Protein–RNA interactions for Protein: Q3TP92

Ctdnep1, CTD nuclear envelope phosphatase 1, mousemouse

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ctdnep1Q3TP92 1700019D03Rik-203ENSMUST00000114493 3619 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
Ctdnep1Q3TP92 Gm28928-201ENSMUST00000187286 1443 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
Ctdnep1Q3TP92 Gm2245-201ENSMUST00000160698 3376 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
Ctdnep1Q3TP92 Gm38218-201ENSMUST00000193555 4689 ntBASIC6.83□□□□□ -1.32
Ctdnep1Q3TP92 Gm3259-202ENSMUST00000160045 1847 ntAPPRIS ALT2 TSL 1 (best) BASIC6.83□□□□□ -1.32
Ctdnep1Q3TP92 C87414-201ENSMUST00000076321 1847 ntAPPRIS ALT2 TSL 1 (best) BASIC6.83□□□□□ -1.32
Ctdnep1Q3TP92 A830008E24Rik-202ENSMUST00000190485 5226 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
Ctdnep1Q3TP92 Gm156-202ENSMUST00000118532 2000 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
Ctdnep1Q3TP92 Vmn2r121-201ENSMUST00000094491 3062 ntAPPRIS P1 TSL 5 BASIC6.82□□□□□ -1.32
Ctdnep1Q3TP92 Stx19-201ENSMUST00000055557 2812 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
Ctdnep1Q3TP92 Rfc1-203ENSMUST00000203581 4689 ntAPPRIS ALT2 TSL 1 (best) BASIC6.82□□□□□ -1.32
Ctdnep1Q3TP92 Gm8750-201ENSMUST00000173278 1537 ntBASIC6.82□□□□□ -1.32
Ctdnep1Q3TP92 Gm7155-201ENSMUST00000121143 1671 ntBASIC6.82□□□□□ -1.32
Ctdnep1Q3TP92 Olfr720-204ENSMUST00000217642 4832 ntAPPRIS P1 TSL 5 BASIC6.82□□□□□ -1.32
Ctdnep1Q3TP92 Gm15400-201ENSMUST00000118944 601 ntBASIC6.82□□□□□ -1.32
Ctdnep1Q3TP92 Gm15237-201ENSMUST00000122104 469 ntBASIC6.82□□□□□ -1.32
Ctdnep1Q3TP92 Gm15300-201ENSMUST00000122324 279 ntBASIC6.82□□□□□ -1.32
Ctdnep1Q3TP92 Platr28-201ENSMUST00000133824 1294 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
Ctdnep1Q3TP92 Gm25826-201ENSMUST00000157090 137 ntBASIC6.82□□□□□ -1.32
Ctdnep1Q3TP92 Ptpn4-204ENSMUST00000163621 431 ntTSL 3 BASIC6.82□□□□□ -1.32
Ctdnep1Q3TP92 Vis1-201ENSMUST00000183957 201 ntBASIC6.82□□□□□ -1.32
Ctdnep1Q3TP92 Olfr1025-ps1-201ENSMUST00000188749 921 ntBASIC6.82□□□□□ -1.32
Ctdnep1Q3TP92 Gm37177-201ENSMUST00000193768 417 ntBASIC6.82□□□□□ -1.32
Ctdnep1Q3TP92 9430087J23Rik-201ENSMUST00000195414 1152 ntBASIC6.82□□□□□ -1.32
Ctdnep1Q3TP92 Gm8930-201ENSMUST00000201693 768 ntBASIC6.82□□□□□ -1.32
Ctdnep1Q3TP92 2900076G11Rik-201ENSMUST00000202297 631 ntBASIC6.82□□□□□ -1.32
Ctdnep1Q3TP92 Gm44768-201ENSMUST00000205719 393 ntBASIC6.82□□□□□ -1.32
Ctdnep1Q3TP92 Gm18329-201ENSMUST00000215832 589 ntBASIC6.82□□□□□ -1.32
Ctdnep1Q3TP92 AC124595.1-201ENSMUST00000221799 646 ntTSL 3 BASIC6.82□□□□□ -1.32
Ctdnep1Q3TP92 Gm31063-201ENSMUST00000222636 580 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
Ctdnep1Q3TP92 1700028P14Rik-201ENSMUST00000035849 868 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
Ctdnep1Q3TP92 4930550C14Rik-201ENSMUST00000005262 1237 ntAPPRIS P2 TSL 1 (best) BASIC6.82□□□□□ -1.32
Ctdnep1Q3TP92 Olfr481-201ENSMUST00000067143 939 ntAPPRIS P1 BASIC6.82□□□□□ -1.32
