Protein–RNA interactions for Protein: Q03358

Msx2, Homeobox protein MSX-2, mousemouse

Predictions only

Length 267 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msx2Q03358 AC129308.2-203ENSMUST00000224109 2385 ntBASIC6.58□□□□□ -1.36
Msx2Q03358 Gm38105-201ENSMUST00000192112 2621 ntBASIC6.58□□□□□ -1.36
Msx2Q03358 Ttc41-201ENSMUST00000061458 1815 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
Msx2Q03358 Tcaf3-201ENSMUST00000069023 3110 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
Msx2Q03358 Gm42894-201ENSMUST00000200788 3390 ntBASIC6.58□□□□□ -1.36
Msx2Q03358 Gm37530-201ENSMUST00000191759 4932 ntBASIC6.58□□□□□ -1.36
Msx2Q03358 Gm15232-201ENSMUST00000146929 2318 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
Msx2Q03358 1810064F22Rik-203ENSMUST00000188595 2307 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
Msx2Q03358 Zfp607b-202ENSMUST00000120004 4612 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
Msx2Q03358 Trappc1-202ENSMUST00000102601 759 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
Msx2Q03358 Gm17184-201ENSMUST00000111864 462 ntBASIC6.58□□□□□ -1.36
Msx2Q03358 Eif2s3x-202ENSMUST00000113922 1103 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
Msx2Q03358 Cd200r3-204ENSMUST00000114612 731 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
Msx2Q03358 Gm16383-201ENSMUST00000118122 232 ntBASIC6.58□□□□□ -1.36
Msx2Q03358 Gm11833-201ENSMUST00000118393 853 ntBASIC6.58□□□□□ -1.36
Msx2Q03358 Gm12740-201ENSMUST00000118794 308 ntBASIC6.58□□□□□ -1.36
Msx2Q03358 Gm13130-201ENSMUST00000119195 1166 ntBASIC6.58□□□□□ -1.36
Msx2Q03358 Gm12375-201ENSMUST00000119331 921 ntBASIC6.58□□□□□ -1.36
Msx2Q03358 Gm16463-201ENSMUST00000120527 721 ntBASIC6.58□□□□□ -1.36
Msx2Q03358 Gm13000-201ENSMUST00000120937 496 ntBASIC6.58□□□□□ -1.36
Msx2Q03358 Rapgef4os1-201ENSMUST00000126462 638 ntTSL 3 BASIC6.58□□□□□ -1.36
Msx2Q03358 4930483K19Rik-201ENSMUST00000127576 1237 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
Msx2Q03358 Gm3160-201ENSMUST00000128343 607 ntBASIC6.58□□□□□ -1.36
Msx2Q03358 Gm27192-201ENSMUST00000136428 581 ntTSL 3 BASIC6.58□□□□□ -1.36
Msx2Q03358 Rpl36-ps2-201ENSMUST00000136893 311 ntBASIC6.58□□□□□ -1.36
Msx2Q03358 Gm10721-201ENSMUST00000143083 669 ntAPPRIS P1 TSL 5 BASIC6.58□□□□□ -1.36
Msx2Q03358 Gm10715-201ENSMUST00000155807 675 ntAPPRIS ALT2 TSL 5 BASIC6.58□□□□□ -1.36
Msx2Q03358 Gm25455-201ENSMUST00000157946 325 ntBASIC6.58□□□□□ -1.36
Msx2Q03358 Gm3221-201ENSMUST00000164869 440 ntBASIC6.58□□□□□ -1.36
Msx2Q03358 Gm17521-201ENSMUST00000165345 468 ntAPPRIS P1 BASIC6.58□□□□□ -1.36
Msx2Q03358 Gm3208-201ENSMUST00000168281 427 ntBASIC6.58□□□□□ -1.36
Msx2Q03358 Gm8895-201ENSMUST00000172300 1223 ntBASIC6.58□□□□□ -1.36
