Protein–RNA interactions for Protein: P97436

Nkx3-1, Homeobox protein Nkx-3.1, mousemouse

Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx3-1P97436 Nlrp1c-ps-201ENSMUST00000171546 3457 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
Nkx3-1P97436 Gm37078-201ENSMUST00000193314 2009 ntBASIC5.3□□□□□ -1.56
Nkx3-1P97436 Fanci-201ENSMUST00000036865 4645 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
Nkx3-1P97436 Gm18880-201ENSMUST00000223333 1541 ntBASIC5.3□□□□□ -1.56
Nkx3-1P97436 Olfr530-202ENSMUST00000216727 1958 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
Nkx3-1P97436 Gm13870-201ENSMUST00000117214 1023 ntBASIC5.3□□□□□ -1.56
Nkx3-1P97436 Gm13489-201ENSMUST00000121234 971 ntBASIC5.3□□□□□ -1.56
Nkx3-1P97436 Gm12399-201ENSMUST00000121475 446 ntBASIC5.3□□□□□ -1.56
Nkx3-1P97436 Gm11787-201ENSMUST00000121996 1050 ntBASIC5.3□□□□□ -1.56
Nkx3-1P97436 Gm12610-201ENSMUST00000139272 581 ntTSL 3 BASIC5.3□□□□□ -1.56
Nkx3-1P97436 Fundc1-203ENSMUST00000142638 597 ntTSL 3 BASIC5.3□□□□□ -1.56
Nkx3-1P97436 Gm15642-201ENSMUST00000148057 311 ntTSL 5 BASIC5.3□□□□□ -1.56
Nkx3-1P97436 Gm23662-201ENSMUST00000158046 111 ntBASIC5.3□□□□□ -1.56
Nkx3-1P97436 Gm23757-201ENSMUST00000158353 100 ntBASIC5.3□□□□□ -1.56
Nkx3-1P97436 B230118H07Rik-208ENSMUST00000160037 1139 ntAPPRIS P2 TSL 1 (best) BASIC5.3□□□□□ -1.56
Nkx3-1P97436 Gm3715-201ENSMUST00000172308 617 ntBASIC5.3□□□□□ -1.56
Nkx3-1P97436 Spint4-201ENSMUST00000017454 751 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
Nkx3-1P97436 Pantr1-203ENSMUST00000176154 514 ntTSL 5 BASIC5.3□□□□□ -1.56
Nkx3-1P97436 Vmn1r-ps12-201ENSMUST00000176946 502 ntBASIC5.3□□□□□ -1.56
Nkx3-1P97436 Gm24957-201ENSMUST00000179604 132 ntBASIC5.3□□□□□ -1.56
Nkx3-1P97436 Gm26653-201ENSMUST00000181537 1214 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
Nkx3-1P97436 Gm27849-201ENSMUST00000183673 125 ntBASIC5.3□□□□□ -1.56
Nkx3-1P97436 Gm29529-201ENSMUST00000187154 714 ntTSL 3 BASIC5.3□□□□□ -1.56
Nkx3-1P97436 Csf2-201ENSMUST00000019060 800 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
Nkx3-1P97436 Gm37477-201ENSMUST00000195215 884 ntBASIC5.3□□□□□ -1.56
Nkx3-1P97436 Trav3n-2-201ENSMUST00000197693 334 ntBASIC5.3□□□□□ -1.56
Nkx3-1P97436 Gm8929-201ENSMUST00000197781 1132 ntBASIC5.3□□□□□ -1.56
Nkx3-1P97436 Gm43215-201ENSMUST00000199108 252 ntBASIC5.3□□□□□ -1.56
Nkx3-1P97436 Trav3d-2-201ENSMUST00000199874 334 ntBASIC5.3□□□□□ -1.56
Nkx3-1P97436 Gm43646-201ENSMUST00000199962 464 ntTSL 3 BASIC5.3□□□□□ -1.56
Nkx3-1P97436 Spcs2-206ENSMUST00000208465 736 ntTSL 5 BASIC5.3□□□□□ -1.56
Nkx3-1P97436 AC140409.4-201ENSMUST00000215757 538 ntBASIC5.3□□□□□ -1.56
Nkx3-1P97436 Glipr1l3-201ENSMUST00000220085 892 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
Nkx3-1P97436 CT030645.3-201ENSMUST00000225483 1022 ntBASIC5.3□□□□□ -1.56