Ctdnep1Q3TP92 Gm23737-201ENSMUST00000082547 159 ntBASIC6.82□□□□□ -1.32
Ctdnep1Q3TP92 Gml-201ENSMUST00000096400 957 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
Ctdnep1Q3TP92 Apol10a-201ENSMUST00000060551 3033 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
Ctdnep1Q3TP92 Gm37342-201ENSMUST00000194588 4965 ntBASIC6.82□□□□□ -1.32
Ctdnep1Q3TP92 2700049A03Rik-201ENSMUST00000045907 4507 ntAPPRIS ALT2 TSL 1 (best) BASIC6.82□□□□□ -1.32
Ctdnep1Q3TP92 Ythdc1-201ENSMUST00000038384 2960 ntAPPRIS P3 TSL 5 BASIC6.82□□□□□ -1.32
Ctdnep1Q3TP92 Gm37553-201ENSMUST00000194135 1602 ntBASIC6.82□□□□□ -1.32
Ctdnep1Q3TP92 B130034C11Rik-201ENSMUST00000175717 1401 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
Ctdnep1Q3TP92 Gm37769-201ENSMUST00000193753 2369 ntBASIC6.82□□□□□ -1.32
Ctdnep1Q3TP92 Pramel3-201ENSMUST00000113176 3673 ntAPPRIS P2 TSL 1 (best) BASIC6.82□□□□□ -1.32
Ctdnep1Q3TP92 Gm44586-201ENSMUST00000207166 2737 ntBASIC6.82□□□□□ -1.32
Ctdnep1Q3TP92 Ftx-205ENSMUST00000156211 4215 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
Ctdnep1Q3TP92 Zfp59-202ENSMUST00000205701 3437 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
Ctdnep1Q3TP92 Map2-205ENSMUST00000114015 5440 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
Ctdnep1Q3TP92 D5Ertd577e-201ENSMUST00000094593 2462 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
Ctdnep1Q3TP92 Krit1-202ENSMUST00000171023 5582 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
Ctdnep1Q3TP92 Hdac9-205ENSMUST00000209902 7940 ntAPPRIS ALT2 TSL 5 BASIC6.82□□□□□ -1.32
Ctdnep1Q3TP92 Ccl28-201ENSMUST00000099241 3740 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
Ctdnep1Q3TP92 Adgrb3-203ENSMUST00000126626 2953 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
Ctdnep1Q3TP92 Zfp825-203ENSMUST00000221173 1549 ntAPPRIS ALT2 TSL 3 BASIC6.81□□□□□ -1.32
Ctdnep1Q3TP92 Zfp9-201ENSMUST00000161170 3968 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
Ctdnep1Q3TP92 Ccr9-203ENSMUST00000166236 5197 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
Ctdnep1Q3TP92 Ceacam12-202ENSMUST00000108483 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC6.81□□□□□ -1.32
Ctdnep1Q3TP92 Zgrf1-201ENSMUST00000043108 7046 ntAPPRIS P1 TSL 5 BASIC6.81□□□□□ -1.32
Ctdnep1Q3TP92 Gm37775-201ENSMUST00000194120 2313 ntBASIC6.81□□□□□ -1.32
Ctdnep1Q3TP92 Il18rap-201ENSMUST00000027237 4889 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
Ctdnep1Q3TP92 Gm22371-201ENSMUST00000104588 130 ntBASIC6.81□□□□□ -1.32
Ctdnep1Q3TP92 Gm7658-201ENSMUST00000119064 1124 ntBASIC6.81□□□□□ -1.32
Ctdnep1Q3TP92 Gm26765-201ENSMUST00000180844 692 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
Ctdnep1Q3TP92 D630011A20Rik-201ENSMUST00000180858 500 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
Ctdnep1Q3TP92 Gm16833-202ENSMUST00000189204 672 ntTSL 2 BASIC6.81□□□□□ -1.32
Ctdnep1Q3TP92 Gm29282-201ENSMUST00000190720 473 ntTSL 5 BASIC6.81□□□□□ -1.32
Ctdnep1Q3TP92 Gm6631-201ENSMUST00000193699 559 ntBASIC6.81□□□□□ -1.32
