Protein–RNA interactions for Protein: Q3MI99

Ccbe1, Collagen and calcium-binding EGF domain-containing protein 1, mousemouse

Predictions only

Length 408 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccbe1Q3MI99 Gm10165-201ENSMUST00000217666 2380 ntTSL 2 BASIC6.09□□□□□ -1.43
Ccbe1Q3MI99 Nrg1-203ENSMUST00000207470 5415 ntAPPRIS ALT2 TSL 1 (best) BASIC6.09□□□□□ -1.43
Ccbe1Q3MI99 Olfr491-202ENSMUST00000209545 1944 ntAPPRIS P1 TSL 5 BASIC6.09□□□□□ -1.44
Ccbe1Q3MI99 2210408I21Rik-202ENSMUST00000225605 1539 ntBASIC6.09□□□□□ -1.44
Ccbe1Q3MI99 Rrh-201ENSMUST00000029648 1506 ntAPPRIS ALT2 TSL 1 (best) BASIC6.09□□□□□ -1.44
Ccbe1Q3MI99 Ripk1-203ENSMUST00000167374 6472 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.44
Ccbe1Q3MI99 Lgi1-209ENSMUST00000199812 2262 ntTSL 5 BASIC6.09□□□□□ -1.44
Ccbe1Q3MI99 Rnase4-202ENSMUST00000169895 1460 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.44
Ccbe1Q3MI99 Stra6l-202ENSMUST00000107782 4009 ntAPPRIS ALT2 TSL 1 (best) BASIC6.09□□□□□ -1.44
Ccbe1Q3MI99 Gm44518-201ENSMUST00000208080 4370 ntBASIC6.09□□□□□ -1.44
Ccbe1Q3MI99 Gabrp-201ENSMUST00000020366 3280 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
Ccbe1Q3MI99 Hapln1-201ENSMUST00000022108 5715 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
Ccbe1Q3MI99 4933406G16Rik-201ENSMUST00000144854 1415 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
Ccbe1Q3MI99 Olfr348-202ENSMUST00000213498 3540 ntAPPRIS P1 TSL 3 BASIC6.08□□□□□ -1.44
Ccbe1Q3MI99 Pramel5-202ENSMUST00000105752 2060 ntAPPRIS P1 TSL 5 BASIC6.08□□□□□ -1.44
Ccbe1Q3MI99 Selenoi-203ENSMUST00000145167 6803 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
Ccbe1Q3MI99 Gm37250-201ENSMUST00000194919 2388 ntBASIC6.08□□□□□ -1.44
Ccbe1Q3MI99 Agl-203ENSMUST00000159742 4344 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
Ccbe1Q3MI99 Olfr390-202ENSMUST00000120081 3604 ntAPPRIS P1 TSL 2 BASIC6.08□□□□□ -1.44
Ccbe1Q3MI99 Smim9-201ENSMUST00000101433 706 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
Ccbe1Q3MI99 Mir708-201ENSMUST00000102189 109 ntBASIC6.08□□□□□ -1.44
Ccbe1Q3MI99 Gm24374-201ENSMUST00000104394 106 ntBASIC6.08□□□□□ -1.44
Ccbe1Q3MI99 Gm13878-201ENSMUST00000117986 577 ntBASIC6.08□□□□□ -1.44
Ccbe1Q3MI99 Gm2288-201ENSMUST00000118560 638 ntBASIC6.08□□□□□ -1.44
Ccbe1Q3MI99 Gm2318-201ENSMUST00000119623 639 ntBASIC6.08□□□□□ -1.44
Ccbe1Q3MI99 Gm14053-201ENSMUST00000121662 470 ntBASIC6.08□□□□□ -1.44
Ccbe1Q3MI99 Dnah2os-201ENSMUST00000124108 859 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
Ccbe1Q3MI99 Gm6081-201ENSMUST00000134472 489 ntBASIC6.08□□□□□ -1.44
Ccbe1Q3MI99 Rps12-ps9-201ENSMUST00000139165 399 ntBASIC6.08□□□□□ -1.44
Ccbe1Q3MI99 Gm14710-201ENSMUST00000146082 1066 ntBASIC6.08□□□□□ -1.44
Ccbe1Q3MI99 Gm12031-201ENSMUST00000156150 627 ntTSL 2 BASIC6.08□□□□□ -1.44
Ccbe1Q3MI99 Ggact-204ENSMUST00000161322 524 ntTSL 2 BASIC6.08□□□□□ -1.44