Nkx3-1P97436 AC154527.1-201ENSMUST00000225809 242 ntBASIC5.3□□□□□ -1.56
Nkx3-1P97436 AC116319.2-201ENSMUST00000228159 984 ntBASIC5.3□□□□□ -1.56
Nkx3-1P97436 Gm1604b-201ENSMUST00000089120 357 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
Nkx3-1P97436 Olfr994-201ENSMUST00000099925 945 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
Nkx3-1P97436 Gbp3-203ENSMUST00000106222 2629 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
Nkx3-1P97436 Gm28687-201ENSMUST00000187203 1494 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
Nkx3-1P97436 Gm29373-201ENSMUST00000190660 1494 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
Nkx3-1P97436 Ncr1-201ENSMUST00000006792 1463 ntAPPRIS P2 TSL 1 (best) BASIC5.3□□□□□ -1.56
Nkx3-1P97436 Dnm3os-201ENSMUST00000139662 7928 ntBASIC5.3□□□□□ -1.56
Nkx3-1P97436 Kcnj16-205ENSMUST00000178798 3678 ntAPPRIS P1 TSL 3 BASIC5.3□□□□□ -1.56
Nkx3-1P97436 Tlr11-202ENSMUST00000185091 3207 ntAPPRIS P2 TSL 2 BASIC5.3□□□□□ -1.56
Nkx3-1P97436 Gm43842-201ENSMUST00000202890 2982 ntBASIC5.3□□□□□ -1.56
Nkx3-1P97436 Gm11885-201ENSMUST00000118473 1428 ntBASIC5.3□□□□□ -1.56
Nkx3-1P97436 Wnk1-218ENSMUST00000161512 1426 ntBASIC5.3□□□□□ -1.56
Nkx3-1P97436 Vmn1r220-204ENSMUST00000227950 6238 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
Nkx3-1P97436 Zfp60-201ENSMUST00000042641 2727 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
Nkx3-1P97436 Olfr596-202ENSMUST00000214577 3392 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
Nkx3-1P97436 Adam21-201ENSMUST00000008582 2911 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
Nkx3-1P97436 Yae1d1-201ENSMUST00000099735 8744 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
Nkx3-1P97436 Golga1-202ENSMUST00000112850 4635 ntAPPRIS ALT2 TSL 1 (best) BASIC5.3□□□□□ -1.56
Nkx3-1P97436 Sytl4-203ENSMUST00000113297 3306 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
Nkx3-1P97436 Rfx4-205ENSMUST00000166696 3332 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
Nkx3-1P97436 Mgam2-ps-201ENSMUST00000195870 3745 ntBASIC5.3□□□□□ -1.56
Nkx3-1P97436 Vmn2r121-201ENSMUST00000094491 3062 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
Nkx3-1P97436 Olfr1381-202ENSMUST00000213256 4954 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
Nkx3-1P97436 AC152946.1-201ENSMUST00000218446 3474 ntTSL 5 BASIC5.29□□□□□ -1.56
Nkx3-1P97436 Gm5427-201ENSMUST00000217680 2591 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
Nkx3-1P97436 Olfr1246-204ENSMUST00000217254 5411 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
Nkx3-1P97436 Gm5799-201ENSMUST00000169023 1314 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
Nkx3-1P97436 Olfr1504-202ENSMUST00000209192 1514 ntAPPRIS P1 TSL 3 BASIC5.29□□□□□ -1.56
Nkx3-1P97436 Gm38248-201ENSMUST00000193744 5783 ntBASIC5.29□□□□□ -1.56
