427 ntBASIC6.3□□□□□ -1.4
Sh3rf2Q8BZT2 Gstk1-201ENSMUST00000031897 930 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
Sh3rf2Q8BZT2 Vmn1r179-201ENSMUST00000049819 972 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
Sh3rf2Q8BZT2 Olfr410-201ENSMUST00000052254 948 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
Sh3rf2Q8BZT2 Gm17728-201ENSMUST00000076982 399 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
Sh3rf2Q8BZT2 Vmn1r183-201ENSMUST00000086012 918 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
Sh3rf2Q8BZT2 Gm7995-201ENSMUST00000089789 429 ntAPPRIS P1 TSL 5 BASIC6.3□□□□□ -1.4
Sh3rf2Q8BZT2 Wnk1-218ENSMUST00000161512 1426 ntBASIC6.3□□□□□ -1.4
Sh3rf2Q8BZT2 Gm18878-201ENSMUST00000223071 1443 ntBASIC6.3□□□□□ -1.4
Sh3rf2Q8BZT2 AW554918-208ENSMUST00000165400 5351 ntAPPRIS ALT2 TSL 5 BASIC6.3□□□□□ -1.4
Sh3rf2Q8BZT2 AW554918-202ENSMUST00000097643 5351 ntAPPRIS ALT2 TSL 5 BASIC6.3□□□□□ -1.4
Sh3rf2Q8BZT2 Pnpla8-202ENSMUST00000122902 2728 ntAPPRIS ALT2 TSL 1 (best) BASIC6.3□□□□□ -1.4
Sh3rf2Q8BZT2 C530050E15Rik-201ENSMUST00000181373 3837 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
Sh3rf2Q8BZT2 Gm19667-201ENSMUST00000188984 3334 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
Sh3rf2Q8BZT2 Gm2223-201ENSMUST00000112099 1350 ntBASIC6.3□□□□□ -1.4
Sh3rf2Q8BZT2 AL607131.1-201ENSMUST00000222575 1835 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
Sh3rf2Q8BZT2 Gm9894-201ENSMUST00000171257 2904 ntBASIC6.29□□□□□ -1.4
Sh3rf2Q8BZT2 Pja2-202ENSMUST00000024889 4345 ntAPPRIS ALT2 TSL 1 (best) BASIC6.29□□□□□ -1.4
Sh3rf2Q8BZT2 9430053O09Rik-201ENSMUST00000192654 2570 ntBASIC6.29□□□□□ -1.4
Sh3rf2Q8BZT2 Gm38276-201ENSMUST00000192446 1343 ntBASIC6.29□□□□□ -1.4
Sh3rf2Q8BZT2 Coro2a-203ENSMUST00000107757 4124 ntAPPRIS ALT2 TSL 1 (best) BASIC6.29□□□□□ -1.4
Sh3rf2Q8BZT2 Gm43190-201ENSMUST00000187850 1779 ntBASIC6.29□□□□□ -1.4
Sh3rf2Q8BZT2 Fut9-201ENSMUST00000084770 12134 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
Sh3rf2Q8BZT2 Gm13870-201ENSMUST00000117214 1023 ntBASIC6.29□□□□□ -1.4
Sh3rf2Q8BZT2 Gm12099-201ENSMUST00000118660 750 ntBASIC6.29□□□□□ -1.4
Sh3rf2Q8BZT2 Gm11976-201ENSMUST00000119236 295 ntBASIC6.29□□□□□ -1.4
Sh3rf2Q8BZT2 Gm5387-201ENSMUST00000119776 857 ntBASIC6.29□□□□□ -1.4
Sh3rf2Q8BZT2 Gm13998-201ENSMUST00000120952 335 ntBASIC6.29□□□□□ -1.4
Sh3rf2Q8BZT2 Gm14840-201ENSMUST00000122135 594 ntBASIC6.29□□□□□ -1.4
Sh3rf2Q8BZT2 Gm22276-201ENSMUST00000122469 129 ntBASIC6.29□□□□□ -1.4
Sh3rf2Q8BZT2 Gm12670-201ENSMUST00000123606 576 ntTSL 2 BASIC6.29□□□□□ -1.4
Sh3rf2Q8BZT2 Gm5834-201ENSMUST00000126680 1026 ntBASIC6.29□□□□□ -1.4
Sh3rf2Q8BZT2 Cdh7-203ENSMUST00000129923 1409 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
Sh3rf2Q8BZT2 Gm13417-201ENSMUST00000155475 533 ntTSL 2 BASIC6.29□□□□□ -1.4
Sh3rf2Q8BZT2 Gm8159-201ENSMUST00000163738 997 ntAPPRIS ALT2 TSL 5 BASIC6.29□□□□□ -1.4
Retrieved 100 of 76,532 protein–RNA pairs in 60 ms