Ctdnep1Q3TP92 Gm37341-201ENSMUST00000194680 371 ntBASIC6.81□□□□□ -1.32
Ctdnep1Q3TP92 Gm29736-201ENSMUST00000198189 385 ntBASIC6.81□□□□□ -1.32
Ctdnep1Q3TP92 4930519H02Rik-202ENSMUST00000198907 968 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
Ctdnep1Q3TP92 Gm42886-201ENSMUST00000199214 466 ntBASIC6.81□□□□□ -1.32
Ctdnep1Q3TP92 Rpl7-ps7-201ENSMUST00000200912 799 ntBASIC6.81□□□□□ -1.32
Ctdnep1Q3TP92 Gm20786-201ENSMUST00000212649 436 ntBASIC6.81□□□□□ -1.32
Ctdnep1Q3TP92 CT033754.1-201ENSMUST00000216941 531 ntTSL 3 BASIC6.81□□□□□ -1.32
Ctdnep1Q3TP92 Gm46332-202ENSMUST00000220320 516 ntTSL 3 BASIC6.81□□□□□ -1.32
Ctdnep1Q3TP92 Gm18413-201ENSMUST00000221573 655 ntBASIC6.81□□□□□ -1.32
Ctdnep1Q3TP92 Gm7240-202ENSMUST00000221961 353 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
Ctdnep1Q3TP92 AC131187.2-201ENSMUST00000223936 994 ntBASIC6.81□□□□□ -1.32
Ctdnep1Q3TP92 AC154718.1-201ENSMUST00000226676 250 ntBASIC6.81□□□□□ -1.32
Ctdnep1Q3TP92 4930591A17Rik-201ENSMUST00000041998 737 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
Ctdnep1Q3TP92 Olfr166-201ENSMUST00000074739 1040 ntAPPRIS P1 BASIC6.81□□□□□ -1.32
Ctdnep1Q3TP92 Bglap-201ENSMUST00000076048 440 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
Ctdnep1Q3TP92 AC154682.1-201ENSMUST00000225871 3124 ntAPPRIS P1 BASIC6.81□□□□□ -1.32
Ctdnep1Q3TP92 Olfr1381-202ENSMUST00000213256 4954 ntAPPRIS P1 TSL 5 BASIC6.81□□□□□ -1.32
Ctdnep1Q3TP92 Vmn2r34-201ENSMUST00000173459 3616 ntAPPRIS P1 TSL 5 BASIC6.81□□□□□ -1.32
Ctdnep1Q3TP92 Gm11885-201ENSMUST00000118473 1428 ntBASIC6.81□□□□□ -1.32
Ctdnep1Q3TP92 9330111N05Rik-201ENSMUST00000180409 1407 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
Ctdnep1Q3TP92 Psg28-201ENSMUST00000019291 1949 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
Ctdnep1Q3TP92 Olfr373-203ENSMUST00000215198 3923 ntAPPRIS P1 TSL 5 BASIC6.81□□□□□ -1.32
Ctdnep1Q3TP92 Syt4-201ENSMUST00000025110 3901 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
Ctdnep1Q3TP92 Gm43360-201ENSMUST00000197656 2887 ntBASIC6.81□□□□□ -1.32
Ctdnep1Q3TP92 Adgrg2-202ENSMUST00000112400 4682 ntAPPRIS P4 TSL 1 (best) BASIC6.81□□□□□ -1.32
Ctdnep1Q3TP92 4921539E11Rik-203ENSMUST00000168664 2356 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
Ctdnep1Q3TP92 D630030B08Rik-201ENSMUST00000202983 3479 ntBASIC6.81□□□□□ -1.32
Ctdnep1Q3TP92 Gm15713-201ENSMUST00000155900 1546 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
Ctdnep1Q3TP92 Il7-201ENSMUST00000168269 2307 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
Ctdnep1Q3TP92 Cdh17-202ENSMUST00000108303 3287 ntTSL 2 BASIC6.81□□□□□ -1.32
Ctdnep1Q3TP92 Vmn1r6-204ENSMUST00000227188 8185 ntAPPRIS ALT2 BASIC6.8□□□□□ -1.32
Ctdnep1Q3TP92 Maml2-203ENSMUST00000177755 2264 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
Ctdnep1Q3TP92 Ptprc-204ENSMUST00000182755 4611 ntAPPRIS ALT2 TSL 1 (best) BASIC6.8□□□□□ -1.32
Ctdnep1Q3TP92 AC156031.1-201ENSMUST00000217288 2555 ntBASIC6.8□□□□□ -1.32
Retrieved 100 of 76,532 protein–RNA pairs in 60.2 ms