Nkx3-1P97436 Cnga1-201ENSMUST00000087213 2739 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
Nkx3-1P97436 Prom1-205ENSMUST00000165909 4089 ntAPPRIS ALT2 TSL 1 (best) BASIC5.29□□□□□ -1.56
Nkx3-1P97436 C730027H18Rik-202ENSMUST00000219822 3268 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
Nkx3-1P97436 Olfr510-202ENSMUST00000213979 2898 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
Nkx3-1P97436 Gm32122-201ENSMUST00000212119 2259 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
Nkx3-1P97436 Unc13c-201ENSMUST00000075245 6633 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
Nkx3-1P97436 Gm37902-201ENSMUST00000192839 1683 ntBASIC5.29□□□□□ -1.56
Nkx3-1P97436 Gm10062-201ENSMUST00000072180 1470 ntBASIC5.29□□□□□ -1.56
Nkx3-1P97436 Ighv1-20-201ENSMUST00000103506 348 ntAPPRIS ALT2 BASIC5.29□□□□□ -1.56
Nkx3-1P97436 Gm12874-201ENSMUST00000117190 913 ntBASIC5.29□□□□□ -1.56
Nkx3-1P97436 Gm13566-201ENSMUST00000117428 1142 ntBASIC5.29□□□□□ -1.56
Nkx3-1P97436 Olfr407-ps1-201ENSMUST00000117794 866 ntBASIC5.29□□□□□ -1.56
Nkx3-1P97436 Gm13469-201ENSMUST00000118231 350 ntBASIC5.29□□□□□ -1.56
Nkx3-1P97436 Gm13013-201ENSMUST00000119087 523 ntBASIC5.29□□□□□ -1.56
Nkx3-1P97436 Gm15801-201ENSMUST00000120920 522 ntBASIC5.29□□□□□ -1.56
Nkx3-1P97436 Sox5os3-202ENSMUST00000154167 765 ntTSL 3 BASIC5.29□□□□□ -1.56
Nkx3-1P97436 Gm22311-201ENSMUST00000158006 110 ntBASIC5.29□□□□□ -1.56
Nkx3-1P97436 Gm22724-201ENSMUST00000158091 127 ntBASIC5.29□□□□□ -1.56
Nkx3-1P97436 Gm22636-201ENSMUST00000158142 275 ntBASIC5.29□□□□□ -1.56
Nkx3-1P97436 Gm8783-201ENSMUST00000159764 522 ntBASIC5.29□□□□□ -1.56
Nkx3-1P97436 Naa60-210ENSMUST00000176224 501 ntTSL 5 BASIC5.29□□□□□ -1.56
Nkx3-1P97436 Pdzph1-203ENSMUST00000177360 950 ntTSL 5 BASIC5.29□□□□□ -1.56
Nkx3-1P97436 Gm27024-201ENSMUST00000182561 755 ntBASIC5.29□□□□□ -1.56
Nkx3-1P97436 Gm27167-201ENSMUST00000183752 511 ntTSL 3 BASIC5.29□□□□□ -1.56
Nkx3-1P97436 Gm37511-201ENSMUST00000192901 294 ntBASIC5.29□□□□□ -1.56
Nkx3-1P97436 Oaz3-204ENSMUST00000199678 935 ntAPPRIS ALT2 TSL 5 BASIC5.29□□□□□ -1.56
Nkx3-1P97436 Gm5990-201ENSMUST00000203126 746 ntBASIC5.29□□□□□ -1.56
Nkx3-1P97436 Gm34149-201ENSMUST00000203547 304 ntBASIC5.29□□□□□ -1.56
Nkx3-1P97436 Gm45196-201ENSMUST00000206751 825 ntBASIC5.29□□□□□ -1.56
Nkx3-1P97436 AC117245.2-201ENSMUST00000216943 570 ntTSL 5 BASIC5.29□□□□□ -1.56
Nkx3-1P97436 Olfr628-202ENSMUST00000218266 951 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
Nkx3-1P97436 Prl8a8-204ENSMUST00000224072 1128 ntAPPRIS ALT2 BASIC5.29□□□□□ -1.56
Nkx3-1P97436 Tas2r105-201ENSMUST00000053652 964 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
Nkx3-1P97436 Gm5582-201ENSMUST00000075251 522 ntBASIC5.29□□□□□ -1.56
Nkx3-1P97436 Olfr243-201ENSMUST00000098194 951 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
Retrieved 100 of 76,532 protein–RNA pairs in 58.8 ms