Protein–RNA interactions for Protein: Q07563

Col17a1, Collagen alpha-1(XVII) chain, mousemouse

Predictions only

Length 1,470 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col17a1Q07563 Gm10373-201ENSMUST00000100683 668 ntTSL 2 BASIC9.43□□□□□ -0.9
Col17a1Q07563 Gm11008-201ENSMUST00000109032 622 ntTSL 5 BASIC9.43□□□□□ -0.9
Col17a1Q07563 Gm25389-201ENSMUST00000157340 286 ntBASIC9.43□□□□□ -0.9
Col17a1Q07563 Mir199b-201ENSMUST00000175066 110 ntBASIC9.43□□□□□ -0.9
Col17a1Q07563 Gm28179-202ENSMUST00000189029 327 ntTSL 5 BASIC9.43□□□□□ -0.9
Col17a1Q07563 Gm28532-201ENSMUST00000190408 572 ntTSL 5 BASIC9.43□□□□□ -0.9
Col17a1Q07563 Rps27-206ENSMUST00000197361 329 ntTSL 3 BASIC9.43□□□□□ -0.9
Col17a1Q07563 Gm31211-201ENSMUST00000199170 253 ntBASIC9.43□□□□□ -0.9
Col17a1Q07563 Gm20586-201ENSMUST00000210122 547 ntBASIC9.43□□□□□ -0.9
Col17a1Q07563 AC124742.1-201ENSMUST00000219909 547 ntTSL 3 BASIC9.43□□□□□ -0.9
Col17a1Q07563 AC101709.1-201ENSMUST00000220276 909 ntTSL 5 BASIC9.43□□□□□ -0.9
Col17a1Q07563 AC183096.1-201ENSMUST00000226392 130 ntBASIC9.43□□□□□ -0.9
Col17a1Q07563 AC154738.7-201ENSMUST00000228606 579 ntBASIC9.43□□□□□ -0.9
Col17a1Q07563 Olfr459-201ENSMUST00000050412 1109 ntAPPRIS P1 BASIC9.43□□□□□ -0.9
Col17a1Q07563 Olfr1404-201ENSMUST00000056592 1034 ntAPPRIS P1 BASIC9.43□□□□□ -0.9
Col17a1Q07563 Gm7887-201ENSMUST00000056948 537 ntBASIC9.43□□□□□ -0.9
Col17a1Q07563 Pla2g12a-202ENSMUST00000061165 476 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Col17a1Q07563 F730035P03Rik-201ENSMUST00000065741 917 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Col17a1Q07563 Gm22350-201ENSMUST00000083924 156 ntBASIC9.43□□□□□ -0.9
Col17a1Q07563 Gk-202ENSMUST00000113978 4279 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Col17a1Q07563 Csnk1g1-213ENSMUST00000206528 1740 ntTSL 5 BASIC9.43□□□□□ -0.9
Col17a1Q07563 AC164978.1-201ENSMUST00000228608 4011 ntBASIC9.43□□□□□ -0.9
Col17a1Q07563 AC154461.6-201ENSMUST00000224815 2630 ntBASIC9.43□□□□□ -0.9
Col17a1Q07563 Olfr733-202ENSMUST00000214372 3530 ntAPPRIS P1 TSL 5 BASIC9.43□□□□□ -0.9
Col17a1Q07563 Gm5925-201ENSMUST00000105016 1497 ntBASIC9.43□□□□□ -0.9
Col17a1Q07563 Igf1r-201ENSMUST00000005671 11409 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Col17a1Q07563 AC162936.1-201ENSMUST00000223676 2368 ntBASIC9.43□□□□□ -0.9
Col17a1Q07563 Fbxl5-203ENSMUST00000114047 2762 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Col17a1Q07563 Olfr10-202ENSMUST00000217290 2776 ntAPPRIS P1 TSL 5 BASIC9.43□□□□□ -0.9
Col17a1Q07563 Gm17638-201ENSMUST00000181255 4343 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Col17a1Q07563 Entpd5-201ENSMUST00000021662 4931 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Col17a1Q07563 Zfp521-201ENSMUST00000025288 6152 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Col17a1Q07563 Slc15a1-201ENSMUST00000088386 3121 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Col17a1Q07563 Cd209b-201ENSMUST00000084086 2039 ntAPPRIS P4 TSL 1 (best) BASIC9.43□□□□□ -0.9
