Protein–RNA interactions for Protein: Q3TL54

Trim43a, Tripartite motif-containing protein 43A, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43aQ3TL54 Gm12442-201ENSMUST00000118372 338 ntBASIC6.41□□□□□ -1.38
Trim43aQ3TL54 Gm12677-201ENSMUST00000118668 426 ntBASIC6.41□□□□□ -1.38
Trim43aQ3TL54 Gm16152-201ENSMUST00000131663 872 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
Trim43aQ3TL54 Med9os-202ENSMUST00000139794 446 ntTSL 3 BASIC6.41□□□□□ -1.38
Trim43aQ3TL54 Gm21877-201ENSMUST00000185640 694 ntBASIC6.41□□□□□ -1.38
Trim43aQ3TL54 Gm28358-201ENSMUST00000187860 636 ntTSL 5 BASIC6.41□□□□□ -1.38
Trim43aQ3TL54 Gm29489-201ENSMUST00000188934 324 ntBASIC6.41□□□□□ -1.38
Trim43aQ3TL54 Gm37958-201ENSMUST00000193131 430 ntTSL 3 BASIC6.41□□□□□ -1.38
Trim43aQ3TL54 Gm38343-201ENSMUST00000195786 1060 ntTSL 5 BASIC6.41□□□□□ -1.38
Trim43aQ3TL54 Gm42716-201ENSMUST00000196003 680 ntTSL 5 BASIC6.41□□□□□ -1.38
Trim43aQ3TL54 Gm42776-201ENSMUST00000198031 406 ntBASIC6.41□□□□□ -1.38
Trim43aQ3TL54 Gm42461-201ENSMUST00000198627 1150 ntBASIC6.41□□□□□ -1.38
Trim43aQ3TL54 Gm43126-201ENSMUST00000201546 429 ntTSL 3 BASIC6.41□□□□□ -1.38
Trim43aQ3TL54 4930518I17Rik-201ENSMUST00000203902 656 ntBASIC6.41□□□□□ -1.38
Trim43aQ3TL54 Gm5886-202ENSMUST00000203957 522 ntBASIC6.41□□□□□ -1.38
Trim43aQ3TL54 Gm2788-207ENSMUST00000211055 1078 ntTSL 5 BASIC6.41□□□□□ -1.38
Trim43aQ3TL54 Gm45473-201ENSMUST00000211452 616 ntBASIC6.41□□□□□ -1.38
Trim43aQ3TL54 E330011O21Rik-208ENSMUST00000211650 1225 ntTSL 5 BASIC6.41□□□□□ -1.38
Trim43aQ3TL54 CT009748.2-201ENSMUST00000213828 1082 ntTSL 5 BASIC6.41□□□□□ -1.38
Trim43aQ3TL54 Gm32105-201ENSMUST00000218512 511 ntTSL 5 BASIC6.41□□□□□ -1.38
Trim43aQ3TL54 Gm7413-201ENSMUST00000219498 462 ntBASIC6.41□□□□□ -1.38
Trim43aQ3TL54 AC154755.1-201ENSMUST00000225244 537 ntBASIC6.41□□□□□ -1.38
Trim43aQ3TL54 Vmn1r74-201ENSMUST00000050416 915 ntAPPRIS P1 BASIC6.41□□□□□ -1.38
Trim43aQ3TL54 Olfr275-201ENSMUST00000095085 960 ntAPPRIS P1 BASIC6.41□□□□□ -1.38
Trim43aQ3TL54 Olfr1312-201ENSMUST00000099600 954 ntAPPRIS P1 BASIC6.41□□□□□ -1.38
Trim43aQ3TL54 Vmn1r33-202ENSMUST00000227418 2414 ntAPPRIS P1 BASIC6.41□□□□□ -1.38
Trim43aQ3TL54 Gm9575-201ENSMUST00000122140 1339 ntBASIC6.41□□□□□ -1.38
Trim43aQ3TL54 Vmn1r89-207ENSMUST00000227390 1348 ntAPPRIS ALT2 BASIC6.41□□□□□ -1.38
Trim43aQ3TL54 Cntnap2-202ENSMUST00000114641 9827 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
Trim43aQ3TL54 Ckap5-203ENSMUST00000111337 6384 ntTSL 5 BASIC6.41□□□□□ -1.38
Trim43aQ3TL54 Gtdc1-203ENSMUST00000112810 2564 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
Trim43aQ3TL54 Xpr1-201ENSMUST00000027741 7492 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
Trim43aQ3TL54 Hnf4g-202ENSMUST00000108394 2327 ntAPPRIS ALT2 TSL 5 BASIC6.41□□□□□ -1.38
Trim43aQ3TL54 Bcap29-202ENSMUST00000177962 6155 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