Ccbe1Q3MI99 Vmn1r29-201ENSMUST00000168416 1023 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
Ccbe1Q3MI99 Plac1-203ENSMUST00000174390 907 ntAPPRIS P1 TSL 3 BASIC6.08□□□□□ -1.44
Ccbe1Q3MI99 Gm7438-201ENSMUST00000177664 639 ntBASIC6.08□□□□□ -1.44
Ccbe1Q3MI99 Gm7408-201ENSMUST00000178014 639 ntBASIC6.08□□□□□ -1.44
Ccbe1Q3MI99 Gm7386-201ENSMUST00000178020 639 ntBASIC6.08□□□□□ -1.44
Ccbe1Q3MI99 Gm3657-201ENSMUST00000178170 639 ntBASIC6.08□□□□□ -1.44
Ccbe1Q3MI99 Gm7415-201ENSMUST00000178205 639 ntBASIC6.08□□□□□ -1.44
Ccbe1Q3MI99 Gm7398-201ENSMUST00000178589 639 ntBASIC6.08□□□□□ -1.44
Ccbe1Q3MI99 Gm7391-201ENSMUST00000178680 639 ntBASIC6.08□□□□□ -1.44
Ccbe1Q3MI99 Gm7375-201ENSMUST00000179232 639 ntBASIC6.08□□□□□ -1.44
Ccbe1Q3MI99 Gm3681-201ENSMUST00000179940 639 ntBASIC6.08□□□□□ -1.44
Ccbe1Q3MI99 Gm26570-201ENSMUST00000180672 342 ntBASIC6.08□□□□□ -1.44
Ccbe1Q3MI99 Gm5300-201ENSMUST00000182201 1003 ntBASIC6.08□□□□□ -1.44
Ccbe1Q3MI99 Gm5181-201ENSMUST00000183140 971 ntBASIC6.08□□□□□ -1.44
Ccbe1Q3MI99 Gm27755-201ENSMUST00000184623 132 ntBASIC6.08□□□□□ -1.44
Ccbe1Q3MI99 Gm7436-201ENSMUST00000187229 391 ntBASIC6.08□□□□□ -1.44
Ccbe1Q3MI99 Gm28494-201ENSMUST00000187687 562 ntTSL 5 BASIC6.08□□□□□ -1.44
Ccbe1Q3MI99 Olfr1215-201ENSMUST00000188399 943 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
Ccbe1Q3MI99 Gm28217-201ENSMUST00000188613 648 ntTSL 5 BASIC6.08□□□□□ -1.44
Ccbe1Q3MI99 Gm28501-201ENSMUST00000188729 421 ntTSL 2 BASIC6.08□□□□□ -1.44
Ccbe1Q3MI99 Gm43556-201ENSMUST00000196186 681 ntBASIC6.08□□□□□ -1.44
Ccbe1Q3MI99 1700021F02Rik-201ENSMUST00000197576 350 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
Ccbe1Q3MI99 Gm42808-201ENSMUST00000198212 285 ntTSL 5 BASIC6.08□□□□□ -1.44
Ccbe1Q3MI99 Mrps33-204ENSMUST00000201461 717 ntTSL 2 BASIC6.08□□□□□ -1.44
Ccbe1Q3MI99 Gm44232-201ENSMUST00000204537 225 ntBASIC6.08□□□□□ -1.44
Ccbe1Q3MI99 1810049I09Rik-201ENSMUST00000205499 453 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
Ccbe1Q3MI99 Gm45700-201ENSMUST00000205866 347 ntBASIC6.08□□□□□ -1.44
Ccbe1Q3MI99 Gm5027-201ENSMUST00000206700 375 ntBASIC6.08□□□□□ -1.44
Ccbe1Q3MI99 Olfr490-201ENSMUST00000210114 945 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
Ccbe1Q3MI99 Gm32005-201ENSMUST00000212446 959 ntTSL 5 BASIC6.08□□□□□ -1.44
Ccbe1Q3MI99 Gm45823-201ENSMUST00000212714 515 ntTSL 5 BASIC6.08□□□□□ -1.44
Ccbe1Q3MI99 AC132474.3-201ENSMUST00000213244 383 ntTSL 5 BASIC6.08□□□□□ -1.44
Ccbe1Q3MI99 AC126554.4-201ENSMUST00000221055 409 ntBASIC6.08□□□□□ -1.44
Ccbe1Q3MI99 Gm18955-201ENSMUST00000223173 649 ntBASIC6.08□□□□□ -1.44
Ccbe1Q3MI99 AC136376.1-201ENSMUST00000228496 950 ntBASIC6.08□□□□□ -1.44
Ccbe1Q3MI99 Olfr49-201ENSMUST00000059996 1030 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
Ccbe1Q3MI99 Cd48-202ENSMUST00000068584 1186 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
Ccbe1Q3MI99 Gm13769-201ENSMUST00000077123 930 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