Col17a1Q07563 Gm38085-201ENSMUST00000195785 3062 ntBASIC9.43□□□□□ -0.9
Col17a1Q07563 Ryr1-208ENSMUST00000214374 15300 ntAPPRIS ALT2 TSL 5 BASIC9.43□□□□□ -0.9
Col17a1Q07563 Bbx-208ENSMUST00000138166 8743 ntAPPRIS P3 TSL 1 (best) BASIC9.43□□□□□ -0.9
Col17a1Q07563 Gtf2h1-202ENSMUST00000107644 2187 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Col17a1Q07563 4933400C23Rik-201ENSMUST00000188610 1708 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Col17a1Q07563 Cfap46-202ENSMUST00000129990 8180 ntAPPRIS P1 TSL 5 BASIC9.42□□□□□ -0.9
Col17a1Q07563 4833423E24Rik-201ENSMUST00000099923 2272 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Col17a1Q07563 Gm9085-201ENSMUST00000119994 1072 ntBASIC9.42□□□□□ -0.9
Col17a1Q07563 Gm7609-204ENSMUST00000161424 461 ntBASIC9.42□□□□□ -0.9
Col17a1Q07563 V1rg10-201ENSMUST00000183378 937 ntBASIC9.42□□□□□ -0.9
Col17a1Q07563 Gm33248-202ENSMUST00000206954 486 ntTSL 5 BASIC9.42□□□□□ -0.9
Col17a1Q07563 AC159208.1-201ENSMUST00000221403 649 ntBASIC9.42□□□□□ -0.9
Col17a1Q07563 AC129597.1-201ENSMUST00000223046 1234 ntBASIC9.42□□□□□ -0.9
Col17a1Q07563 Rpl21-ps4-201ENSMUST00000080237 438 ntBASIC9.42□□□□□ -0.9
Col17a1Q07563 Pard3-220ENSMUST00000162456 3204 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Col17a1Q07563 Gm5177-202ENSMUST00000183337 3785 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Col17a1Q07563 AC133076.2-201ENSMUST00000227678 3532 ntBASIC9.42□□□□□ -0.9
Col17a1Q07563 Cyld-201ENSMUST00000043526 8022 ntAPPRIS ALT1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Col17a1Q07563 A230108P19Rik-201ENSMUST00000151782 2500 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Col17a1Q07563 AC156025.2-201ENSMUST00000225907 1533 ntBASIC9.42□□□□□ -0.9
Col17a1Q07563 Adam28-201ENSMUST00000022642 3110 ntAPPRIS P4 TSL 1 (best) BASIC9.42□□□□□ -0.9
Col17a1Q07563 AC135119.1-202ENSMUST00000228435 2203 ntBASIC9.42□□□□□ -0.9
Col17a1Q07563 Mbnl1-211ENSMUST00000192807 2906 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Col17a1Q07563 Plch1-201ENSMUST00000048134 6259 ntAPPRIS ALT2 TSL 1 (best) BASIC9.42□□□□□ -0.9
Col17a1Q07563 Gabrq-201ENSMUST00000033711 2000 ntAPPRIS P3 TSL 1 (best) BASIC9.42□□□□□ -0.9
Col17a1Q07563 Ube4a-202ENSMUST00000117549 3415 ntAPPRIS P1 TSL 5 BASIC9.42□□□□□ -0.9
Col17a1Q07563 Gm43876-201ENSMUST00000203831 3229 ntBASIC9.42□□□□□ -0.9
Col17a1Q07563 Zfp27-202ENSMUST00000159920 3381 ntAPPRIS P1 TSL 5 BASIC9.41□□□□□ -0.9
Col17a1Q07563 Olfr6-201ENSMUST00000040983 6834 ntAPPRIS P1 TSL 5 BASIC9.41□□□□□ -0.9
Col17a1Q07563 AC152922.2-201ENSMUST00000213353 3879 ntBASIC9.41□□□□□ -0.9
Col17a1Q07563 Fam160a2-208ENSMUST00000179474 10853 ntAPPRIS P3 TSL 1 (best) BASIC9.41□□□□□ -0.9
Col17a1Q07563 Olfr363-ps-201ENSMUST00000119049 254 ntBASIC9.41□□□□□ -0.9
Col17a1Q07563 Vmn1r-ps8-201ENSMUST00000177200 838 ntBASIC9.41□□□□□ -0.9