Trim43aQ3TL54 Psg28-201ENSMUST00000019291 1949 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
Trim43aQ3TL54 E330034G19Rik-203ENSMUST00000161740 1544 ntAPPRIS P2 TSL 1 (best) BASIC6.4□□□□□ -1.38
Trim43aQ3TL54 Map7d3-201ENSMUST00000114766 2891 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
Trim43aQ3TL54 Mug1-201ENSMUST00000032228 4657 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
Trim43aQ3TL54 Gm11516-201ENSMUST00000118450 1582 ntBASIC6.4□□□□□ -1.38
Trim43aQ3TL54 Tet1-206ENSMUST00000174189 14369 ntAPPRIS ALT2 TSL 5 BASIC6.4□□□□□ -1.38
Trim43aQ3TL54 Gm42715-201ENSMUST00000189629 12746 ntAPPRIS P5 TSL 5 BASIC6.4□□□□□ -1.38
Trim43aQ3TL54 Fancd2-201ENSMUST00000036340 5512 ntAPPRIS P3 TSL 1 (best) BASIC6.4□□□□□ -1.38
Trim43aQ3TL54 Bclaf1-203ENSMUST00000185800 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC6.4□□□□□ -1.38
Trim43aQ3TL54 Myo3b-201ENSMUST00000060208 6256 ntAPPRIS P2 TSL 5 BASIC6.4□□□□□ -1.38
Trim43aQ3TL54 Gm13176-201ENSMUST00000117910 477 ntBASIC6.4□□□□□ -1.38
Trim43aQ3TL54 Gm12565-201ENSMUST00000119004 649 ntBASIC6.4□□□□□ -1.38
Trim43aQ3TL54 Gm11990-201ENSMUST00000121505 897 ntBASIC6.4□□□□□ -1.38
Trim43aQ3TL54 Mir1900-201ENSMUST00000122714 78 ntBASIC6.4□□□□□ -1.38
Trim43aQ3TL54 Gm5430-201ENSMUST00000182525 915 ntBASIC6.4□□□□□ -1.38
Trim43aQ3TL54 Snhg14-205ENSMUST00000186345 456 ntTSL 5 BASIC6.4□□□□□ -1.38
Trim43aQ3TL54 Gm28269-201ENSMUST00000189511 559 ntAPPRIS P1 TSL 3 BASIC6.4□□□□□ -1.38
Trim43aQ3TL54 Gm37358-201ENSMUST00000195492 479 ntBASIC6.4□□□□□ -1.38
Trim43aQ3TL54 Gm43467-201ENSMUST00000197441 437 ntBASIC6.4□□□□□ -1.38
Trim43aQ3TL54 Gm45609-206ENSMUST00000210176 1023 ntTSL 5 BASIC6.4□□□□□ -1.38
Trim43aQ3TL54 Olfr1240-201ENSMUST00000215362 1074 ntAPPRIS P1 BASIC6.4□□□□□ -1.38
Trim43aQ3TL54 Ss18l2-205ENSMUST00000215833 479 ntTSL 3 BASIC6.4□□□□□ -1.38
Trim43aQ3TL54 AC153936.1-201ENSMUST00000219874 395 ntBASIC6.4□□□□□ -1.38
Trim43aQ3TL54 Gm18955-201ENSMUST00000223173 649 ntBASIC6.4□□□□□ -1.38
Trim43aQ3TL54 CT010453.2-201ENSMUST00000227005 483 ntBASIC6.4□□□□□ -1.38
Trim43aQ3TL54 AC154563.1-201ENSMUST00000228317 442 ntBASIC6.4□□□□□ -1.38
Trim43aQ3TL54 Uqcrh-ps1-201ENSMUST00000038391 270 ntBASIC6.4□□□□□ -1.38
Trim43aQ3TL54 Cd160-201ENSMUST00000047702 1121 ntAPPRIS P3 TSL 1 (best) BASIC6.4□□□□□ -1.38
Trim43aQ3TL54 Olfr1404-201ENSMUST00000056592 1034 ntAPPRIS P1 BASIC6.4□□□□□ -1.38
Trim43aQ3TL54 Olfr930-201ENSMUST00000058789 1101 ntAPPRIS P1 BASIC6.4□□□□□ -1.38
Trim43aQ3TL54 Nme5-201ENSMUST00000079287 843 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
Trim43aQ3TL54 n-R5s65-201ENSMUST00000082614 117 ntBASIC6.4□□□□□ -1.38
Trim43aQ3TL54 Olfr687-201ENSMUST00000098154 938 ntBASIC6.4□□□□□ -1.38
Trim43aQ3TL54 Arhgap12-202ENSMUST00000077128 4431 ntAPPRIS ALT2 TSL 1 (best) BASIC6.4□□□□□ -1.38
