Protein–RNA interactions for Protein: Q60649

Clpb, Caseinolytic peptidase B protein homolog, mousemouse

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClpbQ60649 Abca15-202ENSMUST00000121265 5335 ntAPPRIS ALT2 TSL 5 BASIC6.01□□□□□ -1.45
ClpbQ60649 Gm18796-201ENSMUST00000190440 1767 ntBASIC6.01□□□□□ -1.45
ClpbQ60649 Abca15-201ENSMUST00000076272 5335 ntAPPRIS P2 TSL 1 (best) BASIC6.01□□□□□ -1.45
ClpbQ60649 Car5b-201ENSMUST00000033739 3436 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
ClpbQ60649 Tsga10-201ENSMUST00000041815 3400 ntAPPRIS P3 TSL 1 (best) BASIC6.01□□□□□ -1.45
ClpbQ60649 Gm37056-201ENSMUST00000192141 1865 ntBASIC6.01□□□□□ -1.45
ClpbQ60649 Atp6ap1l-201ENSMUST00000109541 1186 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
ClpbQ60649 Gm11462-201ENSMUST00000117749 562 ntBASIC6.01□□□□□ -1.45
ClpbQ60649 Mup9-202ENSMUST00000118759 909 ntAPPRIS ALT2 TSL 5 BASIC6.01□□□□□ -1.45
ClpbQ60649 Gm4910-201ENSMUST00000119605 366 ntBASIC6.01□□□□□ -1.45
ClpbQ60649 Gm13642-201ENSMUST00000121697 381 ntBASIC6.01□□□□□ -1.45
ClpbQ60649 Gm14840-201ENSMUST00000122135 594 ntBASIC6.01□□□□□ -1.45
ClpbQ60649 Mup9-204ENSMUST00000122381 864 ntAPPRIS P2 TSL 2 BASIC6.01□□□□□ -1.45
ClpbQ60649 Fthl17-ps3-201ENSMUST00000126259 513 ntBASIC6.01□□□□□ -1.45
ClpbQ60649 Grip1os1-202ENSMUST00000135940 1192 ntTSL 5 BASIC6.01□□□□□ -1.45
ClpbQ60649 Gm15473-201ENSMUST00000140746 1179 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
ClpbQ60649 Gm15503-201ENSMUST00000141541 449 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
ClpbQ60649 AI662270-203ENSMUST00000145461 592 ntTSL 5 BASIC6.01□□□□□ -1.45
ClpbQ60649 Gm22311-201ENSMUST00000158006 110 ntBASIC6.01□□□□□ -1.45
ClpbQ60649 Gm8159-201ENSMUST00000163738 997 ntAPPRIS ALT2 TSL 5 BASIC6.01□□□□□ -1.45
ClpbQ60649 Gm8297-201ENSMUST00000171636 997 ntAPPRIS ALT2 TSL 5 BASIC6.01□□□□□ -1.45
ClpbQ60649 Gm17096-201ENSMUST00000172037 733 ntTSL 5 BASIC6.01□□□□□ -1.45
ClpbQ60649 Ccl27b-201ENSMUST00000177785 425 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
ClpbQ60649 Lemd1-209ENSMUST00000191418 726 ntAPPRIS ALT2 TSL 2 BASIC6.01□□□□□ -1.45
ClpbQ60649 Gm37974-201ENSMUST00000193668 220 ntTSL 3 BASIC6.01□□□□□ -1.45
ClpbQ60649 9430087J23Rik-201ENSMUST00000195414 1152 ntBASIC6.01□□□□□ -1.45
ClpbQ60649 Gm5694-201ENSMUST00000195648 641 ntBASIC6.01□□□□□ -1.45
ClpbQ60649 Gm43354-201ENSMUST00000196862 346 ntBASIC6.01□□□□□ -1.45
ClpbQ60649 Gm43241-201ENSMUST00000198375 364 ntTSL 3 BASIC6.01□□□□□ -1.45
ClpbQ60649 Gm6366-201ENSMUST00000198766 826 ntBASIC6.01□□□□□ -1.45
ClpbQ60649 Gm43762-201ENSMUST00000201521 295 ntBASIC6.01□□□□□ -1.45
ClpbQ60649 Gm7492-201ENSMUST00000201745 725 ntBASIC6.01□□□□□ -1.45