Msx2Q03358 Vmn1r-ps148-201ENSMUST00000176775 455 ntBASIC6.58□□□□□ -1.36
Msx2Q03358 Obox3-ps3-201ENSMUST00000177242 1004 ntBASIC6.58□□□□□ -1.36
Msx2Q03358 Gm21909-201ENSMUST00000178260 439 ntBASIC6.58□□□□□ -1.36
Msx2Q03358 Gm17535-201ENSMUST00000178641 672 ntAPPRIS P1 TSL 5 BASIC6.58□□□□□ -1.36
Msx2Q03358 Gm11168-204ENSMUST00000179881 672 ntAPPRIS ALT2 TSL 5 BASIC6.58□□□□□ -1.36
Msx2Q03358 Gm26652-202ENSMUST00000181672 475 ntBASIC6.58□□□□□ -1.36
Msx2Q03358 Prl8a8-201ENSMUST00000018389 927 ntAPPRIS P3 TSL 1 (best) BASIC6.58□□□□□ -1.36
Msx2Q03358 1810022K09Rik-203ENSMUST00000185423 278 ntTSL 3 BASIC6.58□□□□□ -1.36
Msx2Q03358 1700066B17Rik-202ENSMUST00000187091 675 ntTSL 3 BASIC6.58□□□□□ -1.36
Msx2Q03358 Gm29641-201ENSMUST00000188955 259 ntBASIC6.58□□□□□ -1.36
Msx2Q03358 Gm28655-201ENSMUST00000191538 692 ntBASIC6.58□□□□□ -1.36
Msx2Q03358 Gm7412-201ENSMUST00000191692 605 ntBASIC6.58□□□□□ -1.36
Msx2Q03358 Gm9236-201ENSMUST00000196892 587 ntBASIC6.58□□□□□ -1.36
Msx2Q03358 Gm43140-201ENSMUST00000197317 456 ntTSL 2 BASIC6.58□□□□□ -1.36
Msx2Q03358 Gm5547-203ENSMUST00000200182 683 ntTSL 5 BASIC6.58□□□□□ -1.36
Msx2Q03358 Gm44786-201ENSMUST00000208165 1008 ntTSL 5 BASIC6.58□□□□□ -1.36
Msx2Q03358 Olfr1134-203ENSMUST00000213939 1015 ntAPPRIS P1 BASIC6.58□□□□□ -1.36
Msx2Q03358 AC156504.1-201ENSMUST00000214608 157 ntBASIC6.58□□□□□ -1.36
Msx2Q03358 AC131795.1-201ENSMUST00000219632 426 ntBASIC6.58□□□□□ -1.36
Msx2Q03358 Rpl29-ps2-202ENSMUST00000220540 1165 ntTSL 5 BASIC6.58□□□□□ -1.36
Msx2Q03358 AC154323.2-201ENSMUST00000226557 1151 ntBASIC6.58□□□□□ -1.36
Msx2Q03358 AC163295.1-201ENSMUST00000227840 314 ntBASIC6.58□□□□□ -1.36
Msx2Q03358 Scrg1-201ENSMUST00000034023 700 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
Msx2Q03358 Vmn1r184-201ENSMUST00000057123 945 ntAPPRIS P1 BASIC6.58□□□□□ -1.36
Msx2Q03358 Olfr933-201ENSMUST00000075680 1003 ntAPPRIS P1 BASIC6.58□□□□□ -1.36
Msx2Q03358 Olfr191-201ENSMUST00000078517 930 ntAPPRIS P1 BASIC6.58□□□□□ -1.36
Msx2Q03358 Defb4-201ENSMUST00000081017 454 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
Msx2Q03358 Gm25475-201ENSMUST00000082825 180 ntBASIC6.58□□□□□ -1.36
Msx2Q03358 Olfr18-201ENSMUST00000086473 1156 ntAPPRIS P2 TSL 1 (best) BASIC6.58□□□□□ -1.36
Msx2Q03358 Gm10718-201ENSMUST00000099046 681 ntAPPRIS P1 TSL 5 BASIC6.58□□□□□ -1.36
Msx2Q03358 Vmn1r11-202ENSMUST00000226968 2522 ntAPPRIS P2 BASIC6.58□□□□□ -1.36
Msx2Q03358 Helz-203ENSMUST00000106746 13147 ntAPPRIS ALT2 TSL 5 BASIC6.58□□□□□ -1.36
Msx2Q03358 Tek-203ENSMUST00000102798 4654 ntAPPRIS P3 TSL 1 (best) BASIC6.58□□□□□ -1.36
Msx2Q03358 Olfr1049-202ENSMUST00000216185 1471 ntAPPRIS P1 TSL 5 BASIC6.58□□□□□ -1.36
Msx2Q03358 Olfr1426-201ENSMUST00000112952 2697 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