Ccbe1Q3MI99 Gm23238-201ENSMUST00000083007 164 ntBASIC6.08□□□□□ -1.44
Ccbe1Q3MI99 Olfr1133-201ENSMUST00000099855 942 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
Ccbe1Q3MI99 Adgrl3-203ENSMUST00000117253 4764 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
Ccbe1Q3MI99 Gm14857-201ENSMUST00000117862 3185 ntBASIC6.08□□□□□ -1.44
Ccbe1Q3MI99 4933430A20Rik-201ENSMUST00000210943 1558 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
Ccbe1Q3MI99 Gm43031-201ENSMUST00000198500 1887 ntBASIC6.08□□□□□ -1.44
Ccbe1Q3MI99 Gm43891-201ENSMUST00000205132 3112 ntBASIC6.08□□□□□ -1.44
Ccbe1Q3MI99 AC154682.1-201ENSMUST00000225871 3124 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
Ccbe1Q3MI99 Errfi1-202ENSMUST00000073600 3036 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
Ccbe1Q3MI99 Smc5-201ENSMUST00000087556 5683 ntAPPRIS ALT2 TSL 1 (best) BASIC6.08□□□□□ -1.44
Ccbe1Q3MI99 Gabrg1-201ENSMUST00000031119 4771 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
Ccbe1Q3MI99 Plcb1-201ENSMUST00000070724 3853 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
Ccbe1Q3MI99 Foxp2-201ENSMUST00000031545 5647 ntAPPRIS P3 TSL 1 (best) BASIC6.08□□□□□ -1.44
Ccbe1Q3MI99 Stk4-202ENSMUST00000088291 4098 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
Ccbe1Q3MI99 Clock-204ENSMUST00000202122 5508 ntAPPRIS ALT2 TSL 1 (best) BASIC6.08□□□□□ -1.44
Ccbe1Q3MI99 Stk32a-201ENSMUST00000045477 3765 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
Ccbe1Q3MI99 Dlg2-204ENSMUST00000107196 7490 ntAPPRIS P2 TSL 1 (best) BASIC6.08□□□□□ -1.44
Ccbe1Q3MI99 Gm14496-201ENSMUST00000071760 2550 ntAPPRIS P1 TSL 5 BASIC6.08□□□□□ -1.44
Ccbe1Q3MI99 Gm4513-201ENSMUST00000207881 1438 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
Ccbe1Q3MI99 Gm4565-201ENSMUST00000208134 1438 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
Ccbe1Q3MI99 Pcdh15-217ENSMUST00000134009 3300 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
Ccbe1Q3MI99 Nmur2-201ENSMUST00000037682 3302 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
Ccbe1Q3MI99 4921534H16Rik-201ENSMUST00000162370 1392 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
Ccbe1Q3MI99 Gm3286-203ENSMUST00000201629 1945 ntAPPRIS P3 TSL 3 BASIC6.07□□□□□ -1.44
Ccbe1Q3MI99 Gimap9-201ENSMUST00000054050 1384 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
Ccbe1Q3MI99 Glyat-202ENSMUST00000119960 3296 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
Ccbe1Q3MI99 Gm15478-201ENSMUST00000145914 2172 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
Ccbe1Q3MI99 Vmn1r79-202ENSMUST00000226953 5636 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
Ccbe1Q3MI99 Olfr390-204ENSMUST00000215161 3740 ntAPPRIS P1 TSL 5 BASIC6.07□□□□□ -1.44
Ccbe1Q3MI99 Ankrd66-201ENSMUST00000178772 1321 ntAPPRIS P1 TSL 5 BASIC6.07□□□□□ -1.44
Retrieved 100 of 76,532 protein–RNA pairs in 84.4 ms