ClpbQ60649 Mitf-208ENSMUST00000203938 1074 ntTSL 5 BASIC6.01□□□□□ -1.45
ClpbQ60649 1600020E01Rik-208ENSMUST00000205028 329 ntTSL 5 BASIC6.01□□□□□ -1.45
ClpbQ60649 Gm39129-201ENSMUST00000207553 806 ntTSL 5 BASIC6.01□□□□□ -1.45
ClpbQ60649 Gm45070-201ENSMUST00000208100 246 ntBASIC6.01□□□□□ -1.45
ClpbQ60649 Gm8679-201ENSMUST00000210651 1036 ntBASIC6.01□□□□□ -1.45
ClpbQ60649 Gm34853-201ENSMUST00000211662 509 ntTSL 5 BASIC6.01□□□□□ -1.45
ClpbQ60649 Gm20163-201ENSMUST00000212232 494 ntTSL 3 BASIC6.01□□□□□ -1.45
ClpbQ60649 4930567H12Rik-202ENSMUST00000212512 766 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
ClpbQ60649 Olfr1077-ps1-201ENSMUST00000213225 1212 ntAPPRIS P1 TSL 3 BASIC6.01□□□□□ -1.45
ClpbQ60649 AC161250.1-201ENSMUST00000213426 1111 ntBASIC6.01□□□□□ -1.45
ClpbQ60649 4933404K13Rik-201ENSMUST00000214651 937 ntTSL 3 BASIC6.01□□□□□ -1.45
ClpbQ60649 Gm18789-201ENSMUST00000216115 550 ntBASIC6.01□□□□□ -1.45
ClpbQ60649 Gm18103-201ENSMUST00000216621 779 ntBASIC6.01□□□□□ -1.45
ClpbQ60649 AC153532.1-201ENSMUST00000218126 1111 ntBASIC6.01□□□□□ -1.45
ClpbQ60649 Gm34165-201ENSMUST00000222012 1174 ntBASIC6.01□□□□□ -1.45
ClpbQ60649 Gm17872-201ENSMUST00000222550 532 ntBASIC6.01□□□□□ -1.45
ClpbQ60649 1700019A02Rik-201ENSMUST00000072235 646 ntAPPRIS P2 TSL 1 (best) BASIC6.01□□□□□ -1.45
ClpbQ60649 Mup20-201ENSMUST00000074018 928 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
ClpbQ60649 Gm23058-201ENSMUST00000093703 107 ntBASIC6.01□□□□□ -1.45
ClpbQ60649 Raet1d-201ENSMUST00000095795 1271 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
ClpbQ60649 Mup18-201ENSMUST00000098040 930 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
ClpbQ60649 Mup11-202ENSMUST00000098046 930 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
ClpbQ60649 Mup10-201ENSMUST00000098047 927 ntAPPRIS P1 TSL 2 BASIC6.01□□□□□ -1.45
ClpbQ60649 Acad11-202ENSMUST00000120854 3108 ntTSL 5 BASIC6.01□□□□□ -1.45
ClpbQ60649 Heph-203ENSMUST00000113838 4611 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
ClpbQ60649 4930547M16Rik-201ENSMUST00000181590 2400 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
ClpbQ60649 Gm20644-201ENSMUST00000176721 2063 ntBASIC6.01□□□□□ -1.45
ClpbQ60649 Olfr430-203ENSMUST00000214390 3300 ntAPPRIS P1 TSL 5 BASIC6.01□□□□□ -1.45
ClpbQ60649 Vmn1r34-207ENSMUST00000228647 2979 ntAPPRIS P1 BASIC6.01□□□□□ -1.45
ClpbQ60649 Ceacam2-202ENSMUST00000064862 3087 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
ClpbQ60649 Olfr994-204ENSMUST00000217218 1460 ntAPPRIS P1 TSL 3 BASIC6.01□□□□□ -1.45
ClpbQ60649 Themis-203ENSMUST00000105516 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC6.01□□□□□ -1.45
ClpbQ60649 Zfp27-202ENSMUST00000159920 3381 ntAPPRIS P1 TSL 5 BASIC6.01□□□□□ -1.45