Col17a1Q07563 Prp2-202ENSMUST00000178961 951 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Col17a1Q07563 1110046J04Rik-203ENSMUST00000181800 777 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Col17a1Q07563 Mir409-201ENSMUST00000198153 79 ntBASIC9.41□□□□□ -0.9
Col17a1Q07563 Gm44307-201ENSMUST00000204466 764 ntBASIC9.41□□□□□ -0.9
Col17a1Q07563 1700129C05Rik-201ENSMUST00000022548 1067 ntAPPRIS P2 TSL 1 (best) BASIC9.41□□□□□ -0.9
Col17a1Q07563 AC154252.1-201ENSMUST00000226041 473 ntBASIC9.41□□□□□ -0.9
Col17a1Q07563 Gm43190-201ENSMUST00000187850 1779 ntBASIC9.41□□□□□ -0.9
Col17a1Q07563 Cx3cr1-201ENSMUST00000064165 3753 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Col17a1Q07563 Osbpl9-219ENSMUST00000194478 2903 ntTSL 5 BASIC9.41□□□□□ -0.9
Col17a1Q07563 Plb1-201ENSMUST00000101376 4699 ntAPPRIS P1 TSL 5 BASIC9.41□□□□□ -0.9
Col17a1Q07563 Gm15232-201ENSMUST00000146929 2318 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Col17a1Q07563 Pet2-201ENSMUST00000113959 4183 ntAPPRIS P1 TSL 5 BASIC9.41□□□□□ -0.9
Col17a1Q07563 Pet2-202ENSMUST00000113960 4182 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Col17a1Q07563 Muc15-201ENSMUST00000090332 1318 ntAPPRIS P1 TSL 5 BASIC9.41□□□□□ -0.9
Col17a1Q07563 Ccp110-201ENSMUST00000038650 4716 ntAPPRIS P1 TSL 5 BASIC9.41□□□□□ -0.9
Col17a1Q07563 Slc4a4-203ENSMUST00000130041 3335 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Col17a1Q07563 Slc12a6-202ENSMUST00000053666 6060 ntAPPRIS ALT1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Col17a1Q07563 Gm42490-201ENSMUST00000198595 2064 ntBASIC9.41□□□□□ -0.9
Col17a1Q07563 B020004C17Rik-201ENSMUST00000178161 2385 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Col17a1Q07563 Tenm4-201ENSMUST00000107162 11021 ntAPPRIS ALT2 TSL 1 (best) BASIC9.41□□□□□ -0.9
Col17a1Q07563 Med1-201ENSMUST00000018304 5845 ntAPPRIS P3 TSL 1 (best) BASIC9.41□□□□□ -0.9
Col17a1Q07563 Gm11743-201ENSMUST00000117385 1735 ntBASIC9.4□□□□□ -0.9
Col17a1Q07563 Gm21693-202ENSMUST00000186047 1576 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Col17a1Q07563 Gm3376-202ENSMUST00000186140 1576 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Col17a1Q07563 Gm21704-202ENSMUST00000187277 1576 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Col17a1Q07563 Gm10352-202ENSMUST00000187842 1576 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Col17a1Q07563 Gm21677-202ENSMUST00000189592 1576 ntAPPRIS P1 TSL 5 BASIC9.4□□□□□ -0.9
Col17a1Q07563 Igkv6-14-201ENSMUST00000103394 347 ntAPPRIS P1 BASIC9.4□□□□□ -0.9
Col17a1Q07563 Gm13023-202ENSMUST00000105770 833 ntAPPRIS ALT2 TSL 2 BASIC9.4□□□□□ -0.9
Col17a1Q07563 Rps11-ps3-201ENSMUST00000117608 486 ntBASIC9.4□□□□□ -0.9
Col17a1Q07563 Gm8534-201ENSMUST00000118553 766 ntBASIC9.4□□□□□ -0.9
Col17a1Q07563 Gm14434-201ENSMUST00000120521 559 ntTSL 3 BASIC9.4□□□□□ -0.9
Col17a1Q07563 Gm12602-202ENSMUST00000154352 707 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Retrieved 100 of 76,532 protein–RNA pairs in 82 ms