Msx2Q03358 Olfr62-203ENSMUST00000217013 2654 ntAPPRIS P1 TSL 5 BASIC6.58□□□□□ -1.36
Msx2Q03358 Gm43775-201ENSMUST00000201019 3395 ntBASIC6.58□□□□□ -1.36
Msx2Q03358 Gm16568-201ENSMUST00000066038 1910 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
Msx2Q03358 Parp6-202ENSMUST00000050483 2631 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
Msx2Q03358 Gm43154-208ENSMUST00000209658 1442 ntTSL 5 BASIC6.58□□□□□ -1.36
Msx2Q03358 Zfp2-202ENSMUST00000109129 2803 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
Msx2Q03358 9930038B18Rik-201ENSMUST00000151816 3966 ntTSL 5 BASIC6.58□□□□□ -1.36
Msx2Q03358 Olfr1426-205ENSMUST00000219155 2503 ntAPPRIS P1 TSL 5 BASIC6.57□□□□□ -1.36
Msx2Q03358 Gm20716-201ENSMUST00000138667 5288 ntAPPRIS P1 TSL 2 BASIC6.57□□□□□ -1.36
Msx2Q03358 4930509K18Rik-201ENSMUST00000144039 1810 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
Msx2Q03358 Mgam-206ENSMUST00000202779 3821 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
Msx2Q03358 Npy2r-201ENSMUST00000029633 3364 ntAPPRIS P1 TSL 2 BASIC6.57□□□□□ -1.36
Msx2Q03358 Olfr401-202ENSMUST00000213754 2227 ntAPPRIS P1 TSL 5 BASIC6.57□□□□□ -1.36
Msx2Q03358 Akr1c20-202ENSMUST00000080361 1337 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
Msx2Q03358 Zfp748-202ENSMUST00000181892 5293 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
Msx2Q03358 Dlg1-206ENSMUST00000115205 4364 ntAPPRIS ALT2 TSL 1 (best) BASIC6.57□□□□□ -1.36
Msx2Q03358 Gm37010-201ENSMUST00000194539 1704 ntBASIC6.57□□□□□ -1.36
Msx2Q03358 Fancd2-208ENSMUST00000204827 4707 ntAPPRIS ALT2 TSL 1 (best) BASIC6.57□□□□□ -1.36
Msx2Q03358 Gm42606-201ENSMUST00000114209 239 ntBASIC6.57□□□□□ -1.36
Msx2Q03358 Clec4n-203ENSMUST00000117130 1136 ntAPPRIS ALT2 TSL 1 (best) BASIC6.57□□□□□ -1.36
Msx2Q03358 Gm11905-201ENSMUST00000117653 678 ntBASIC6.57□□□□□ -1.36
Msx2Q03358 Gm15739-201ENSMUST00000118049 872 ntBASIC6.57□□□□□ -1.36
Msx2Q03358 Gm14645-201ENSMUST00000118597 417 ntBASIC6.57□□□□□ -1.36
Msx2Q03358 Gm12944-201ENSMUST00000119262 463 ntBASIC6.57□□□□□ -1.36
Msx2Q03358 Chchd7-204ENSMUST00000119403 695 ntAPPRIS P1 TSL 2 BASIC6.57□□□□□ -1.36
Msx2Q03358 Gm14156-201ENSMUST00000121538 483 ntBASIC6.57□□□□□ -1.36
Msx2Q03358 Gm12770-201ENSMUST00000121734 462 ntBASIC6.57□□□□□ -1.36
Msx2Q03358 Gm6568-201ENSMUST00000122274 697 ntBASIC6.57□□□□□ -1.36
Msx2Q03358 Gm11998-201ENSMUST00000146304 972 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
Msx2Q03358 Gm13596-201ENSMUST00000153354 292 ntTSL 5 BASIC6.57□□□□□ -1.36
Msx2Q03358 Gm26159-201ENSMUST00000158968 104 ntBASIC6.57□□□□□ -1.36
Msx2Q03358 Gm3373-201ENSMUST00000169087 516 ntAPPRIS ALT2 TSL 1 (best) BASIC6.57□□□□□ -1.36
Msx2Q03358 Gm6061-201ENSMUST00000175860 492 ntBASIC6.57□□□□□ -1.36
Retrieved 100 of 76,532 protein–RNA pairs in 73.3 ms