ClpbQ60649 Trim2-204ENSMUST00000107692 7161 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
ClpbQ60649 Nxf7-202ENSMUST00000113163 2233 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
ClpbQ60649 Pde4b-207ENSMUST00000106908 4304 ntAPPRIS P2 TSL 1 (best) BASIC6.01□□□□□ -1.45
ClpbQ60649 Olfr1381-202ENSMUST00000213256 4954 ntAPPRIS P1 TSL 5 BASIC6□□□□□ -1.45
ClpbQ60649 Gm43216-201ENSMUST00000196295 1333 ntBASIC6□□□□□ -1.45
ClpbQ60649 Gm43363-201ENSMUST00000201590 2647 ntBASIC6□□□□□ -1.45
ClpbQ60649 Fcrl5-202ENSMUST00000166297 1527 ntAPPRIS ALT2 TSL 5 BASIC6□□□□□ -1.45
ClpbQ60649 Ncoa7-212ENSMUST00000217644 2256 ntTSL 1 (best) BASIC6□□□□□ -1.45
ClpbQ60649 Zscan4e-201ENSMUST00000166753 1722 ntAPPRIS P1 TSL 5 BASIC6□□□□□ -1.45
ClpbQ60649 6330410L21Rik-201ENSMUST00000199846 3871 ntTSL 1 (best) BASIC6□□□□□ -1.45
ClpbQ60649 Nlrp5-201ENSMUST00000015866 3508 ntAPPRIS P4 TSL 1 (best) BASIC6□□□□□ -1.45
ClpbQ60649 Cfap70-202ENSMUST00000022349 3549 ntAPPRIS ALT2 TSL 1 (best) BASIC6□□□□□ -1.45
ClpbQ60649 Gm38257-201ENSMUST00000195881 2761 ntBASIC6□□□□□ -1.45
ClpbQ60649 Vmn1r52-206ENSMUST00000228385 2769 ntBASIC6□□□□□ -1.45
ClpbQ60649 Gm17751-201ENSMUST00000189132 2004 ntTSL 1 (best) BASIC6□□□□□ -1.45
ClpbQ60649 Trbv13-3-201ENSMUST00000103271 340 ntAPPRIS P1 BASIC6□□□□□ -1.45
ClpbQ60649 Gm23311-201ENSMUST00000104152 134 ntBASIC6□□□□□ -1.45
ClpbQ60649 Gm24989-201ENSMUST00000104461 88 ntBASIC6□□□□□ -1.45
ClpbQ60649 Cd200r3-205ENSMUST00000114613 950 ntAPPRIS ALT2 TSL 1 (best) BASIC6□□□□□ -1.45
ClpbQ60649 Gm11256-201ENSMUST00000118109 829 ntBASIC6□□□□□ -1.45
ClpbQ60649 Gm14356-201ENSMUST00000118322 869 ntBASIC6□□□□□ -1.45
ClpbQ60649 Gm12985-201ENSMUST00000118376 183 ntBASIC6□□□□□ -1.45
ClpbQ60649 Gm14375-201ENSMUST00000119490 855 ntBASIC6□□□□□ -1.45
ClpbQ60649 Gm7212-201ENSMUST00000120817 348 ntBASIC6□□□□□ -1.45
ClpbQ60649 Gm6977-201ENSMUST00000121568 512 ntBASIC6□□□□□ -1.45
ClpbQ60649 n-R5s48-201ENSMUST00000122482 110 ntBASIC6□□□□□ -1.45
ClpbQ60649 Gm23430-201ENSMUST00000122490 314 ntBASIC6□□□□□ -1.45
ClpbQ60649 3100003L05Rik-201ENSMUST00000130240 664 ntTSL 1 (best) BASIC6□□□□□ -1.45
ClpbQ60649 Gm13708-201ENSMUST00000145170 390 ntTSL 5 BASIC6□□□□□ -1.45
ClpbQ60649 Gm3159-201ENSMUST00000164038 997 ntAPPRIS ALT2 TSL 5 BASIC6□□□□□ -1.45
ClpbQ60649 Gm3127-201ENSMUST00000167839 997 ntAPPRIS ALT2 TSL 5 BASIC6□□□□□ -1.45
ClpbQ60649 Gm18006-201ENSMUST00000177411 662 ntBASIC6□□□□□ -1.45
ClpbQ60649 Gm26557-201ENSMUST00000180756 493 ntBASIC6□□□□□ -1.45
ClpbQ60649 Gm9658-201ENSMUST00000182757 1012 ntBASIC6□□□□□ -1.45
ClpbQ60649 Gm29082-201ENSMUST00000185207 448 ntTSL 5 BASIC6□□□□□ -1.45
Retrieved 100 of 76,532 protein–RNA pairs in 75.7 ms