Trim43aQ3TL54 D5Ertd577e-201ENSMUST00000094593 2462 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
Trim43aQ3TL54 Cyp2j6-201ENSMUST00000030303 3605 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
Trim43aQ3TL54 Sytl2-202ENSMUST00000107210 3718 ntAPPRIS ALT2 TSL 1 (best) BASIC6.4□□□□□ -1.39
Trim43aQ3TL54 Gm17751-201ENSMUST00000189132 2004 ntTSL 1 (best) BASIC6.4□□□□□ -1.39
Trim43aQ3TL54 Gm28472-202ENSMUST00000190133 1499 ntTSL 5 BASIC6.4□□□□□ -1.39
Trim43aQ3TL54 Gm28789-202ENSMUST00000190429 1499 ntTSL 5 BASIC6.4□□□□□ -1.39
Trim43aQ3TL54 Gje1-201ENSMUST00000020016 1480 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
Trim43aQ3TL54 Olfr281-202ENSMUST00000217517 4535 ntAPPRIS P1 TSL 5 BASIC6.4□□□□□ -1.39
Trim43aQ3TL54 Sgip1-202ENSMUST00000072481 3915 ntAPPRIS ALT2 TSL 1 (best) BASIC6.4□□□□□ -1.39
Trim43aQ3TL54 Gm14988-201ENSMUST00000117224 1548 ntBASIC6.4□□□□□ -1.39
Trim43aQ3TL54 Txndc9-201ENSMUST00000162031 3381 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
Trim43aQ3TL54 4922502D21Rik-201ENSMUST00000051283 1582 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
Trim43aQ3TL54 Atad2-208ENSMUST00000228783 3472 ntAPPRIS ALT2 BASIC6.4□□□□□ -1.39
Trim43aQ3TL54 Omd-202ENSMUST00000221170 2249 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
Trim43aQ3TL54 Gm37897-201ENSMUST00000192613 3561 ntBASIC6.39□□□□□ -1.39
Trim43aQ3TL54 Clca4b-201ENSMUST00000098549 2997 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
Trim43aQ3TL54 Lrrtm4-203ENSMUST00000126399 3050 ntAPPRIS ALT1 TSL 5 BASIC6.39□□□□□ -1.39
Trim43aQ3TL54 Gm19272-201ENSMUST00000184133 1753 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
Trim43aQ3TL54 Gm42507-201ENSMUST00000201187 2555 ntBASIC6.39□□□□□ -1.39
Trim43aQ3TL54 Mbtd1-204ENSMUST00000107852 1930 ntTSL 5 BASIC6.39□□□□□ -1.39
Trim43aQ3TL54 Igkv4-50-201ENSMUST00000103363 352 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
Trim43aQ3TL54 Trav14-3-201ENSMUST00000103589 384 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
Trim43aQ3TL54 Trav14n-3-201ENSMUST00000103635 280 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
Trim43aQ3TL54 Gm11462-201ENSMUST00000117749 562 ntBASIC6.39□□□□□ -1.39
Trim43aQ3TL54 Mup9-202ENSMUST00000118759 909 ntAPPRIS ALT2 TSL 5 BASIC6.39□□□□□ -1.39
Trim43aQ3TL54 Dnajc5b-203ENSMUST00000118968 806 ntAPPRIS P1 TSL 2 BASIC6.39□□□□□ -1.39
Trim43aQ3TL54 Gm6884-201ENSMUST00000119318 615 ntBASIC6.39□□□□□ -1.39
Trim43aQ3TL54 Gm8430-201ENSMUST00000119780 471 ntBASIC6.39□□□□□ -1.39
Trim43aQ3TL54 Gm2986-201ENSMUST00000121603 382 ntBASIC6.39□□□□□ -1.39
Trim43aQ3TL54 Mup9-204ENSMUST00000122381 864 ntAPPRIS P2 TSL 2 BASIC6.39□□□□□ -1.39
Trim43aQ3TL54 Gm13807-201ENSMUST00000137073 1295 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
Trim43aQ3TL54 4933401B06Rik-201ENSMUST00000139758 1155 ntBASIC6.39□□□□□ -1.39
Retrieved 100 of 76,532 protein–RNA pairs in 58.9 ms